RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeast

Gene SMD3, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMD3	YLR147C	EAF1	Q06337	982 aa		5.7	□□□□□ -1.5
SMD3	YLR147C	UBX5	Q06682	500 aa		5.7	□□□□□ -1.5
SMD3	YLR147C	ACK1	Q07622	623 aa	Predicted RBP	5.7	□□□□□ -1.5
SMD3	YLR147C	ADY3	Q07732	790 aa		5.7	□□□□□ -1.5
SMD3	YLR147C	ESC8	Q08119	714 aa		5.7	□□□□□ -1.5
SMD3	YLR147C	HMI1	Q12039	706 aa		5.7	□□□□□ -1.5
SMD3	YLR147C	SRP101	P32916	621 aa		5.69	□□□□□ -1.5
SMD3	YLR147C	ERT1	P38140	529 aa		5.69	□□□□□ -1.5
SMD3	YLR147C	YBR238C	P38330	731 aa	Known RBP	5.69	□□□□□ -1.5
SMD3	YLR147C	YHR020W	P38708	688 aa	Known RBP	5.69	□□□□□ -1.5
SMD3	YLR147C	YER158C	P40095	573 aa		5.69	□□□□□ -1.5
SMD3	YLR147C	TAF1	P46677	1066 aa		5.69	□□□□□ -1.5
SMD3	YLR147C	TIM54	P47045	478 aa		5.69	□□□□□ -1.5
SMD3	YLR147C	HUL5	P53119	910 aa		5.69	□□□□□ -1.5
SMD3	YLR147C	RXT3	Q07458	294 aa		5.69	□□□□□ -1.5
SMD3	YLR147C	HBN1	Q96VH4	193 aa		5.69	□□□□□ -1.5
SMD3	YLR147C	ENA1	P13587	1091 aa		5.68	□□□□□ -1.5
SMD3	YLR147C	EMC1	P25574	760 aa		5.68	□□□□□ -1.5
SMD3	YLR147C	RPC82	P32349	654 aa		5.68	□□□□□ -1.5
SMD3	YLR147C	IOC3	P43596	787 aa		5.68	□□□□□ -1.5
SMD3	YLR147C	ERP6	P53198	216 aa		5.68	□□□□□ -1.5
SMD3	YLR147C	YGR012W	P53206	393 aa		5.68	□□□□□ -1.5
SMD3	YLR147C	ENA2	Q01896	1091 aa		5.68	□□□□□ -1.5
SMD3	YLR147C	ENA5	Q12691	1091 aa		5.68	□□□□□ -1.5
SMD3	YLR147C	YLR358C	O13565	187 aa		5.67	□□□□□ -1.5
SMD3	YLR147C	CIT1	P00890	479 aa		5.67	□□□□□ -1.5
SMD3	YLR147C	HSF1	P10961	833 aa		5.67	□□□□□ -1.5
SMD3	YLR147C	ARE1	P25628	610 aa		5.67	□□□□□ -1.5
SMD3	YLR147C	YBR284W	P38150	797 aa		5.67	□□□□□ -1.5
SMD3	YLR147C	OCA5	P38738	679 aa		5.67	□□□□□ -1.5
SMD3	YLR147C	CCC2	P38995	1004 aa		5.67	□□□□□ -1.5
SMD3	YLR147C	TOK1	P40310	691 aa		5.67	□□□□□ -1.5
SMD3	YLR147C	MET12	P46151	657 aa		5.67	□□□□□ -1.5
SMD3	YLR147C	TPO2	P53283	614 aa		5.67	□□□□□ -1.5
SMD3	YLR147C	YAP6	Q03935	383 aa		5.67	□□□□□ -1.5
SMD3	YLR147C	NSE3	Q05541	303 aa		5.67	□□□□□ -1.5
SMD3	YLR147C	BDF2	Q07442	638 aa		5.67	□□□□□ -1.5
SMD3	YLR147C	YPR071W	Q12346	211 aa		5.67	□□□□□ -1.5
SMD3	YLR147C	OSH2	Q12451	1283 aa		5.67	□□□□□ -1.5
SMD3	YLR147C	HSP60	P19882	572 aa	Known RBP	5.66	□□□□□ -1.5
SMD3	YLR147C	CDC48	P25694	835 aa	Known RBP	5.66	□□□□□ -1.5
SMD3	YLR147C	POA1	P38218	177 aa		5.66	□□□□□ -1.5
SMD3	YLR147C	YGR125W	P53273	1036 aa		5.66	□□□□□ -1.5
SMD3	YLR147C	CLU1	Q03690	1277 aa	Known RBP	5.66	□□□□□ -1.5
SMD3	YLR147C	LCD1	Q04377	747 aa		5.66	□□□□□ -1.5
SMD3	YLR147C	FLC1	Q08967	793 aa		5.66	□□□□□ -1.5
SMD3	YLR147C	CHA4	P43634	648 aa		5.65	□□□□□ -1.5
SMD3	YLR147C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	5.65	□□□□□ -1.5	not detected
SMD3	YLR147C	YLR224W	Q05947	369 aa		5.65	□□□□□ -1.5
SMD3	YLR147C	YPR196W	Q06595	470 aa		5.65	□□□□□ -1.5
SMD3	YLR147C	YOL098C	Q12496	1037 aa		5.65	□□□□□ -1.5
SMD3	YLR147C	HIS5	P07172	385 aa		5.64	□□□□□ -1.51
SMD3	YLR147C	SPE1	P08432	466 aa		5.64	□□□□□ -1.51
SMD3	YLR147C	TOP3	P13099	656 aa		5.64	□□□□□ -1.51
SMD3	YLR147C	MSD1	P15179	658 aa	Known RBP	5.64	□□□□□ -1.51
SMD3	YLR147C	YCR015C	P25616	317 aa		5.64	□□□□□ -1.51
SMD3	YLR147C	CDC11	P32458	415 aa		5.64	□□□□□ -1.51
SMD3	YLR147C	LST4	P34239	828 aa		5.64	□□□□□ -1.51
SMD3	YLR147C	PET10	P36139	283 aa		5.64	□□□□□ -1.51
SMD3	YLR147C	RSP5	P39940	809 aa	Known RBP	5.64	□□□□□ -1.51
SMD3	YLR147C	TAF8	Q03750	510 aa		5.64	□□□□□ -1.51
SMD3	YLR147C	NOP12	Q08208	459 aa	Known RBP	5.64	□□□□□ -1.51
SMD3	YLR147C	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.63	□□□□□ -1.51	not detected
SMD3	YLR147C	GIP4	P39732	760 aa		5.63	□□□□□ -1.51
SMD3	YLR147C	CCM1	P48237	864 aa	Predicted RBP	5.63	□□□□□ -1.51
SMD3	YLR147C	NOT3	P06102	836 aa	Known RBP	5.62	□□□□□ -1.51
SMD3	YLR147C	REC104	P33323	182 aa		5.62	□□□□□ -1.51
SMD3	YLR147C	BET3	P36149	193 aa		5.62	□□□□□ -1.51
SMD3	YLR147C	PLB1	P39105	664 aa		5.62	□□□□□ -1.51
SMD3	YLR147C	RTA1	P53047	317 aa		5.62	□□□□□ -1.51
SMD3	YLR147C	RAI1	P53063	387 aa	Known RBP	5.62	□□□□□ -1.51
SMD3	YLR147C	TMA10	Q06177	86 aa		5.62	□□□□□ -1.51
SMD3	YLR147C	CDC53	Q12018	815 aa	Known RBP	5.62	□□□□□ -1.51
SMD3	YLR147C	CTS1	P29029	562 aa		5.61	□□□□□ -1.51
SMD3	YLR147C	URM1	P40554	99 aa	Predicted RBP	5.61	□□□□□ -1.51
SMD3	YLR147C	PSP2	P50109	593 aa	Known RBP	5.61	□□□□□ -1.51
SMD3	YLR147C	WHI4	Q07655	649 aa	Known RBP	5.61	□□□□□ -1.51
SMD3	YLR147C	CAN1	P04817	590 aa		5.6	□□□□□ -1.51
SMD3	YLR147C	STE13	P33894	931 aa		5.6	□□□□□ -1.51
SMD3	YLR147C	SHM2	P37291	469 aa	Known RBP	5.6	□□□□□ -1.51
SMD3	YLR147C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.6	□□□□□ -1.51	not detected
SMD3	YLR147C	HUL4	P40985	892 aa		5.6	□□□□□ -1.51
SMD3	YLR147C	UBP6	P43593	499 aa	Known RBP	5.6	□□□□□ -1.51
SMD3	YLR147C	PPM2	Q08282	695 aa		5.6	□□□□□ -1.51
SMD3	YLR147C	STE11	P23561	717 aa		5.59	□□□□□ -1.51
SMD3	YLR147C	SCT1	P32784	759 aa		5.59	□□□□□ -1.51
SMD3	YLR147C	HDA1	P53973	706 aa		5.59	□□□□□ -1.51
SMD3	YLR147C	YDL124W	Q07551	312 aa	Known RBP	5.59	□□□□□ -1.51
SMD3	YLR147C	RPP2A	P05319	106 aa	Known RBP	5.58	□□□□□ -1.52
SMD3	YLR147C	FBP1	P09201	348 aa		5.58	□□□□□ -1.52
SMD3	YLR147C	SRP40	P32583	406 aa	Predicted RBP	5.58	□□□□□ -1.52
SMD3	YLR147C	ATG19	P35193	415 aa		5.58	□□□□□ -1.52
SMD3	YLR147C	YKL222C	P35995	705 aa		5.58	□□□□□ -1.52
SMD3	YLR147C	GGA2	P38817	585 aa	Known RBP	5.58	□□□□□ -1.52
SMD3	YLR147C	MNN10	P50108	393 aa	Known RBP	5.58	□□□□□ -1.52
SMD3	YLR147C	NCS6	P53088	359 aa		5.58	□□□□□ -1.52
SMD3	YLR147C	MCM6	P53091	1017 aa	Known RBP	5.58	□□□□□ -1.52
SMD3	YLR147C	SSL1	Q04673	461 aa	Predicted RBP	5.58	□□□□□ -1.52
SMD3	YLR147C	ENV7	Q12003	364 aa		5.58	□□□□□ -1.52
SMD3	YLR147C	UPC2	Q12151	913 aa		5.58	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 37 ms