RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W MSH3P25336 1018 aa2.52□□□□□ -2.01
NUP170YBL079W APM3P38153 483 aa2.52□□□□□ -2.01
NUP170YBL079W MSR1P38714 643 aa2.52□□□□□ -2.01
NUP170YBL079W CHS6P40955 746 aa2.52□□□□□ -2.01
NUP170YBL079W YFL052WP43551 465 aa2.52□□□□□ -2.01
NUP170YBL079W YJR054WP47114 497 aa2.52□□□□□ -2.01
NUP170YBL079W FUS2Q05670 677 aa2.52□□□□□ -2.01
NUP170YBL079W MIC60P36112 540 aa2.52□□□□□ -2.01
NUP170YBL079W RFC1P38630 861 aaKnown RBP2.52□□□□□ -2.01
NUP170YBL079W PTC2P39966 464 aaKnown RBP2.52□□□□□ -2.01
NUP170YBL079W BUD6P41697 788 aa2.52□□□□□ -2.01
NUP170YBL079W ARP5P53946 755 aa2.52□□□□□ -2.01
NUP170YBL079W DOT1Q04089 582 aaKnown RBP2.52□□□□□ -2.01
NUP170YBL079W YLR297WQ05899 129 aa2.52□□□□□ -2.01
NUP170YBL079W ESC2Q06340 456 aa2.52□□□□□ -2.01
NUP170YBL079W PGI1P12709 554 aaKnown RBP2.52□□□□□ -2.01
NUP170YBL079W CHS3P29465 1165 aa2.52□□□□□ -2.01
NUP170YBL079W POL12P38121 705 aaPredicted RBP2.52□□□□□ -2.01
NUP170YBL079W SSP1P38871 571 aa2.52□□□□□ -2.01
NUP170YBL079W AFG3P39925 761 aa2.52□□□□□ -2.01
NUP170YBL079W CCM1P48237 864 aaPredicted RBP2.52□□□□□ -2.01
NUP170YBL079W JJJ1P53863 590 aa2.52□□□□□ -2.01
NUP170YBL079W TGL5Q12043 749 aa2.52□□□□□ -2.01
NUP170YBL079W PDH1Q12428 516 aaKnown RBP2.52□□□□□ -2.01
NUP170YBL079W SWC3P31376 625 aa2.52□□□□□ -2.01
NUP170YBL079W MNR2P35724 969 aa2.52□□□□□ -2.01
NUP170YBL079W DBP7P36120 742 aaKnown RBP2.52□□□□□ -2.01
NUP170YBL079W FUI1P38196 639 aa2.52□□□□□ -2.01
NUP170YBL079W PRM9P39551 298 aa2.52□□□□□ -2.01
NUP170YBL079W YGR250CP53316 781 aaKnown RBP2.52□□□□□ -2.01
NUP170YBL079W RCR2Q03446 210 aaKnown RBP2.52□□□□□ -2.01
NUP170YBL079W HPF1Q05164 967 aa2.52□□□□□ -2.01
NUP170YBL079W DON1Q05610 365 aa2.52□□□□□ -2.01
NUP170YBL079W RAM1P22007 431 aa2.51□□□□□ -2.01
NUP170YBL079W SGF29P25554 259 aa2.51□□□□□ -2.01
NUP170YBL079W SLD2P34252 453 aa2.51□□□□□ -2.01
NUP170YBL079W YKL050CP35736 922 aa2.51□□□□□ -2.01
NUP170YBL079W NOP4P37838 685 aaKnown RBP2.51□□□□□ -2.01
NUP170YBL079W GPD2P41911 440 aaKnown RBP2.51□□□□□ -2.01
NUP170YBL079W RSC1P53236 928 aa2.51□□□□□ -2.01
NUP170YBL079W HRQ1Q05549 1077 aa2.51□□□□□ -2.01
NUP170YBL079W TFC6Q06339 672 aa2.51□□□□□ -2.01
NUP170YBL079W EFG1Q3E705 233 aaKnown RBP2.51□□□□□ -2.01
NUP170YBL079W APE1P14904 514 aa2.51□□□□□ -2.01
NUP170YBL079W ADK2P26364 225 aa2.51□□□□□ -2.01
NUP170YBL079W COY1P34237 679 aa2.51□□□□□ -2.01
NUP170YBL079W LST4P34239 828 aa2.51□□□□□ -2.01
NUP170YBL079W SIP5P40210 489 aaKnown RBP2.51□□□□□ -2.01
NUP170YBL079W RAD26P40352 1085 aa2.51□□□□□ -2.01
NUP170YBL079W FLC3P53121 802 aa2.51□□□□□ -2.01
NUP170YBL079W RTS3P53289 263 aa2.51□□□□□ -2.01
NUP170YBL079W PLP2Q12017 286 aa2.51□□□□□ -2.01
NUP170YBL079W RPL40AP0CH08 128 aaKnown RBP2.51□□□□□ -2.01
NUP170YBL079W RPL40BP0CH09 128 aaKnown RBP2.51□□□□□ -2.01
NUP170YBL079W DSF2P38213 736 aa2.51□□□□□ -2.01
NUP170YBL079W STN1P38960 494 aa2.51□□□□□ -2.01
NUP170YBL079W ASG1P40467 964 aa2.51□□□□□ -2.01
NUP170YBL079W YFL034WP43564 1073 aa2.51□□□□□ -2.01
NUP170YBL079W MRX6P48564 524 aa2.51□□□□□ -2.01
NUP170YBL079W ALO1P54783 526 aaKnown RBP2.51□□□□□ -2.01
NUP170YBL079W ROD1Q02805 837 aa2.51□□□□□ -2.01
NUP170YBL079W YOR296WQ08748 1289 aa2.51□□□□□ -2.01
NUP170YBL079W GFA1P14742 717 aaKnown RBP2.5□□□□□ -2.01
NUP170YBL079W SSD1P24276 1250 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
NUP170YBL079W MCM3P24279 971 aaKnown RBP2.5□□□□□ -2.01
NUP170YBL079W YSC83P32792 385 aa2.5□□□□□ -2.01
NUP170YBL079W YBR238CP38330 731 aaKnown RBP2.5□□□□□ -2.01
NUP170YBL079W PCA1P38360 1216 aa2.5□□□□□ -2.01
NUP170YBL079W YHL050CP38721 697 aa2.5□□□□□ -2.01
NUP170YBL079W CCC2P38995 1004 aa2.5□□□□□ -2.01
NUP170YBL079W ATG32P40458 529 aa2.5□□□□□ -2.01
NUP170YBL079W POL32P47110 350 aa2.5□□□□□ -2.01
NUP170YBL079W YNL247WP53852 767 aaKnown RBP2.5□□□□□ -2.01
NUP170YBL079W BNI4P53858 892 aa2.5□□□□□ -2.01
NUP170YBL079W TMA64Q04600 565 aaKnown RBP2.5□□□□□ -2.01
NUP170YBL079W PEX19Q07418 342 aa2.5□□□□□ -2.01
NUP170YBL079W MCD1Q12158 566 aa2.5□□□□□ -2.01
NUP170YBL079W MED1Q12321 566 aa2.5□□□□□ -2.01
NUP170YBL079W YDL206WQ12424 762 aa2.5□□□□□ -2.01
NUP170YBL079W GLN3P18494 730 aa2.5□□□□□ -2.01
NUP170YBL079W COX11P19516 300 aaKnown RBP2.5□□□□□ -2.01
NUP170YBL079W GAA1P39012 614 aa2.5□□□□□ -2.01
NUP170YBL079W XDJ1P39102 459 aa2.5□□□□□ -2.01
NUP170YBL079W YMR147WP40218 223 aaKnown RBP2.5□□□□□ -2.01
NUP170YBL079W YGL138CP53122 345 aa2.5□□□□□ -2.01
NUP170YBL079W RTT102P53330 157 aa2.5□□□□□ -2.01
NUP170YBL079W PKH3Q03306 898 aaPredicted RBP2.5□□□□□ -2.01
NUP170YBL079W RIM20Q12033 661 aa2.5□□□□□ -2.01
NUP170YBL079W PKH2Q12236 1081 aaKnown RBP2.5□□□□□ -2.01
NUP170YBL079W FOB1O13329 566 aa2.5□□□□□ -2.01
NUP170YBL079W ILV1P00927 576 aaKnown RBP2.5□□□□□ -2.01
NUP170YBL079W ALG1P16661 449 aa2.5□□□□□ -2.01
NUP170YBL079W KTR2P33550 425 aa2.5□□□□□ -2.01
NUP170YBL079W PPX1P38698 397 aa2.5□□□□□ -2.01
NUP170YBL079W YHL041WP38730 149 aa2.5□□□□□ -2.01
NUP170YBL079W DAS1P47005 663 aa2.5□□□□□ -2.01
NUP170YBL079W NIS1P53939 407 aa2.5□□□□□ -2.01
NUP170YBL079W RPA49Q01080 415 aaPredicted RBP2.5□□□□□ -2.01
NUP170YBL079W SMD2Q06217 110 aaKnown RBP2.5□□□□□ -2.01
NUP170YBL079W LEA1Q08963 238 aaPredicted RBP2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 98.8 ms