RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C MTC1P47018 478 aaKnown RBP17.21■□□□□ 0.35
CMS1YLR003C FAP1P53971 965 aa16.38■□□□□ 0.21
CMS1YLR003C PRY3P47033 881 aa15.42■□□□□ 0.06
CMS1YLR003C DRS1P32892 752 aaKnown RBP15.29■□□□□ 0.04
CMS1YLR003C AAD16Q02895 342 aa14.97□□□□□ -0.01
CMS1YLR003C PRI1P10363 409 aa14.95□□□□□ -0.02
CMS1YLR003C YCK3P39962 524 aa14.48□□□□□ -0.09
CMS1YLR003C ISW2Q08773 1120 aa14.46□□□□□ -0.09
CMS1YLR003C HAA1Q12753 694 aaKnown RBP14.45□□□□□ -0.1
CMS1YLR003C RPG1P38249 964 aaKnown RBP14.31□□□□□ -0.12
CMS1YLR003C TSR3Q12094 313 aaKnown RBP14.08□□□□□ -0.16
CMS1YLR003C DIP2Q12220 943 aaPredicted RBP13.69□□□□□ -0.22
CMS1YLR003C MRPL32P25348 183 aa13.57□□□□□ -0.24
CMS1YLR003C RSE1Q04693 1361 aaKnown RBP13.46□□□□□ -0.25
CMS1YLR003C YGL015CP33199 130 aa13.24□□□□□ -0.29
CMS1YLR003C REB1P21538 810 aa13.11□□□□□ -0.31
CMS1YLR003C RPL17AP05740 184 aaKnown RBP13.08□□□□□ -0.32
CMS1YLR003C RPL17BP46990 184 aaKnown RBP13.08□□□□□ -0.32
CMS1YLR003C AVT3P36062 692 aa12.96□□□□□ -0.33
CMS1YLR003C CDC27P38042 758 aa12.7□□□□□ -0.38
CMS1YLR003C YKR023WP36119 530 aaKnown RBP12.49□□□□□ -0.41
CMS1YLR003C UBP10P53874 792 aaPredicted RBP12.49□□□□□ -0.41
CMS1YLR003C BUD31P25337 157 aaPredicted RBP12.46□□□□□ -0.41
CMS1YLR003C SPT21P35209 758 aa12.44□□□□□ -0.42
CMS1YLR003C MAP2P38174 421 aaKnown RBP12.41□□□□□ -0.42
CMS1YLR003C BFR2Q06631 534 aaKnown RBP12.34□□□□□ -0.43
CMS1YLR003C TFC8Q12308 588 aa12.24□□□□□ -0.45
CMS1YLR003C HOP09932 586 aa12.23□□□□□ -0.45
CMS1YLR003C DCD1P06773 312 aa12.18□□□□□ -0.46
CMS1YLR003C SCY1P53009 804 aa12.03□□□□□ -0.48
CMS1YLR003C TIF4632P39936 914 aaKnown RBP12.01□□□□□ -0.49
CMS1YLR003C TGL3P40308 642 aa11.96□□□□□ -0.49
CMS1YLR003C SLX5P32828 619 aaKnown RBP11.94□□□□□ -0.5
CMS1YLR003C RIM101P33400 625 aa11.85□□□□□ -0.51
CMS1YLR003C UBP9P39967 754 aa11.84□□□□□ -0.51
CMS1YLR003C BCH2P36122 765 aa11.81□□□□□ -0.52
CMS1YLR003C SIS1P25294 352 aaKnown RBP11.8□□□□□ -0.52
CMS1YLR003C EPS1P40557 701 aa11.46□□□□□ -0.57
CMS1YLR003C BDF1P35817 686 aa11.43□□□□□ -0.58
CMS1YLR003C OXP1P28273 1286 aa11.41□□□□□ -0.58
CMS1YLR003C MST1P07236 462 aa11.35□□□□□ -0.59
CMS1YLR003C PTP3P40048 928 aa11.3□□□□□ -0.6
CMS1YLR003C YIL055CP40523 627 aaKnown RBP11.3□□□□□ -0.6
CMS1YLR003C YOR238WQ08634 303 aa11.28□□□□□ -0.6
CMS1YLR003C YBL029C-AQ3E756 94 aa11.27□□□□□ -0.61
CMS1YLR003C NSR1P27476 414 aaKnown RBP RIP-Chip data11.2□□□□□ -0.62not detected
CMS1YLR003C BBC1P47068 1157 aa11.16□□□□□ -0.62
CMS1YLR003C VNX1P42839 908 aa11.13□□□□□ -0.63
CMS1YLR003C RSM7P47150 247 aa11.11□□□□□ -0.63
CMS1YLR003C YAP5P40574 245 aa11.1□□□□□ -0.63
CMS1YLR003C AI2P03876 854 aa11.07□□□□□ -0.64
CMS1YLR003C SPP1Q03012 353 aa11.04□□□□□ -0.64
CMS1YLR003C WSC3Q12215 556 aa10.98□□□□□ -0.65
CMS1YLR003C YAH1Q12184 172 aaKnown RBP10.97□□□□□ -0.65
CMS1YLR003C TIF11P38912 153 aaKnown RBP10.89□□□□□ -0.67
CMS1YLR003C GTT3P39996 337 aa10.88□□□□□ -0.67
CMS1YLR003C AIR2Q12476 344 aaKnown RBP10.86□□□□□ -0.67
CMS1YLR003C YJL171CP46992 396 aa10.85□□□□□ -0.67
CMS1YLR003C FKH1P40466 484 aa10.83□□□□□ -0.68
CMS1YLR003C YLR271WQ06152 274 aa10.76□□□□□ -0.69
CMS1YLR003C LDB19Q12502 818 aa10.72□□□□□ -0.69
CMS1YLR003C ULI1P43604 169 aa10.71□□□□□ -0.69
CMS1YLR003C PSD2P53037 1138 aaKnown RBP10.7□□□□□ -0.7
CMS1YLR003C TFA1P36100 482 aa10.68□□□□□ -0.7
CMS1YLR003C PIB1Q06651 286 aa10.68□□□□□ -0.7
CMS1YLR003C IOC2Q12072 812 aa10.67□□□□□ -0.7
CMS1YLR003C BMT6Q12291 365 aa10.63□□□□□ -0.71
CMS1YLR003C MRM1P25270 412 aa10.62□□□□□ -0.71
CMS1YLR003C MSB4Q12317 492 aa10.6□□□□□ -0.71
CMS1YLR003C EAP1P36041 632 aaKnown RBP10.57□□□□□ -0.72
CMS1YLR003C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.49□□□□□ -0.73not detected
CMS1YLR003C YOL036WQ08206 761 aa10.48□□□□□ -0.73
CMS1YLR003C SET4P42948 560 aa10.47□□□□□ -0.73
CMS1YLR003C RTG1P32607 177 aa10.46□□□□□ -0.73
CMS1YLR003C TRP5P00931 707 aaKnown RBP10.45□□□□□ -0.74
CMS1YLR003C YMR1P47147 688 aaKnown RBP RIP-Chip data10.45□□□□□ -0.74not detected
CMS1YLR003C SSP1P38871 571 aa10.44□□□□□ -0.74
CMS1YLR003C NCR1Q12200 1170 aa10.43□□□□□ -0.74
CMS1YLR003C DBP1P24784 617 aaKnown RBP10.41□□□□□ -0.74
CMS1YLR003C VPS29P38759 282 aa10.39□□□□□ -0.75
CMS1YLR003C YNL035CP53962 389 aaKnown RBP10.38□□□□□ -0.75
CMS1YLR003C SEC61P32915 480 aa10.37□□□□□ -0.75
CMS1YLR003C RTG3P38165 486 aa10.37□□□□□ -0.75
CMS1YLR003C VMA1P17255 1071 aaKnown RBP10.35□□□□□ -0.75
CMS1YLR003C YFR006WP43590 535 aa10.35□□□□□ -0.75
CMS1YLR003C CST9Q06032 482 aa10.33□□□□□ -0.76
CMS1YLR003C SAM3Q08986 587 aa10.32□□□□□ -0.76
CMS1YLR003C STS1P38637 319 aa10.31□□□□□ -0.76
CMS1YLR003C MGA2P40578 1113 aa10.29□□□□□ -0.76
CMS1YLR003C TFG1P41895 735 aaPredicted RBP10.27□□□□□ -0.77
CMS1YLR003C ABP1P15891 592 aaKnown RBP10.19□□□□□ -0.78
CMS1YLR003C JIP4Q03361 876 aa10.19□□□□□ -0.78
CMS1YLR003C DAN4P47179 1161 aa10.18□□□□□ -0.78
CMS1YLR003C SAP30P38429 201 aa10.16□□□□□ -0.78
CMS1YLR003C GYP5Q12344 894 aa10.15□□□□□ -0.78
CMS1YLR003C RCR1P38212 213 aa10.14□□□□□ -0.79
CMS1YLR003C YDL129WQ07555 291 aa10.13□□□□□ -0.79
CMS1YLR003C HTA1P04911 132 aaKnown RBP10.11□□□□□ -0.79
CMS1YLR003C HTA2P04912 132 aa10.11□□□□□ -0.79
CMS1YLR003C BCK2P33306 851 aa10.1□□□□□ -0.79
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms