Protein–RNA interactions for Protein: Q06702

CDA1, Chitin deacetylase 1, yeastyeast

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDA1Q06702 NSR1YGR159C 1245 nt19.74■□□□□ 0.75
CDA1Q06702 YML009W-BYML009W-B 477 nt19.61■□□□□ 0.73
CDA1Q06702 NOP1YDL014W 984 nt18.85■□□□□ 0.61
CDA1Q06702 MDJ1YFL016C 1536 nt17.94■□□□□ 0.46
CDA1Q06702 YKL036CYKL036C 393 nt17.35■□□□□ 0.37
CDA1Q06702 YJL027CYJL027C 417 nt16.49■□□□□ 0.23
CDA1Q06702 SRX1YKL086W 384 nt16.49■□□□□ 0.23
CDA1Q06702 Q0297Q0297 156 nt16.39■□□□□ 0.21
CDA1Q06702 SCS3YGL126W 1143 nt15.93■□□□□ 0.14
CDA1Q06702 DBP2YNL112W 1641 nt15.7■□□□□ 0.1
CDA1Q06702 YCR051WYCR051W 669 nt15.67■□□□□ 0.1
CDA1Q06702 YBR190WYBR190W 312 nt15.33■□□□□ 0.04
CDA1Q06702 TRN1tP(UGG)A 72 nt15.13■□□□□ 0.01
CDA1Q06702 SUF9tP(UGG)F 72 nt15.13■□□□□ 0.01
CDA1Q06702 SUF8tP(UGG)H 72 nt15.13■□□□□ 0.01
CDA1Q06702 tP(UGG)LtP(UGG)L 72 nt15.13■□□□□ 0.01
CDA1Q06702 SUF7tP(UGG)M 72 nt15.13■□□□□ 0.01
CDA1Q06702 tP(UGG)N1tP(UGG)N1 72 nt15.13■□□□□ 0.01
CDA1Q06702 tP(UGG)N2tP(UGG)N2 72 nt15.13■□□□□ 0.01
CDA1Q06702 tP(UGG)O1tP(UGG)O1 72 nt15.13■□□□□ 0.01
CDA1Q06702 SUF11tP(UGG)O2 72 nt15.13■□□□□ 0.01
CDA1Q06702 CCC1YLR220W 969 nt15.04■□□□□ -0
CDA1Q06702 RTC3YHR087W 336 nt15.01□□□□□ -0.01
CDA1Q06702 YOL085CYOL085C 342 nt14.94□□□□□ -0.02
CDA1Q06702 SCJ1YMR214W 1134 nt14.75□□□□□ -0.05
CDA1Q06702 RPP1BYDL130W 321 nt14.73□□□□□ -0.05
CDA1Q06702 PKP1YIL042C 1185 nt14.71□□□□□ -0.05
CDA1Q06702 SSA3YBL075C 1950 nt14.66□□□□□ -0.06
CDA1Q06702 RVS167YDR388W 1449 nt14.63□□□□□ -0.07
CDA1Q06702 ATS1YAL020C 1002 nt14.37□□□□□ -0.11
CDA1Q06702 tP(UGG)O3tP(UGG)O3 72 nt14.21□□□□□ -0.13
CDA1Q06702 PUT4YOR348C 1884 nt14.21□□□□□ -0.14
CDA1Q06702 PET122YER153C 765 nt14.16□□□□□ -0.14
CDA1Q06702 SHR5YOL110W 714 nt14.05□□□□□ -0.16
CDA1Q06702 URN1YPR152C 1398 nt13.92□□□□□ -0.18
CDA1Q06702 SCR1SCR1 522 nt13.9□□□□□ -0.18
CDA1Q06702 DEP1YAL013W 1218 nt13.86□□□□□ -0.19
CDA1Q06702 ARE1YCR048W 1833 nt13.85□□□□□ -0.19
CDA1Q06702 SAH1YER043C 1350 nt13.81□□□□□ -0.2
CDA1Q06702 POA1YBR022W 534 nt13.77□□□□□ -0.21
CDA1Q06702 OPI9YLR338W 858 nt13.76□□□□□ -0.21
CDA1Q06702 YDJ1YNL064C 1230 nt13.72□□□□□ -0.21
CDA1Q06702 YHR049C-AYHR049C-A 297 nt13.7□□□□□ -0.22
CDA1Q06702 RRN5YLR141W 1092 nt13.7□□□□□ -0.22
CDA1Q06702 RPN10YHR200W 807 nt13.58□□□□□ -0.24
CDA1Q06702 BSC6YOL137W 1494 nt13.53□□□□□ -0.24
CDA1Q06702 GAR1YHR089C 618 nt13.52□□□□□ -0.25
CDA1Q06702 YNL208WYNL208W 600 nt13.52□□□□□ -0.25
CDA1Q06702 YER088W-BYER088W-B 147 nt13.42□□□□□ -0.26
CDA1Q06702 BUD23YCR047C 828 nt13.37□□□□□ -0.27
CDA1Q06702 PUN1YLR414C 792 nt13.35□□□□□ -0.27
CDA1Q06702 RSB1YOR049C 1065 nt13.33□□□□□ -0.28
CDA1Q06702 SPT5YML010W 3192 nt13.28□□□□□ -0.28
CDA1Q06702 PTC2YER089C 1395 nt13.28□□□□□ -0.28
CDA1Q06702 YJR018WYJR018W 363 nt13.25□□□□□ -0.29
CDA1Q06702 PST2YDR032C 597 nt13.22□□□□□ -0.29
CDA1Q06702 NAB2YGL122C 1578 nt13.12□□□□□ -0.31
CDA1Q06702 TIR1YER011W 765 nt13.07□□□□□ -0.32
CDA1Q06702 SSA4YER103W 1929 nt13.07□□□□□ -0.32
CDA1Q06702 YJR120WYJR120W 351 nt13□□□□□ -0.33
CDA1Q06702 SSA1YAL005C 1929 nt13□□□□□ -0.33
CDA1Q06702 YKL097CYKL097C 411 nt12.98□□□□□ -0.33
CDA1Q06702 FIS1YIL065C 468 nt12.93□□□□□ -0.34
CDA1Q06702 FPR4YLR449W 1179 nt12.9□□□□□ -0.34
CDA1Q06702 DAL1YIR027C 1383 nt12.89□□□□□ -0.35
CDA1Q06702 RPP2BYDR382W 333 nt12.85□□□□□ -0.35
CDA1Q06702 INM2YDR287W 879 nt12.79□□□□□ -0.36
CDA1Q06702 PHO4YFR034C 939 nt12.79□□□□□ -0.36
CDA1Q06702 SRB2YHR041C 633 nt12.76□□□□□ -0.37
CDA1Q06702 MEP2YNL142W 1500 nt12.71□□□□□ -0.38
CDA1Q06702 BDF1YLR399C 2061 nt12.66□□□□□ -0.38
CDA1Q06702 YPS1YLR120C 1710 nt12.65□□□□□ -0.38
CDA1Q06702 YBL100CYBL100C 315 nt12.64□□□□□ -0.39
CDA1Q06702 DCW1YKL046C 1350 nt12.56□□□□□ -0.4
CDA1Q06702 SHU1YHL006C 453 nt12.56□□□□□ -0.4
CDA1Q06702 YHR165W-AYHR165W-A 312 nt12.55□□□□□ -0.4
CDA1Q06702 BDH2YAL061W 1254 nt12.55□□□□□ -0.4
CDA1Q06702 YDR095CYDR095C 411 nt12.52□□□□□ -0.41
CDA1Q06702 Q0182Q0182 405 nt12.49□□□□□ -0.41
CDA1Q06702 FUN26YAL022C 1554 nt12.48□□□□□ -0.41
CDA1Q06702 TAT1YBR069C 1860 nt12.47□□□□□ -0.41
CDA1Q06702 WWM1YFL010C 636 nt12.46□□□□□ -0.41
CDA1Q06702 TRM9YML014W 840 nt12.38□□□□□ -0.43
CDA1Q06702 ALF1YNL148C 765 nt12.37□□□□□ -0.43
CDA1Q06702 EMI2YDR516C 1503 nt12.36□□□□□ -0.43
CDA1Q06702 PTP1YDL230W 1008 nt12.3□□□□□ -0.44
CDA1Q06702 RPP2AYOL039W 321 nt12.3□□□□□ -0.44
CDA1Q06702 LSM3YLR438C-A 270 nt12.29□□□□□ -0.44
CDA1Q06702 CAC2YML102W 1407 nt12.28□□□□□ -0.44
CDA1Q06702 YAL037C-BYAL037C-B 975 nt12.28□□□□□ -0.44
CDA1Q06702 MOT3YMR070W 1473 nt12.27□□□□□ -0.45
CDA1Q06702 YMR090WYMR090W 684 nt12.26□□□□□ -0.45
CDA1Q06702 YOR139CYOR139C 393 nt12.26□□□□□ -0.45
CDA1Q06702 CCT6YDR188W 1641 nt12.25□□□□□ -0.45
CDA1Q06702 YBR220CYBR220C 1683 nt12.22□□□□□ -0.45
CDA1Q06702 YDL221WYDL221W 552 nt12.22□□□□□ -0.45
CDA1Q06702 NPL3YDR432W 1245 nt12.22□□□□□ -0.45
CDA1Q06702 YFL021C-AYFL021C-A 855 nt12.21□□□□□ -0.45
CDA1Q06702 YGR021WYGR021W 873 nt12.2□□□□□ -0.46
CDA1Q06702 HOM6YJR139C 1080 nt12.18□□□□□ -0.46
Retrieved 100 of 7,029 protein–RNA pairs in 8.8 ms