RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C STE13P33894 931 aa4.63□□□□□ -1.67
CMS1YLR003C YIL166CP40445 542 aa4.63□□□□□ -1.67
CMS1YLR003C GLO1P50107 326 aa4.63□□□□□ -1.67
CMS1YLR003C ARO10Q06408 635 aa4.63□□□□□ -1.67
CMS1YLR003C SWM1Q12379 170 aa4.63□□□□□ -1.67
CMS1YLR003C MET6P05694 767 aaKnown RBP4.62□□□□□ -1.67
CMS1YLR003C CDC48P25694 835 aaKnown RBP4.62□□□□□ -1.67
CMS1YLR003C PET112P33893 541 aa4.62□□□□□ -1.67
CMS1YLR003C TSL1P38427 1098 aaKnown RBP4.62□□□□□ -1.67
CMS1YLR003C PCL5P38794 229 aa4.62□□□□□ -1.67
CMS1YLR003C VPS30Q02948 557 aa4.62□□□□□ -1.67
CMS1YLR003C THI7Q05998 598 aa4.62□□□□□ -1.67
CMS1YLR003C DUS3Q06053 668 aaKnown RBP4.62□□□□□ -1.67
CMS1YLR003C TUB3P09734 445 aaKnown RBP4.61□□□□□ -1.67
CMS1YLR003C KIN3P22209 435 aa4.61□□□□□ -1.67
CMS1YLR003C MUP1P50276 574 aa4.61□□□□□ -1.67
CMS1YLR003C ESC2Q06340 456 aa4.61□□□□□ -1.67
CMS1YLR003C YBR238CP38330 731 aaKnown RBP4.6□□□□□ -1.67
CMS1YLR003C YKE2P52553 114 aa4.6□□□□□ -1.67
CMS1YLR003C CRR1Q05790 422 aa4.6□□□□□ -1.67
CMS1YLR003C RPP1P38786 293 aa4.59□□□□□ -1.67
CMS1YLR003C CTF8P38877 133 aa4.59□□□□□ -1.67
CMS1YLR003C FKH2P41813 862 aa4.59□□□□□ -1.67
CMS1YLR003C ADY2P25613 283 aa4.58□□□□□ -1.68
CMS1YLR003C ABD1P32783 436 aaPredicted RBP4.58□□□□□ -1.68
CMS1YLR003C YIL108WP40483 696 aaKnown RBP4.58□□□□□ -1.68
CMS1YLR003C YJL163CP46996 555 aa4.58□□□□□ -1.68
CMS1YLR003C RIA1P53893 1110 aa4.58□□□□□ -1.68
CMS1YLR003C MBP1P39678 833 aa4.57□□□□□ -1.68
CMS1YLR003C YGR053CP53234 283 aa4.57□□□□□ -1.68
CMS1YLR003C RRP15Q06511 250 aaPredicted RBP4.57□□□□□ -1.68
CMS1YLR003C RPD3P32561 433 aa4.56□□□□□ -1.68
CMS1YLR003C YBR053CP38235 358 aa4.56□□□□□ -1.68
CMS1YLR003C KRI1P42846 591 aaKnown RBP4.56□□□□□ -1.68
CMS1YLR003C MNR2P35724 969 aa4.55□□□□□ -1.68
CMS1YLR003C GUS1P46655 708 aaKnown RBP RIP-Chip data4.55□□□□□ -1.68not detected
CMS1YLR003C AMA1P50082 593 aa4.55□□□□□ -1.68
CMS1YLR003C MRPS35P53292 345 aa4.55□□□□□ -1.68
CMS1YLR003C NPP1P25353 742 aa4.54□□□□□ -1.68
CMS1YLR003C DMC1P25453 334 aa4.54□□□□□ -1.68
CMS1YLR003C SBA1P28707 216 aaKnown RBP4.53□□□□□ -1.68
CMS1YLR003C TYE7P33122 291 aaPredicted RBP4.53□□□□□ -1.68
CMS1YLR003C YML020WQ03722 664 aa4.53□□□□□ -1.68
CMS1YLR003C PPH3P32345 308 aa4.52□□□□□ -1.69
CMS1YLR003C APM1Q00776 475 aaPredicted RBP4.52□□□□□ -1.69
CMS1YLR003C PRP4P20053 465 aaKnown RBP4.51□□□□□ -1.69
CMS1YLR003C RFA1P22336 621 aaKnown RBP4.51□□□□□ -1.69
CMS1YLR003C YHR078WP38799 552 aa4.51□□□□□ -1.69
CMS1YLR003C DAM1P53267 343 aa4.51□□□□□ -1.69
CMS1YLR003C YKR011CQ02209 353 aa4.51□□□□□ -1.69
CMS1YLR003C YDR306CQ06640 478 aa4.51□□□□□ -1.69
CMS1YLR003C SGO1Q08490 590 aa4.51□□□□□ -1.69
CMS1YLR003C ADE8P04161 214 aa4.5□□□□□ -1.69
CMS1YLR003C AGP1P25376 633 aa4.5□□□□□ -1.69
CMS1YLR003C VHR1P40522 640 aa4.5□□□□□ -1.69
CMS1YLR003C SSL2Q00578 843 aa4.5□□□□□ -1.69
CMS1YLR003C SPO11P23179 398 aa4.49□□□□□ -1.69
CMS1YLR003C AFR1P33304 620 aa4.49□□□□□ -1.69
CMS1YLR003C CBR1P38626 284 aaKnown RBP4.49□□□□□ -1.69
CMS1YLR003C CEP3P40969 608 aa4.49□□□□□ -1.69
CMS1YLR003C MRI1Q06489 411 aaKnown RBP4.49□□□□□ -1.69
CMS1YLR003C IRC13Q08630 104 aa4.49□□□□□ -1.69
CMS1YLR003C YIR042CP40586 236 aa4.48□□□□□ -1.69
CMS1YLR003C FAA4P47912 694 aaKnown RBP4.48□□□□□ -1.69
CMS1YLR003C ASI2P53895 289 aa4.48□□□□□ -1.69
CMS1YLR003C HDA1P53973 706 aa4.48□□□□□ -1.69
CMS1YLR003C VPS16Q03308 798 aa4.48□□□□□ -1.69
CMS1YLR003C PKH1Q03407 766 aa4.48□□□□□ -1.69
CMS1YLR003C OYE2Q03558 400 aaKnown RBP4.48□□□□□ -1.69
CMS1YLR003C ORC2P32833 620 aa4.47□□□□□ -1.69
CMS1YLR003C YJL206CP39529 758 aa4.47□□□□□ -1.69
CMS1YLR003C SCS3P53012 380 aa4.47□□□□□ -1.69
CMS1YLR003C AAR2P32357 355 aaPredicted RBP4.46□□□□□ -1.7
CMS1YLR003C NGG1P32494 702 aa4.46□□□□□ -1.7
CMS1YLR003C YRO2P38079 344 aa4.46□□□□□ -1.7
CMS1YLR003C GGA2P38817 585 aaKnown RBP4.46□□□□□ -1.7
CMS1YLR003C HSV2P50079 448 aaPredicted RBP4.46□□□□□ -1.7
CMS1YLR003C PUS2P53167 370 aa4.46□□□□□ -1.7
CMS1YLR003C FMP52P40008 231 aa4.45□□□□□ -1.7
CMS1YLR003C GAT1P43574 510 aa4.45□□□□□ -1.7
CMS1YLR003C CCM1P48237 864 aaPredicted RBP4.45□□□□□ -1.7
CMS1YLR003C TEL2P53038 688 aa4.45□□□□□ -1.7
CMS1YLR003C SMX3P54999 86 aaPredicted RBP4.45□□□□□ -1.7
CMS1YLR003C GDE1Q02979 1223 aa4.45□□□□□ -1.7
CMS1YLR003C NOP8Q08287 484 aaPredicted RBP4.45□□□□□ -1.7
CMS1YLR003C FAL1Q12099 399 aaKnown RBP4.45□□□□□ -1.7
CMS1YLR003C TAF3Q12297 353 aa4.45□□□□□ -1.7
CMS1YLR003C LAT1P12695 482 aaKnown RBP4.44□□□□□ -1.7
CMS1YLR003C URA1P28272 314 aaPredicted RBP4.44□□□□□ -1.7
CMS1YLR003C HIS7P33734 552 aaKnown RBP4.44□□□□□ -1.7
CMS1YLR003C VBA5P36172 582 aa4.44□□□□□ -1.7
CMS1YLR003C SIT1P39980 628 aa4.44□□□□□ -1.7
CMS1YLR003C NRG1Q03125 231 aa4.44□□□□□ -1.7
CMS1YLR003C RPN13O13563 156 aa4.43□□□□□ -1.7
CMS1YLR003C MPH2P0CD99 609 aa4.43□□□□□ -1.7
CMS1YLR003C YEL020CP39994 560 aa4.43□□□□□ -1.7
CMS1YLR003C SHE9Q04172 456 aa4.43□□□□□ -1.7
CMS1YLR003C RPS9AO13516 197 aaKnown RBP4.42□□□□□ -1.7
CMS1YLR003C CLN2P20438 545 aa4.42□□□□□ -1.7
CMS1YLR003C YUR1P26725 428 aa4.42□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms