Protein–RNA interactions for Protein: P00447

SOD2, Superoxide dismutase [Mn], mitochondrial, yeastyeast

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SOD2P00447 NSR1YGR159C 1245 nt17.91■□□□□ 0.46
SOD2P00447 YML009W-BYML009W-B 477 nt17.74■□□□□ 0.43
SOD2P00447 NOP1YDL014W 984 nt17.16■□□□□ 0.34
SOD2P00447 MDJ1YFL016C 1536 nt16.24■□□□□ 0.19
SOD2P00447 YKL036CYKL036C 393 nt15.62■□□□□ 0.09
SOD2P00447 SRX1YKL086W 384 nt14.98□□□□□ -0.01
SOD2P00447 Q0297Q0297 156 nt14.94□□□□□ -0.02
SOD2P00447 YJL027CYJL027C 417 nt14.94□□□□□ -0.02
SOD2P00447 DBP2YNL112W 1641 nt14.27□□□□□ -0.12
SOD2P00447 YCR051WYCR051W 669 nt14.2□□□□□ -0.14
SOD2P00447 SCS3YGL126W 1143 nt14.08□□□□□ -0.16
SOD2P00447 YBR190WYBR190W 312 nt13.96□□□□□ -0.17
SOD2P00447 TRN1tP(UGG)A 72 nt13.7□□□□□ -0.22
SOD2P00447 SUF9tP(UGG)F 72 nt13.7□□□□□ -0.22
SOD2P00447 SUF8tP(UGG)H 72 nt13.7□□□□□ -0.22
SOD2P00447 tP(UGG)LtP(UGG)L 72 nt13.7□□□□□ -0.22
SOD2P00447 SUF7tP(UGG)M 72 nt13.7□□□□□ -0.22
SOD2P00447 tP(UGG)N1tP(UGG)N1 72 nt13.7□□□□□ -0.22
SOD2P00447 tP(UGG)N2tP(UGG)N2 72 nt13.7□□□□□ -0.22
SOD2P00447 tP(UGG)O1tP(UGG)O1 72 nt13.7□□□□□ -0.22
SOD2P00447 SUF11tP(UGG)O2 72 nt13.7□□□□□ -0.22
SOD2P00447 RTC3YHR087W 336 nt13.58□□□□□ -0.24
SOD2P00447 CCC1YLR220W 969 nt13.54□□□□□ -0.24
SOD2P00447 YOL085CYOL085C 342 nt13.53□□□□□ -0.24
SOD2P00447 RPP1BYDL130W 321 nt13.4□□□□□ -0.26
SOD2P00447 PKP1YIL042C 1185 nt13.34□□□□□ -0.27
SOD2P00447 RVS167YDR388W 1449 nt13.26□□□□□ -0.29
SOD2P00447 SCJ1YMR214W 1134 nt13.16□□□□□ -0.3
SOD2P00447 SSA3YBL075C 1950 nt13.07□□□□□ -0.32
SOD2P00447 PUT4YOR348C 1884 nt13.01□□□□□ -0.33
SOD2P00447 tP(UGG)O3tP(UGG)O3 72 nt12.87□□□□□ -0.35
SOD2P00447 PET122YER153C 765 nt12.83□□□□□ -0.36
SOD2P00447 SHR5YOL110W 714 nt12.73□□□□□ -0.37
SOD2P00447 ARE1YCR048W 1833 nt12.65□□□□□ -0.38
SOD2P00447 SCR1SCR1 522 nt12.64□□□□□ -0.39
SOD2P00447 URN1YPR152C 1398 nt12.6□□□□□ -0.39
SOD2P00447 ATS1YAL020C 1002 nt12.53□□□□□ -0.4
SOD2P00447 SAH1YER043C 1350 nt12.53□□□□□ -0.4
SOD2P00447 OPI9YLR338W 858 nt12.52□□□□□ -0.41
SOD2P00447 POA1YBR022W 534 nt12.52□□□□□ -0.41
SOD2P00447 DEP1YAL013W 1218 nt12.47□□□□□ -0.41
SOD2P00447 YDJ1YNL064C 1230 nt12.46□□□□□ -0.41
SOD2P00447 YHR049C-AYHR049C-A 297 nt12.44□□□□□ -0.42
SOD2P00447 RRN5YLR141W 1092 nt12.44□□□□□ -0.42
SOD2P00447 BSC6YOL137W 1494 nt12.34□□□□□ -0.43
SOD2P00447 RPN10YHR200W 807 nt12.31□□□□□ -0.44
SOD2P00447 YNL208WYNL208W 600 nt12.26□□□□□ -0.45
SOD2P00447 Q0182Q0182 405 nt12.21□□□□□ -0.45
SOD2P00447 GAR1YHR089C 618 nt12.21□□□□□ -0.45
SOD2P00447 YER088W-BYER088W-B 147 nt12.19□□□□□ -0.46
SOD2P00447 SPT5YML010W 3192 nt12.16□□□□□ -0.46
SOD2P00447 PUN1YLR414C 792 nt12.13□□□□□ -0.47
SOD2P00447 RSB1YOR049C 1065 nt12.12□□□□□ -0.47
SOD2P00447 BUD23YCR047C 828 nt12.09□□□□□ -0.47
SOD2P00447 PTC2YER089C 1395 nt12.05□□□□□ -0.48
SOD2P00447 YJR018WYJR018W 363 nt12□□□□□ -0.49
SOD2P00447 NAB2YGL122C 1578 nt11.96□□□□□ -0.5
SOD2P00447 MOT3YMR070W 1473 nt11.86□□□□□ -0.51
SOD2P00447 SSA4YER103W 1929 nt11.82□□□□□ -0.52
SOD2P00447 TIR1YER011W 765 nt11.81□□□□□ -0.52
SOD2P00447 YJR120WYJR120W 351 nt11.79□□□□□ -0.52
SOD2P00447 FIS1YIL065C 468 nt11.77□□□□□ -0.53
SOD2P00447 SSA1YAL005C 1929 nt11.75□□□□□ -0.53
SOD2P00447 DAL1YIR027C 1383 nt11.73□□□□□ -0.53
SOD2P00447 PST2YDR032C 597 nt11.64□□□□□ -0.55
SOD2P00447 RPP2BYDR382W 333 nt11.63□□□□□ -0.55
SOD2P00447 FPR4YLR449W 1179 nt11.63□□□□□ -0.55
SOD2P00447 MEP2YNL142W 1500 nt11.63□□□□□ -0.55
SOD2P00447 INM2YDR287W 879 nt11.62□□□□□ -0.55
SOD2P00447 PHO4YFR034C 939 nt11.62□□□□□ -0.55
SOD2P00447 YPS1YLR120C 1710 nt11.55□□□□□ -0.56
SOD2P00447 SRB2YHR041C 633 nt11.5□□□□□ -0.57
SOD2P00447 BDF1YLR399C 2061 nt11.45□□□□□ -0.58
SOD2P00447 YBL100CYBL100C 315 nt11.45□□□□□ -0.58
SOD2P00447 DCW1YKL046C 1350 nt11.43□□□□□ -0.58
SOD2P00447 YDR095CYDR095C 411 nt11.41□□□□□ -0.58
SOD2P00447 YHR165W-AYHR165W-A 312 nt11.39□□□□□ -0.59
SOD2P00447 BDH2YAL061W 1254 nt11.37□□□□□ -0.59
SOD2P00447 FUN26YAL022C 1554 nt11.31□□□□□ -0.6
SOD2P00447 TAT1YBR069C 1860 nt11.28□□□□□ -0.6
SOD2P00447 EMI2YDR516C 1503 nt11.28□□□□□ -0.6
SOD2P00447 WWM1YFL010C 636 nt11.25□□□□□ -0.61
SOD2P00447 PTP1YDL230W 1008 nt11.22□□□□□ -0.61
SOD2P00447 SHU1YHL006C 453 nt11.22□□□□□ -0.61
SOD2P00447 YBR220CYBR220C 1683 nt11.21□□□□□ -0.61
SOD2P00447 TRM9YML014W 840 nt11.2□□□□□ -0.62
SOD2P00447 YMR090WYMR090W 684 nt11.19□□□□□ -0.62
SOD2P00447 ALF1YNL148C 765 nt11.18□□□□□ -0.62
SOD2P00447 RPP2AYOL039W 321 nt11.18□□□□□ -0.62
SOD2P00447 CAC2YML102W 1407 nt11.18□□□□□ -0.62
SOD2P00447 YDL221WYDL221W 552 nt11.16□□□□□ -0.62
SOD2P00447 LSM3YLR438C-A 270 nt11.16□□□□□ -0.62
SOD2P00447 CCT6YDR188W 1641 nt11.15□□□□□ -0.62
SOD2P00447 YGR021WYGR021W 873 nt11.13□□□□□ -0.63
SOD2P00447 YAL037C-BYAL037C-B 975 nt11.11□□□□□ -0.63
SOD2P00447 SDH1YKL148C 1923 nt11.11□□□□□ -0.63
SOD2P00447 SIS1YNL007C 1059 nt11.09□□□□□ -0.63
SOD2P00447 YFL021C-AYFL021C-A 855 nt11.08□□□□□ -0.64
SOD2P00447 HOM6YJR139C 1080 nt11.07□□□□□ -0.64
SOD2P00447 YKL097CYKL097C 411 nt11.07□□□□□ -0.64
Retrieved 100 of 7,029 protein–RNA pairs in 14.7 ms