Protein–RNA interactions for Protein: P38828

LSM12, Protein LSM12, yeastyeast

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM12P38828 NSR1YGR159C 1245 nt16.87■□□□□ 0.29
LSM12P38828 YML009W-BYML009W-B 477 nt16.62■□□□□ 0.25
LSM12P38828 NOP1YDL014W 984 nt16.13■□□□□ 0.17
LSM12P38828 MDJ1YFL016C 1536 nt15.43■□□□□ 0.06
LSM12P38828 SSA3YBL075C 1950 nt14.61□□□□□ -0.07
LSM12P38828 YKL036CYKL036C 393 nt14.53□□□□□ -0.08
LSM12P38828 YJL027CYJL027C 417 nt14.2□□□□□ -0.14
LSM12P38828 SRX1YKL086W 384 nt14.05□□□□□ -0.16
LSM12P38828 Q0297Q0297 156 nt13.98□□□□□ -0.17
LSM12P38828 DBP2YNL112W 1641 nt13.39□□□□□ -0.27
LSM12P38828 YBR190WYBR190W 312 nt13.36□□□□□ -0.27
LSM12P38828 YCR051WYCR051W 669 nt13.24□□□□□ -0.29
LSM12P38828 RTC3YHR087W 336 nt13.01□□□□□ -0.33
LSM12P38828 SCS3YGL126W 1143 nt13□□□□□ -0.33
LSM12P38828 TRN1tP(UGG)A 72 nt12.88□□□□□ -0.35
LSM12P38828 SUF9tP(UGG)F 72 nt12.88□□□□□ -0.35
LSM12P38828 SUF8tP(UGG)H 72 nt12.88□□□□□ -0.35
LSM12P38828 tP(UGG)LtP(UGG)L 72 nt12.88□□□□□ -0.35
LSM12P38828 SUF7tP(UGG)M 72 nt12.88□□□□□ -0.35
LSM12P38828 tP(UGG)N1tP(UGG)N1 72 nt12.88□□□□□ -0.35
LSM12P38828 tP(UGG)N2tP(UGG)N2 72 nt12.88□□□□□ -0.35
LSM12P38828 tP(UGG)O1tP(UGG)O1 72 nt12.88□□□□□ -0.35
LSM12P38828 SUF11tP(UGG)O2 72 nt12.88□□□□□ -0.35
LSM12P38828 CCC1YLR220W 969 nt12.65□□□□□ -0.38
LSM12P38828 PUT4YOR348C 1884 nt12.64□□□□□ -0.39
LSM12P38828 RVS167YDR388W 1449 nt12.55□□□□□ -0.4
LSM12P38828 YOL085CYOL085C 342 nt12.55□□□□□ -0.4
LSM12P38828 RPP1BYDL130W 321 nt12.53□□□□□ -0.4
LSM12P38828 SSA4YER103W 1929 nt12.5□□□□□ -0.41
LSM12P38828 SPT5YML010W 3192 nt12.4□□□□□ -0.42
LSM12P38828 PAC11YDR488C 1602 nt12.33□□□□□ -0.44
LSM12P38828 PKP1YIL042C 1185 nt12.31□□□□□ -0.44
LSM12P38828 SCJ1YMR214W 1134 nt12.28□□□□□ -0.44
LSM12P38828 ARE1YCR048W 1833 nt12.21□□□□□ -0.46
LSM12P38828 BDF1YLR399C 2061 nt12.18□□□□□ -0.46
LSM12P38828 NVJ2YPR091C 2313 nt12.17□□□□□ -0.46
LSM12P38828 POA1YBR022W 534 nt12.15□□□□□ -0.46
LSM12P38828 tP(UGG)O3tP(UGG)O3 72 nt12.06□□□□□ -0.48
LSM12P38828 YHR049C-AYHR049C-A 297 nt12.05□□□□□ -0.48
LSM12P38828 BSC6YOL137W 1494 nt12.04□□□□□ -0.48
LSM12P38828 SHR5YOL110W 714 nt12.01□□□□□ -0.49
LSM12P38828 SAH1YER043C 1350 nt11.99□□□□□ -0.49
LSM12P38828 TAT1YBR069C 1860 nt11.98□□□□□ -0.49
LSM12P38828 URN1YPR152C 1398 nt11.94□□□□□ -0.5
LSM12P38828 PET122YER153C 765 nt11.94□□□□□ -0.5
LSM12P38828 OPI9YLR338W 858 nt11.92□□□□□ -0.5
LSM12P38828 SCR1SCR1 522 nt11.83□□□□□ -0.52
LSM12P38828 FPS1YLL043W 2010 nt11.78□□□□□ -0.52
LSM12P38828 YDJ1YNL064C 1230 nt11.73□□□□□ -0.53
LSM12P38828 DEP1YAL013W 1218 nt11.71□□□□□ -0.53
LSM12P38828 BUD23YCR047C 828 nt11.7□□□□□ -0.54
LSM12P38828 RPN10YHR200W 807 nt11.68□□□□□ -0.54
LSM12P38828 PUN1YLR414C 792 nt11.57□□□□□ -0.56
LSM12P38828 RRN5YLR141W 1092 nt11.56□□□□□ -0.56
LSM12P38828 YNL208WYNL208W 600 nt11.56□□□□□ -0.56
LSM12P38828 ATS1YAL020C 1002 nt11.55□□□□□ -0.56
LSM12P38828 PTC2YER089C 1395 nt11.52□□□□□ -0.57
LSM12P38828 NAB2YGL122C 1578 nt11.49□□□□□ -0.57
LSM12P38828 MEP2YNL142W 1500 nt11.42□□□□□ -0.58
LSM12P38828 GAR1YHR089C 618 nt11.41□□□□□ -0.58
LSM12P38828 YER088W-BYER088W-B 147 nt11.35□□□□□ -0.59
LSM12P38828 YJR018WYJR018W 363 nt11.35□□□□□ -0.59
LSM12P38828 UME6YDR207C 2511 nt11.26□□□□□ -0.61
LSM12P38828 FIS1YIL065C 468 nt11.26□□□□□ -0.61
LSM12P38828 RSB1YOR049C 1065 nt11.25□□□□□ -0.61
LSM12P38828 YBR220CYBR220C 1683 nt11.23□□□□□ -0.61
LSM12P38828 SSA1YAL005C 1929 nt11.21□□□□□ -0.61
LSM12P38828 DAL1YIR027C 1383 nt11.21□□□□□ -0.61
LSM12P38828 DCW1YKL046C 1350 nt11.21□□□□□ -0.61
LSM12P38828 PCH2YBR186W 1695 nt11.14□□□□□ -0.63
LSM12P38828 GUT2YIL155C 1950 nt11.13□□□□□ -0.63
LSM12P38828 YPS1YLR120C 1710 nt11.12□□□□□ -0.63
LSM12P38828 FPR4YLR449W 1179 nt11.12□□□□□ -0.63
LSM12P38828 PHO4YFR034C 939 nt11.1□□□□□ -0.63
LSM12P38828 TIR1YER011W 765 nt11.09□□□□□ -0.63
LSM12P38828 INM2YDR287W 879 nt11.04□□□□□ -0.64
LSM12P38828 YHR165W-AYHR165W-A 312 nt11.03□□□□□ -0.64
LSM12P38828 YJR120WYJR120W 351 nt11.03□□□□□ -0.64
LSM12P38828 RPP2BYDR382W 333 nt11.02□□□□□ -0.65
LSM12P38828 YMR090WYMR090W 684 nt11.02□□□□□ -0.65
LSM12P38828 EMI2YDR516C 1503 nt11.01□□□□□ -0.65
LSM12P38828 SEC11YIR022W 504 nt10.99□□□□□ -0.65
LSM12P38828 YDR095CYDR095C 411 nt10.95□□□□□ -0.66
LSM12P38828 PIB2YGL023C 1908 nt10.94□□□□□ -0.66
LSM12P38828 SDH1YKL148C 1923 nt10.94□□□□□ -0.66
LSM12P38828 BOR1YNL275W 1731 nt10.89□□□□□ -0.67
LSM12P38828 YDL221WYDL221W 552 nt10.89□□□□□ -0.67
LSM12P38828 YBL100CYBL100C 315 nt10.83□□□□□ -0.68
LSM12P38828 CAC2YML102W 1407 nt10.76□□□□□ -0.69
LSM12P38828 MCH5YOR306C 1566 nt10.76□□□□□ -0.69
LSM12P38828 PTP1YDL230W 1008 nt10.75□□□□□ -0.69
LSM12P38828 PST2YDR032C 597 nt10.75□□□□□ -0.69
LSM12P38828 RPP2AYOL039W 321 nt10.73□□□□□ -0.69
LSM12P38828 RTF1YGL244W 1677 nt10.73□□□□□ -0.69
LSM12P38828 BDH2YAL061W 1254 nt10.72□□□□□ -0.69
LSM12P38828 YJL225CYJL225C 5277 nt10.72□□□□□ -0.69
LSM12P38828 SCC4YER147C 1875 nt10.72□□□□□ -0.69
LSM12P38828 FUN26YAL022C 1554 nt10.67□□□□□ -0.7
LSM12P38828 ALF1YNL148C 765 nt10.66□□□□□ -0.7
LSM12P38828 SRB2YHR041C 633 nt10.63□□□□□ -0.71
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms