RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C SGS1P35187 1447 aa11.37□□□□□ -0.59
YPT1YFL038C INO80P53115 1489 aa11.12□□□□□ -0.63
YPT1YFL038C SPA2P23201 1466 aaKnown RBP11□□□□□ -0.65
YPT1YFL038C SSN2P38931 1420 aa10.92□□□□□ -0.66
YPT1YFL038C TCB3Q03640 1545 aaKnown RBP10.89□□□□□ -0.67
YPT1YFL038C TY1B-DR4Q07793 1604 aa10.71□□□□□ -0.69
YPT1YFL038C DRS1P32892 752 aaKnown RBP10.61□□□□□ -0.71
YPT1YFL038C HSL1P34244 1518 aa10.53□□□□□ -0.72
YPT1YFL038C MON2P48563 1636 aaPredicted RBP10.51□□□□□ -0.73
YPT1YFL038C SPT6P23615 1451 aaKnown RBP10.5□□□□□ -0.73
YPT1YFL038C SWR1Q05471 1514 aa10.38□□□□□ -0.75
YPT1YFL038C HIR3P47171 1648 aa10.36□□□□□ -0.75
YPT1YFL038C XRN1P22147 1528 aaKnown RBP10.32□□□□□ -0.76
YPT1YFL038C REV3P14284 1504 aa10.17□□□□□ -0.78
YPT1YFL038C SIN3P22579 1536 aa10.16□□□□□ -0.78
YPT1YFL038C THO2P53552 1597 aaKnown RBP10.12□□□□□ -0.79
YPT1YFL038C SSK2P53599 1579 aa10.08□□□□□ -0.8
YPT1YFL038C DNA2P38859 1522 aa10.02□□□□□ -0.81
YPT1YFL038C TAF2P23255 1407 aa10.01□□□□□ -0.81
YPT1YFL038C KOG1P38873 1557 aa10.01□□□□□ -0.81
YPT1YFL038C ESP1Q03018 1630 aa9.97□□□□□ -0.81
YPT1YFL038C BUD4P47136 1447 aa9.95□□□□□ -0.82
YPT1YFL038C CHD1P32657 1468 aa9.95□□□□□ -0.82
YPT1YFL038C MYO2P19524 1574 aaKnown RBP9.95□□□□□ -0.82
YPT1YFL038C SKI3P17883 1432 aaKnown RBP9.94□□□□□ -0.82
YPT1YFL038C ECM5Q03214 1411 aa9.9□□□□□ -0.82
YPT1YFL038C ATG2P53855 1592 aa9.88□□□□□ -0.83
YPT1YFL038C POL1P13382 1468 aa9.87□□□□□ -0.83
YPT1YFL038C MMS22Q06164 1454 aa9.85□□□□□ -0.83
YPT1YFL038C YPK9Q12697 1472 aa9.85□□□□□ -0.83
YPT1YFL038C YTA7P40340 1379 aa9.81□□□□□ -0.84
YPT1YFL038C STU1P38198 1513 aa9.81□□□□□ -0.84
YPT1YFL038C PEP1P32319 1579 aa9.79□□□□□ -0.84
YPT1YFL038C MDS3P53094 1487 aa9.73□□□□□ -0.85
YPT1YFL038C SCC2Q04002 1493 aa9.73□□□□□ -0.85
YPT1YFL038C RPO31P04051 1460 aa9.72□□□□□ -0.85
YPT1YFL038C YOR1P53049 1477 aa9.7□□□□□ -0.86
YPT1YFL038C RKR1Q04781 1562 aa9.69□□□□□ -0.86
YPT1YFL038C BPT1P14772 1559 aa9.67□□□□□ -0.86
YPT1YFL038C TOP2P06786 1428 aaKnown RBP9.66□□□□□ -0.86
YPT1YFL038C MYO4P32492 1471 aa9.66□□□□□ -0.86
YPT1YFL038C SMC4Q12267 1418 aa9.65□□□□□ -0.87
YPT1YFL038C UFD4P33202 1483 aa9.62□□□□□ -0.87
YPT1YFL038C YCF1P39109 1515 aaKnown RBP9.61□□□□□ -0.87
YPT1YFL038C SAS10Q12136 610 aaPredicted RBP9.61□□□□□ -0.87
YPT1YFL038C TAF7Q05021 590 aa9.57□□□□□ -0.88
YPT1YFL038C TY2B-LR1P0C2J3 1770 aa9.52□□□□□ -0.88
YPT1YFL038C TY2B-FP0CX63 1770 aa9.52□□□□□ -0.88
YPT1YFL038C TY2B-GR2P0CX64 1770 aa9.52□□□□□ -0.88
YPT1YFL038C TY2B-CP25384 1770 aa9.52□□□□□ -0.88
YPT1YFL038C TY2B-DR2Q03494 1770 aa9.52□□□□□ -0.88
YPT1YFL038C TY1B-DR1Q03855 1755 aa9.52□□□□□ -0.88
YPT1YFL038C TY2B-DR3Q07791 1770 aaKnown RBP9.52□□□□□ -0.88
YPT1YFL038C TY2B-OR1Q12113 1770 aa9.52□□□□□ -0.88
YPT1YFL038C TY2B-DR1Q12472 1770 aa9.52□□□□□ -0.88
YPT1YFL038C TY2B-OR2Q12501 1770 aa9.52□□□□□ -0.88
YPT1YFL038C SNQ2P32568 1501 aaKnown RBP9.51□□□□□ -0.89
YPT1YFL038C TRM732Q03496 1420 aa9.51□□□□□ -0.89
YPT1YFL038C TY1B-DR3Q99231 1755 aa9.5□□□□□ -0.89
YPT1YFL038C STH1P32597 1359 aa9.5□□□□□ -0.89
YPT1YFL038C IKI3Q06706 1349 aaKnown RBP9.49□□□□□ -0.89
YPT1YFL038C TY2B-BQ12491 1770 aa9.45□□□□□ -0.9
YPT1YFL038C SPP41P38904 1435 aa9.42□□□□□ -0.9
YPT1YFL038C RSE1Q04693 1361 aaKnown RBP9.41□□□□□ -0.9
YPT1YFL038C NUP170P38181 1502 aa9.39□□□□□ -0.91
YPT1YFL038C TY1B-HO13535 1793 aa9.37□□□□□ -0.91
YPT1YFL038C TY1B-DR5P0C2I2 1755 aa9.37□□□□□ -0.91
YPT1YFL038C TY1B-DR6P0C2I3 1755 aa9.37□□□□□ -0.91
YPT1YFL038C TY1B-LR2P0C2I5 1755 aa9.37□□□□□ -0.91
YPT1YFL038C TY1B-LR3P0C2I6 1755 aaKnown RBP9.37□□□□□ -0.91
YPT1YFL038C TY1B-PR1P0C2I9 1755 aaKnown RBP9.37□□□□□ -0.91
YPT1YFL038C TY1B-PR2P0C2J0 1756 aa9.37□□□□□ -0.91
YPT1YFL038C TY1B-PR3P0C2J1 1755 aaKnown RBP9.37□□□□□ -0.91
YPT1YFL038C TY1B-JR1P47098 1755 aa9.37□□□□□ -0.91
YPT1YFL038C TY1B-ML2Q03434 1755 aaKnown RBP9.37□□□□□ -0.91
YPT1YFL038C TY1B-ER1Q03612 1755 aa9.37□□□□□ -0.91
YPT1YFL038C TY1B-ML1Q04711 1755 aaKnown RBP9.37□□□□□ -0.91
YPT1YFL038C TY1B-GR2Q12269 1755 aa9.37□□□□□ -0.91
YPT1YFL038C TY1B-OLQ12273 1755 aa9.37□□□□□ -0.91
YPT1YFL038C TY1B-PLQ12414 1755 aaKnown RBP9.37□□□□□ -0.91
YPT1YFL038C PDR15Q04182 1529 aaKnown RBP9.37□□□□□ -0.91
YPT1YFL038C MLP2P40457 1679 aa9.37□□□□□ -0.91
YPT1YFL038C GEA1P47102 1408 aaPredicted RBP9.37□□□□□ -0.91
YPT1YFL038C TY1B-BRQ12193 1756 aa9.37□□□□□ -0.91
YPT1YFL038C TY1B-GR3Q12316 1755 aa9.37□□□□□ -0.91
YPT1YFL038C TY1B-ORQ92393 1755 aa9.37□□□□□ -0.91
YPT1YFL038C TSC11P40061 1430 aa9.36□□□□□ -0.91
YPT1YFL038C VTH1P40438 1549 aa9.33□□□□□ -0.92
YPT1YFL038C VTH2P40890 1549 aa9.33□□□□□ -0.92
YPT1YFL038C IFH1P39520 1085 aa9.33□□□□□ -0.92
YPT1YFL038C ULS1Q08562 1619 aa9.33□□□□□ -0.92
YPT1YFL038C CDC25P04821 1589 aa9.33□□□□□ -0.92
YPT1YFL038C SNT2P53127 1403 aa9.32□□□□□ -0.92
YPT1YFL038C PAN1P32521 1480 aa9.32□□□□□ -0.92
YPT1YFL038C SSM4P40318 1319 aa9.31□□□□□ -0.92
YPT1YFL038C RQC2Q12532 1038 aaKnown RBP9.31□□□□□ -0.92
YPT1YFL038C TY1B-JR2P47100 1755 aaKnown RBP9.24□□□□□ -0.93
YPT1YFL038C TY1B-ER2Q03619 1755 aa9.24□□□□□ -0.93
YPT1YFL038C TY1B-MR1Q04214 1755 aa9.24□□□□□ -0.93
YPT1YFL038C TY1B-MR2Q04670 1755 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms