Protein–RNA interactions for Protein: P53303

ZPR1, Zinc finger protein ZPR1, yeastyeast

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ZPR1P53303 YML009W-BYML009W-B 477 nt22.85■■□□□ 1.25
ZPR1P53303 NSR1YGR159C 1245 nt22.53■■□□□ 1.2
ZPR1P53303 NOP1YDL014W 984 nt22.31■■□□□ 1.16
ZPR1P53303 YKL036CYKL036C 393 nt20.76■□□□□ 0.91
ZPR1P53303 MDJ1YFL016C 1536 nt19.8■□□□□ 0.76
ZPR1P53303 Q0297Q0297 156 nt19.57■□□□□ 0.72
ZPR1P53303 SRX1YKL086W 384 nt19.48■□□□□ 0.71
ZPR1P53303 YJL027CYJL027C 417 nt19.42■□□□□ 0.7
ZPR1P53303 SCS3YGL126W 1143 nt18.97■□□□□ 0.63
ZPR1P53303 YCR051WYCR051W 669 nt18.5■□□□□ 0.55
ZPR1P53303 YOL085CYOL085C 342 nt17.96■□□□□ 0.47
ZPR1P53303 PKP1YIL042C 1185 nt17.66■□□□□ 0.42
ZPR1P53303 DBP2YNL112W 1641 nt17.58■□□□□ 0.4
ZPR1P53303 RPP1BYDL130W 321 nt17.56■□□□□ 0.4
ZPR1P53303 TRN1tP(UGG)A 72 nt17.48■□□□□ 0.39
ZPR1P53303 SUF9tP(UGG)F 72 nt17.48■□□□□ 0.39
ZPR1P53303 SUF8tP(UGG)H 72 nt17.48■□□□□ 0.39
ZPR1P53303 tP(UGG)LtP(UGG)L 72 nt17.48■□□□□ 0.39
ZPR1P53303 SUF7tP(UGG)M 72 nt17.48■□□□□ 0.39
ZPR1P53303 tP(UGG)N1tP(UGG)N1 72 nt17.48■□□□□ 0.39
ZPR1P53303 tP(UGG)N2tP(UGG)N2 72 nt17.48■□□□□ 0.39
ZPR1P53303 tP(UGG)O1tP(UGG)O1 72 nt17.48■□□□□ 0.39
ZPR1P53303 SUF11tP(UGG)O2 72 nt17.48■□□□□ 0.39
ZPR1P53303 CCC1YLR220W 969 nt17.32■□□□□ 0.36
ZPR1P53303 SCJ1YMR214W 1134 nt17.08■□□□□ 0.32
ZPR1P53303 ATS1YAL020C 1002 nt17.02■□□□□ 0.32
ZPR1P53303 YBR190WYBR190W 312 nt16.85■□□□□ 0.29
ZPR1P53303 PET122YER153C 765 nt16.75■□□□□ 0.27
ZPR1P53303 SCR1SCR1 522 nt16.67■□□□□ 0.26
ZPR1P53303 RVS167YDR388W 1449 nt16.64■□□□□ 0.25
ZPR1P53303 tP(UGG)O3tP(UGG)O3 72 nt16.6■□□□□ 0.25
ZPR1P53303 RTC3YHR087W 336 nt16.5■□□□□ 0.23
ZPR1P53303 RRN5YLR141W 1092 nt16.29■□□□□ 0.2
ZPR1P53303 SHR5YOL110W 714 nt16.08■□□□□ 0.16
ZPR1P53303 YDJ1YNL064C 1230 nt16.07■□□□□ 0.16
ZPR1P53303 RSB1YOR049C 1065 nt16.03■□□□□ 0.16
ZPR1P53303 YER088W-BYER088W-B 147 nt15.96■□□□□ 0.15
ZPR1P53303 PST2YDR032C 597 nt15.73■□□□□ 0.11
ZPR1P53303 GAR1YHR089C 618 nt15.68■□□□□ 0.1
ZPR1P53303 DEP1YAL013W 1218 nt15.55■□□□□ 0.08
ZPR1P53303 SSA3YBL075C 1950 nt15.52■□□□□ 0.07
ZPR1P53303 URN1YPR152C 1398 nt15.5■□□□□ 0.07
ZPR1P53303 RPN10YHR200W 807 nt15.36■□□□□ 0.05
ZPR1P53303 YNL208WYNL208W 600 nt15.34■□□□□ 0.05
ZPR1P53303 YKL097CYKL097C 411 nt15.24■□□□□ 0.03
ZPR1P53303 OPI9YLR338W 858 nt15.24■□□□□ 0.03
ZPR1P53303 TIR1YER011W 765 nt15.15■□□□□ 0.02
ZPR1P53303 PUT4YOR348C 1884 nt15.1■□□□□ 0.01
ZPR1P53303 SAH1YER043C 1350 nt15.08■□□□□ 0
ZPR1P53303 SHU1YHL006C 453 nt15.04■□□□□ -0
ZPR1P53303 SSA1YAL005C 1929 nt14.9□□□□□ -0.02
ZPR1P53303 ARE1YCR048W 1833 nt14.89□□□□□ -0.03
ZPR1P53303 YJR018WYJR018W 363 nt14.82□□□□□ -0.04
ZPR1P53303 PUN1YLR414C 792 nt14.82□□□□□ -0.04
ZPR1P53303 YAL037C-BYAL037C-B 975 nt14.75□□□□□ -0.05
ZPR1P53303 YHR049C-AYHR049C-A 297 nt14.73□□□□□ -0.05
ZPR1P53303 POA1YBR022W 534 nt14.67□□□□□ -0.06
ZPR1P53303 SRB2YHR041C 633 nt14.65□□□□□ -0.06
ZPR1P53303 RPP2BYDR382W 333 nt14.59□□□□□ -0.07
ZPR1P53303 PTC2YER089C 1395 nt14.59□□□□□ -0.07
ZPR1P53303 YJR120WYJR120W 351 nt14.58□□□□□ -0.08
ZPR1P53303 YOR139CYOR139C 393 nt14.55□□□□□ -0.08
ZPR1P53303 WWM1YFL010C 636 nt14.51□□□□□ -0.09
ZPR1P53303 YGR021WYGR021W 873 nt14.51□□□□□ -0.09
ZPR1P53303 HOM6YJR139C 1080 nt14.44□□□□□ -0.1
ZPR1P53303 NPL3YDR432W 1245 nt14.43□□□□□ -0.1
ZPR1P53303 BUD23YCR047C 828 nt14.42□□□□□ -0.1
ZPR1P53303 MNP1YGL068W 585 nt14.39□□□□□ -0.11
ZPR1P53303 NAB2YGL122C 1578 nt14.37□□□□□ -0.11
ZPR1P53303 BDH2YAL061W 1254 nt14.32□□□□□ -0.12
ZPR1P53303 BSC6YOL137W 1494 nt14.31□□□□□ -0.12
ZPR1P53303 YFL021C-AYFL021C-A 855 nt14.29□□□□□ -0.12
ZPR1P53303 INM2YDR287W 879 nt14.27□□□□□ -0.13
ZPR1P53303 YOL037CYOL037C 354 nt14.26□□□□□ -0.13
ZPR1P53303 RKM5YLR137W 1104 nt14.23□□□□□ -0.13
ZPR1P53303 DAL1YIR027C 1383 nt14.22□□□□□ -0.13
ZPR1P53303 FPR4YLR449W 1179 nt14.21□□□□□ -0.13
ZPR1P53303 SPT5YML010W 3192 nt14.19□□□□□ -0.14
ZPR1P53303 LSM3YLR438C-A 270 nt14.17□□□□□ -0.14
ZPR1P53303 FIS1YIL065C 468 nt14.16□□□□□ -0.14
ZPR1P53303 YBL100CYBL100C 315 nt14.16□□□□□ -0.14
ZPR1P53303 PHO4YFR034C 939 nt14.08□□□□□ -0.16
ZPR1P53303 TRM9YML014W 840 nt14.03□□□□□ -0.16
ZPR1P53303 FUN26YAL022C 1554 nt13.99□□□□□ -0.17
ZPR1P53303 tM(CAU)CtM(CAU)C 72 nt13.98□□□□□ -0.17
ZPR1P53303 IMT4tM(CAU)E 72 nt13.98□□□□□ -0.17
ZPR1P53303 IMT3tM(CAU)J3 72 nt13.98□□□□□ -0.17
ZPR1P53303 IMT1tM(CAU)O1 72 nt13.98□□□□□ -0.17
ZPR1P53303 IMT2tM(CAU)P 72 nt13.98□□□□□ -0.17
ZPR1P53303 SSA4YER103W 1929 nt13.91□□□□□ -0.18
ZPR1P53303 YLR281CYLR281C 468 nt13.89□□□□□ -0.19
ZPR1P53303 CCT6YDR188W 1641 nt13.85□□□□□ -0.19
ZPR1P53303 PUS2YGL063W 1113 nt13.84□□□□□ -0.19
ZPR1P53303 WHI5YOR083W 888 nt13.83□□□□□ -0.2
ZPR1P53303 ALF1YNL148C 765 nt13.78□□□□□ -0.2
ZPR1P53303 SUF2tP(AGG)C 72 nt13.74□□□□□ -0.21
ZPR1P53303 SUF10tP(AGG)N 72 nt13.74□□□□□ -0.21
ZPR1P53303 YPS1YLR120C 1710 nt13.72□□□□□ -0.21
ZPR1P53303 YDR095CYDR095C 411 nt13.68□□□□□ -0.22
ZPR1P53303 YLR154C-GYLR154C-G 150 nt13.67□□□□□ -0.22
Retrieved 100 of 7,029 protein–RNA pairs in 15.4 ms