RNA–Protein interactions for RNA: YOL143C

RIB4, Transcript of Lumazine synthase (DMRL synthase), yeast

Gene RIB4, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIB4	YOL143C	SIZ1	Q04195	904 aa		5.01	□□□□□ -1.61
RIB4	YOL143C	UBX5	Q06682	500 aa		5.01	□□□□□ -1.61
RIB4	YOL143C	KIN2	P13186	1147 aa	Known RBP	5	□□□□□ -1.61
RIB4	YOL143C	NPP1	P25353	742 aa		5	□□□□□ -1.61
RIB4	YOL143C	AAR2	P32357	355 aa	Predicted RBP	5	□□□□□ -1.61
RIB4	YOL143C	AFR1	P33304	620 aa		5	□□□□□ -1.61
RIB4	YOL143C	TAF5	P38129	798 aa		5	□□□□□ -1.61
RIB4	YOL143C	LAM1	P38851	1228 aa		5	□□□□□ -1.61
RIB4	YOL143C	HUL5	P53119	910 aa		5	□□□□□ -1.61
RIB4	YOL143C	ENV11	P53246	860 aa		5	□□□□□ -1.61
RIB4	YOL143C	SFB2	P53953	876 aa		5	□□□□□ -1.61
RIB4	YOL143C	SRT1	Q03175	343 aa		5	□□□□□ -1.61
RIB4	YOL143C	MSC2	Q03455	724 aa		5	□□□□□ -1.61
RIB4	YOL143C	SGD1	Q06132	899 aa		5	□□□□□ -1.61
RIB4	YOL143C	TY1B-NL2	Q99337	1749 aa	Known RBP	5	□□□□□ -1.61
RIB4	YOL143C	PPH3	P32345	308 aa		4.99	□□□□□ -1.61
RIB4	YOL143C	YHR020W	P38708	688 aa	Known RBP	4.99	□□□□□ -1.61
RIB4	YOL143C	OCA5	P38738	679 aa		4.99	□□□□□ -1.61
RIB4	YOL143C	YAP1801	P38856	637 aa		4.99	□□□□□ -1.61
RIB4	YOL143C	NIT1	P40447	199 aa		4.99	□□□□□ -1.61
RIB4	YOL143C	UTP8	P53276	713 aa	Known RBP	4.99	□□□□□ -1.61
RIB4	YOL143C	SRP1	Q02821	542 aa	Known RBP	4.99	□□□□□ -1.61
RIB4	YOL143C	TAF8	Q03750	510 aa		4.99	□□□□□ -1.61
RIB4	YOL143C	EAF1	Q06337	982 aa		4.99	□□□□□ -1.61
RIB4	YOL143C	YLL058W	Q12198	575 aa		4.99	□□□□□ -1.61
RIB4	YOL143C	OSW2	Q12202	724 aa		4.99	□□□□□ -1.61
RIB4	YOL143C	YBR284W	P38150	797 aa		4.98	□□□□□ -1.61
RIB4	YOL143C	MEF2	P39677	819 aa		4.98	□□□□□ -1.61
RIB4	YOL143C	PRP43	P53131	767 aa	Known RBP	4.98	□□□□□ -1.61
RIB4	YOL143C	YDR132C	Q03900	495 aa		4.98	□□□□□ -1.61
RIB4	YOL143C	NSE3	Q05541	303 aa		4.98	□□□□□ -1.61
RIB4	YOL143C	BDF2	Q07442	638 aa		4.98	□□□□□ -1.61
RIB4	YOL143C	SPO75	Q07798	868 aa		4.98	□□□□□ -1.61
RIB4	YOL143C	YPL277C	Q08989	487 aa		4.98	□□□□□ -1.61
RIB4	YOL143C	YOL098C	Q12496	1037 aa		4.98	□□□□□ -1.61
RIB4	YOL143C	PRP9	P19736	530 aa	Known RBP	4.97	□□□□□ -1.61
RIB4	YOL143C	ARE1	P25628	610 aa		4.97	□□□□□ -1.61
RIB4	YOL143C	THI80	P35202	319 aa		4.97	□□□□□ -1.61
RIB4	YOL143C	YRO2	P38079	344 aa		4.97	□□□□□ -1.61
RIB4	YOL143C	TSL1	P38427	1098 aa	Known RBP	4.97	□□□□□ -1.61
RIB4	YOL143C	CCC2	P38995	1004 aa		4.97	□□□□□ -1.61
RIB4	YOL143C	YJL049W	P47048	450 aa		4.97	□□□□□ -1.61
RIB4	YOL143C	ERP6	P53198	216 aa		4.97	□□□□□ -1.61
RIB4	YOL143C	GTF1	P53260	183 aa	Predicted RBP	4.97	□□□□□ -1.61
RIB4	YOL143C	YGR125W	P53273	1036 aa		4.97	□□□□□ -1.61
RIB4	YOL143C	CIT1	P00890	479 aa		4.96	□□□□□ -1.62
RIB4	YOL143C	RPS13	P05756	151 aa	Known RBP	4.96	□□□□□ -1.62
RIB4	YOL143C	TOP3	P13099	656 aa		4.96	□□□□□ -1.62
RIB4	YOL143C	FUN30	P31380	1131 aa		4.96	□□□□□ -1.62
RIB4	YOL143C	ECM21	P38167	1117 aa	Known RBP	4.96	□□□□□ -1.62
RIB4	YOL143C	GYP7	P48365	746 aa		4.96	□□□□□ -1.62
RIB4	YOL143C	GCV2	P49095	1034 aa		4.96	□□□□□ -1.62
RIB4	YOL143C	GCN5	Q03330	439 aa		4.96	□□□□□ -1.62
RIB4	YOL143C	BUL2	Q03758	920 aa	Known RBP	4.96	□□□□□ -1.62
RIB4	YOL143C	DUS4	Q06063	367 aa		4.96	□□□□□ -1.62
RIB4	YOL143C	FLC1	Q08967	793 aa		4.96	□□□□□ -1.62
RIB4	YOL143C	CDC53	Q12018	815 aa	Known RBP	4.96	□□□□□ -1.62
RIB4	YOL143C	YPR071W	Q12346	211 aa		4.96	□□□□□ -1.62
RIB4	YOL143C	OSH2	Q12451	1283 aa		4.96	□□□□□ -1.62
RIB4	YOL143C	HBN1	Q96VH4	193 aa		4.96	□□□□□ -1.62
RIB4	YOL143C	USO1	P25386	1790 aa		4.96	□□□□□ -1.62
RIB4	YOL143C	PRP6	P19735	899 aa	Predicted RBP	4.95	□□□□□ -1.62
RIB4	YOL143C	HSP60	P19882	572 aa	Known RBP	4.95	□□□□□ -1.62
RIB4	YOL143C	SRP101	P32916	621 aa		4.95	□□□□□ -1.62
RIB4	YOL143C	RSP5	P39940	809 aa	Known RBP	4.95	□□□□□ -1.62
RIB4	YOL143C	SIT1	P39980	628 aa		4.95	□□□□□ -1.62
RIB4	YOL143C	YER158C	P40095	573 aa		4.95	□□□□□ -1.62
RIB4	YOL143C	IRC24	P40580	263 aa		4.95	□□□□□ -1.62
RIB4	YOL143C	RIM8	P53179	542 aa		4.95	□□□□□ -1.62
RIB4	YOL143C	YOR352W	Q08816	343 aa		4.95	□□□□□ -1.62
RIB4	YOL143C	NUP192	P47054	1683 aa		4.94	□□□□□ -1.62
RIB4	YOL143C	SOD2	P00447	233 aa		4.94	□□□□□ -1.62
RIB4	YOL143C	ADE8	P04161	214 aa		4.94	□□□□□ -1.62
RIB4	YOL143C	CDC6	P09119	513 aa		4.94	□□□□□ -1.62
RIB4	YOL143C	ENA1	P13587	1091 aa		4.94	□□□□□ -1.62
RIB4	YOL143C	MSD1	P15179	658 aa	Known RBP	4.94	□□□□□ -1.62
RIB4	YOL143C	SPE2	P21182	396 aa		4.94	□□□□□ -1.62
RIB4	YOL143C	TOD6	P34219	525 aa		4.94	□□□□□ -1.62
RIB4	YOL143C	UBP5	P39944	805 aa		4.94	□□□□□ -1.62
RIB4	YOL143C	ZRG8	P40021	1076 aa		4.94	□□□□□ -1.62
RIB4	YOL143C	MND2	P40577	368 aa		4.94	□□□□□ -1.62
RIB4	YOL143C	SPT20	P50875	604 aa		4.94	□□□□□ -1.62
RIB4	YOL143C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	RIP-Chip
RIB4	YOL143C	ENA2	Q01896	1091 aa		4.94	□□□□□ -1.62
RIB4	YOL143C	CDA1	Q06702	301 aa		4.94	□□□□□ -1.62
RIB4	YOL143C	ENA5	Q12691	1091 aa		4.94	□□□□□ -1.62
RIB4	YOL143C	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.94	□□□□□ -1.62
RIB4	YOL143C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
RIB4	YOL143C	BET3	P36149	193 aa		4.93	□□□□□ -1.62
RIB4	YOL143C	TOK1	P40310	691 aa		4.93	□□□□□ -1.62
RIB4	YOL143C	RTA1	P53047	317 aa		4.93	□□□□□ -1.62
RIB4	YOL143C	TPO1	Q07824	586 aa		4.93	□□□□□ -1.62
RIB4	YOL143C	GPB1	Q08886	897 aa		4.93	□□□□□ -1.62
RIB4	YOL143C	EMC1	P25574	760 aa		4.92	□□□□□ -1.62
RIB4	YOL143C	SRP40	P32583	406 aa	Predicted RBP	4.92	□□□□□ -1.62
RIB4	YOL143C	YKE2	P52553	114 aa		4.92	□□□□□ -1.62
RIB4	YOL143C	YGR012W	P53206	393 aa		4.92	□□□□□ -1.62
RIB4	YOL143C	TPO2	P53283	614 aa		4.92	□□□□□ -1.62
RIB4	YOL143C	YPR196W	Q06595	470 aa		4.92	□□□□□ -1.62
RIB4	YOL143C	PPM2	Q08282	695 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 46.7 ms