RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	YNR073C	P0CX09	502 aa		7.54	□□□□□ -1.2
MSB3	YNL293W	PMA2	P19657	947 aa		7.54	□□□□□ -1.2
MSB3	YNL293W	VMA8	P32610	256 aa	Known RBP	7.54	□□□□□ -1.2
MSB3	YNL293W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	7.54	□□□□□ -1.2	not detected
MSB3	YNL293W	YER156C	P40093	338 aa	Known RBP	7.54	□□□□□ -1.2
MSB3	YNL293W	TMA22	P47089	198 aa	Predicted RBP	7.54	□□□□□ -1.2
MSB3	YNL293W	STR2	P47164	639 aa		7.54	□□□□□ -1.2
MSB3	YNL293W	MRM2	P53123	320 aa		7.54	□□□□□ -1.2
MSB3	YNL293W	TRM8	Q12009	286 aa		7.54	□□□□□ -1.2
MSB3	YNL293W	RRP36	Q12481	300 aa	Predicted RBP	7.54	□□□□□ -1.2
MSB3	YNL293W	DDP1	Q99321	188 aa	Known RBP	7.54	□□□□□ -1.2
MSB3	YNL293W	SIR4	P11978	1358 aa		7.54	□□□□□ -1.2
MSB3	YNL293W	SPS1	P08458	490 aa		7.54	□□□□□ -1.2
MSB3	YNL293W	CDC15	P27636	974 aa		7.54	□□□□□ -1.2
MSB3	YNL293W	MEI4	P29467	408 aa		7.54	□□□□□ -1.2
MSB3	YNL293W	CNS1	P33313	385 aa		7.54	□□□□□ -1.2
MSB3	YNL293W	VPS21	P36017	210 aa	Known RBP	7.54	□□□□□ -1.2
MSB3	YNL293W	RCN1	P36054	211 aa		7.54	□□□□□ -1.2
MSB3	YNL293W	STP2	P38704	541 aa		7.54	□□□□□ -1.2
MSB3	YNL293W	ZRG8	P40021	1076 aa		7.54	□□□□□ -1.2
MSB3	YNL293W	RTR1	P40084	226 aa	Predicted RBP	7.54	□□□□□ -1.2
MSB3	YNL293W	YJR054W	P47114	497 aa		7.54	□□□□□ -1.2
MSB3	YNL293W	ISM1	P48526	1002 aa		7.54	□□□□□ -1.2
MSB3	YNL293W	RNH1	Q04740	348 aa		7.54	□□□□□ -1.2
MSB3	YNL293W	YLR125W	Q12138	136 aa		7.54	□□□□□ -1.2
MSB3	YNL293W	BUG1	Q12191	341 aa		7.54	□□□□□ -1.2
MSB3	YNL293W	SIT4	P20604	311 aa		7.53	□□□□□ -1.2
MSB3	YNL293W	REB1	P21538	810 aa		7.53	□□□□□ -1.2
MSB3	YNL293W	RTG3	P38165	486 aa		7.53	□□□□□ -1.2
MSB3	YNL293W	RRM3	P38766	723 aa		7.53	□□□□□ -1.2
MSB3	YNL293W	YER186C	P40101	306 aa		7.53	□□□□□ -1.2
MSB3	YNL293W	FYV10	P40492	516 aa		7.53	□□□□□ -1.2
MSB3	YNL293W	NUP84	P52891	726 aa		7.53	□□□□□ -1.2
MSB3	YNL293W	ATG1	P53104	897 aa		7.53	□□□□□ -1.2
MSB3	YNL293W	SPC105	P53148	917 aa		7.53	□□□□□ -1.2
MSB3	YNL293W	SPO1	P53541	631 aa		7.53	□□□□□ -1.2
MSB3	YNL293W	CWC25	P53854	179 aa	Known RBP	7.53	□□□□□ -1.2
MSB3	YNL293W	SLU7	Q02775	382 aa	Known RBP	7.53	□□□□□ -1.2
MSB3	YNL293W	RVB1	Q03940	463 aa	Known RBP	7.53	□□□□□ -1.2
MSB3	YNL293W	DON1	Q05610	365 aa		7.53	□□□□□ -1.2
MSB3	YNL293W	YLR031W	Q07978	186 aa		7.53	□□□□□ -1.2
MSB3	YNL293W	YOL057W	Q08225	711 aa		7.53	□□□□□ -1.2
MSB3	YNL293W	GPN2	Q08726	347 aa	Predicted RBP	7.53	□□□□□ -1.2
MSB3	YNL293W	KIN2	P13186	1147 aa	Known RBP	7.52	□□□□□ -1.2
MSB3	YNL293W	MSS116	P15424	664 aa	Known RBP	7.52	□□□□□ -1.2
MSB3	YNL293W	PRP4	P20053	465 aa	Known RBP	7.52	□□□□□ -1.2
MSB3	YNL293W	HXT3	P32466	567 aa	Known RBP	7.52	□□□□□ -1.2
MSB3	YNL293W	SMC1	P32908	1225 aa		7.52	□□□□□ -1.2
MSB3	YNL293W	STO1	P34160	861 aa	Known RBP	7.52	□□□□□ -1.2
MSB3	YNL293W	SET3	P36124	751 aa		7.52	□□□□□ -1.2
MSB3	YNL293W	PCF11	P39081	626 aa	Predicted RBP	7.52	□□□□□ -1.2
MSB3	YNL293W	QDR2	P40474	542 aa		7.52	□□□□□ -1.2
MSB3	YNL293W	ZPR1	P53303	486 aa	Known RBP	7.52	□□□□□ -1.2
MSB3	YNL293W	BSC5	P53755	489 aa		7.52	□□□□□ -1.2
MSB3	YNL293W	TFC8	Q12308	588 aa		7.52	□□□□□ -1.2
MSB3	YNL293W	SEY1	Q99287	776 aa		7.52	□□□□□ -1.2
MSB3	YNL293W	KRE5	P22023	1365 aa		7.52	□□□□□ -1.21
MSB3	YNL293W	DCD1	P06773	312 aa		7.52	□□□□□ -1.21
MSB3	YNL293W	ISY1	P21374	235 aa	Predicted RBP	7.52	□□□□□ -1.21
MSB3	YNL293W	RRP43	P25359	394 aa	Predicted RBP	7.52	□□□□□ -1.21
MSB3	YNL293W	RPC53	P25441	422 aa		7.52	□□□□□ -1.21
MSB3	YNL293W	PYC2	P32327	1180 aa	Known RBP	7.52	□□□□□ -1.21
MSB3	YNL293W	YME1	P32795	747 aa		7.52	□□□□□ -1.21
MSB3	YNL293W	AFR1	P33304	620 aa		7.52	□□□□□ -1.21
MSB3	YNL293W	PRX1	P34227	261 aa	Known RBP	7.52	□□□□□ -1.21
MSB3	YNL293W	LSM12	P38828	187 aa	Known RBP	7.52	□□□□□ -1.21
MSB3	YNL293W	BUD16	P39988	312 aa		7.52	□□□□□ -1.21
MSB3	YNL293W	UBP6	P43593	499 aa	Known RBP	7.52	□□□□□ -1.21
MSB3	YNL293W	STB4	P50104	949 aa		7.52	□□□□□ -1.21
MSB3	YNL293W	MCM6	P53091	1017 aa	Known RBP	7.52	□□□□□ -1.21
MSB3	YNL293W	COG2	P53271	262 aa		7.52	□□□□□ -1.21
MSB3	YNL293W	ATP25	Q03153	612 aa		7.52	□□□□□ -1.21
MSB3	YNL293W	ARP6	Q12509	438 aa		7.52	□□□□□ -1.21
MSB3	YNL293W	TUS1	Q06412	1307 aa		7.51	□□□□□ -1.21
MSB3	YNL293W	RKR1	Q04781	1562 aa		7.51	□□□□□ -1.21
MSB3	YNL293W	GPA1	P08539	472 aa		7.51	□□□□□ -1.21
MSB3	YNL293W	RPL19A	P0CX82	189 aa	Known RBP	7.51	□□□□□ -1.21
MSB3	YNL293W	RPL19B	P0CX83	189 aa	Predicted RBP	7.51	□□□□□ -1.21
MSB3	YNL293W	RAD53	P22216	821 aa		7.51	□□□□□ -1.21
MSB3	YNL293W	MAK5	P38112	773 aa	Predicted RBP	7.51	□□□□□ -1.21
MSB3	YNL293W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	7.51	□□□□□ -1.21	not detected
MSB3	YNL293W	YHI9	P38765	294 aa		7.51	□□□□□ -1.21
MSB3	YNL293W	MNN11	P46985	422 aa	Known RBP	7.51	□□□□□ -1.21
MSB3	YNL293W	ATH1	P48016	1211 aa		7.51	□□□□□ -1.21
MSB3	YNL293W	BRO1	P48582	844 aa		7.51	□□□□□ -1.21
MSB3	YNL293W	RFX1	P48743	811 aa		7.51	□□□□□ -1.21
MSB3	YNL293W	ATP22	P50273	684 aa	Predicted RBP	7.51	□□□□□ -1.21
MSB3	YNL293W	PAN2	P53010	1115 aa	Predicted RBP	7.51	□□□□□ -1.21
MSB3	YNL293W	RPM2	Q02773	1202 aa		7.51	□□□□□ -1.21
MSB3	YNL293W	YDL124W	Q07551	312 aa	Known RBP	7.51	□□□□□ -1.21
MSB3	YNL293W	OSW1	Q08692	278 aa		7.51	□□□□□ -1.21
MSB3	YNL293W	ICL2	Q12031	575 aa		7.51	□□□□□ -1.21
MSB3	YNL293W	NUR1	Q12066	484 aa		7.51	□□□□□ -1.21
MSB3	YNL293W	NCR1	Q12200	1170 aa		7.51	□□□□□ -1.21
MSB3	YNL293W	TRP5	P00931	707 aa	Known RBP	7.5	□□□□□ -1.21
MSB3	YNL293W	CLB2	P24869	491 aa		7.5	□□□□□ -1.21
MSB3	YNL293W	YKR015C	P36111	568 aa		7.5	□□□□□ -1.21
MSB3	YNL293W	AIM9	P40053	627 aa	Known RBP	7.5	□□□□□ -1.21
MSB3	YNL293W	FAR7	P43592	221 aa		7.5	□□□□□ -1.21
MSB3	YNL293W	NOP9	P47077	666 aa	Known RBP	7.5	□□□□□ -1.21

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms