Protein–RNA interactions for Protein: Q05947

YLR224W, F-box protein YLR224W, yeastyeast

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YLR224WQ05947 NSR1YGR159C 1245 nt17.05■□□□□ 0.32
YLR224WQ05947 YML009W-BYML009W-B 477 nt16.52■□□□□ 0.24
YLR224WQ05947 NOP1YDL014W 984 nt15.86■□□□□ 0.13
YLR224WQ05947 MDJ1YFL016C 1536 nt15.83■□□□□ 0.12
YLR224WQ05947 YJL027CYJL027C 417 nt14.52□□□□□ -0.09
YLR224WQ05947 YKL036CYKL036C 393 nt14.28□□□□□ -0.12
YLR224WQ05947 SSA3YBL075C 1950 nt13.93□□□□□ -0.18
YLR224WQ05947 SRX1YKL086W 384 nt13.85□□□□□ -0.19
YLR224WQ05947 Q0297Q0297 156 nt13.75□□□□□ -0.21
YLR224WQ05947 DBP2YNL112W 1641 nt13.73□□□□□ -0.21
YLR224WQ05947 YBR190WYBR190W 312 nt13.68□□□□□ -0.22
YLR224WQ05947 RTC3YHR087W 336 nt13.32□□□□□ -0.28
YLR224WQ05947 YCR051WYCR051W 669 nt13.12□□□□□ -0.31
YLR224WQ05947 PUT4YOR348C 1884 nt12.99□□□□□ -0.33
YLR224WQ05947 TRN1tP(UGG)A 72 nt12.9□□□□□ -0.34
YLR224WQ05947 SUF9tP(UGG)F 72 nt12.9□□□□□ -0.34
YLR224WQ05947 SUF8tP(UGG)H 72 nt12.9□□□□□ -0.34
YLR224WQ05947 tP(UGG)LtP(UGG)L 72 nt12.9□□□□□ -0.34
YLR224WQ05947 SUF7tP(UGG)M 72 nt12.9□□□□□ -0.34
YLR224WQ05947 tP(UGG)N1tP(UGG)N1 72 nt12.9□□□□□ -0.34
YLR224WQ05947 tP(UGG)N2tP(UGG)N2 72 nt12.9□□□□□ -0.34
YLR224WQ05947 tP(UGG)O1tP(UGG)O1 72 nt12.9□□□□□ -0.34
YLR224WQ05947 SUF11tP(UGG)O2 72 nt12.9□□□□□ -0.34
YLR224WQ05947 SCS3YGL126W 1143 nt12.79□□□□□ -0.36
YLR224WQ05947 CCC1YLR220W 969 nt12.73□□□□□ -0.37
YLR224WQ05947 RVS167YDR388W 1449 nt12.7□□□□□ -0.38
YLR224WQ05947 ARE1YCR048W 1833 nt12.53□□□□□ -0.4
YLR224WQ05947 SCJ1YMR214W 1134 nt12.53□□□□□ -0.4
YLR224WQ05947 POA1YBR022W 534 nt12.52□□□□□ -0.41
YLR224WQ05947 YOL085CYOL085C 342 nt12.39□□□□□ -0.43
YLR224WQ05947 BSC6YOL137W 1494 nt12.39□□□□□ -0.43
YLR224WQ05947 SPT5YML010W 3192 nt12.38□□□□□ -0.43
YLR224WQ05947 YHR049C-AYHR049C-A 297 nt12.37□□□□□ -0.43
YLR224WQ05947 RPP1BYDL130W 321 nt12.34□□□□□ -0.43
YLR224WQ05947 SAH1YER043C 1350 nt12.3□□□□□ -0.44
YLR224WQ05947 SSA4YER103W 1929 nt12.29□□□□□ -0.44
YLR224WQ05947 PKP1YIL042C 1185 nt12.25□□□□□ -0.45
YLR224WQ05947 URN1YPR152C 1398 nt12.22□□□□□ -0.45
YLR224WQ05947 OPI9YLR338W 858 nt12.19□□□□□ -0.46
YLR224WQ05947 SHR5YOL110W 714 nt12.11□□□□□ -0.47
YLR224WQ05947 BUD23YCR047C 828 nt12.01□□□□□ -0.49
YLR224WQ05947 DEP1YAL013W 1218 nt12□□□□□ -0.49
YLR224WQ05947 tP(UGG)O3tP(UGG)O3 72 nt11.96□□□□□ -0.49
YLR224WQ05947 BDF1YLR399C 2061 nt11.9□□□□□ -0.5
YLR224WQ05947 RPN10YHR200W 807 nt11.85□□□□□ -0.51
YLR224WQ05947 PET122YER153C 765 nt11.83□□□□□ -0.52
YLR224WQ05947 PUN1YLR414C 792 nt11.82□□□□□ -0.52
YLR224WQ05947 PTC2YER089C 1395 nt11.8□□□□□ -0.52
YLR224WQ05947 NAB2YGL122C 1578 nt11.75□□□□□ -0.53
YLR224WQ05947 YNL208WYNL208W 600 nt11.74□□□□□ -0.53
YLR224WQ05947 TAT1YBR069C 1860 nt11.73□□□□□ -0.53
YLR224WQ05947 MEP2YNL142W 1500 nt11.71□□□□□ -0.53
YLR224WQ05947 YJR018WYJR018W 363 nt11.61□□□□□ -0.55
YLR224WQ05947 SCR1SCR1 522 nt11.61□□□□□ -0.55
YLR224WQ05947 YDJ1YNL064C 1230 nt11.58□□□□□ -0.56
YLR224WQ05947 Q0182Q0182 405 nt11.57□□□□□ -0.56
YLR224WQ05947 PAC11YDR488C 1602 nt11.56□□□□□ -0.56
YLR224WQ05947 FIS1YIL065C 468 nt11.54□□□□□ -0.56
YLR224WQ05947 DCW1YKL046C 1350 nt11.52□□□□□ -0.57
YLR224WQ05947 RRN5YLR141W 1092 nt11.47□□□□□ -0.57
YLR224WQ05947 DAL1YIR027C 1383 nt11.46□□□□□ -0.57
YLR224WQ05947 GAR1YHR089C 618 nt11.42□□□□□ -0.58
YLR224WQ05947 YPS1YLR120C 1710 nt11.4□□□□□ -0.58
YLR224WQ05947 MOT3YMR070W 1473 nt11.4□□□□□ -0.58
YLR224WQ05947 FPR4YLR449W 1179 nt11.4□□□□□ -0.58
YLR224WQ05947 YBR220CYBR220C 1683 nt11.38□□□□□ -0.59
YLR224WQ05947 PHO4YFR034C 939 nt11.36□□□□□ -0.59
YLR224WQ05947 ATS1YAL020C 1002 nt11.35□□□□□ -0.59
YLR224WQ05947 EMI2YDR516C 1503 nt11.34□□□□□ -0.59
YLR224WQ05947 YJR120WYJR120W 351 nt11.31□□□□□ -0.6
YLR224WQ05947 YHR165W-AYHR165W-A 312 nt11.3□□□□□ -0.6
YLR224WQ05947 YMR090WYMR090W 684 nt11.29□□□□□ -0.6
YLR224WQ05947 INM2YDR287W 879 nt11.28□□□□□ -0.6
YLR224WQ05947 YER088W-BYER088W-B 147 nt11.24□□□□□ -0.61
YLR224WQ05947 YDR095CYDR095C 411 nt11.22□□□□□ -0.61
YLR224WQ05947 NVJ2YPR091C 2313 nt11.22□□□□□ -0.61
YLR224WQ05947 SDH1YKL148C 1923 nt11.19□□□□□ -0.62
YLR224WQ05947 YDL221WYDL221W 552 nt11.18□□□□□ -0.62
YLR224WQ05947 RPP2BYDR382W 333 nt11.16□□□□□ -0.62
YLR224WQ05947 PCH2YBR186W 1695 nt11.14□□□□□ -0.63
YLR224WQ05947 GUT2YIL155C 1950 nt11.11□□□□□ -0.63
YLR224WQ05947 RSB1YOR049C 1065 nt11.11□□□□□ -0.63
YLR224WQ05947 SSA1YAL005C 1929 nt11.1□□□□□ -0.63
YLR224WQ05947 CAC2YML102W 1407 nt11.09□□□□□ -0.63
YLR224WQ05947 TIR1YER011W 765 nt11.07□□□□□ -0.64
YLR224WQ05947 SEC11YIR022W 504 nt11.07□□□□□ -0.64
YLR224WQ05947 YBL100CYBL100C 315 nt11.06□□□□□ -0.64
YLR224WQ05947 PTP1YDL230W 1008 nt11.05□□□□□ -0.64
YLR224WQ05947 SCC4YER147C 1875 nt11.01□□□□□ -0.65
YLR224WQ05947 RPP2AYOL039W 321 nt11□□□□□ -0.65
YLR224WQ05947 IRC15YPL017C 1500 nt10.94□□□□□ -0.66
YLR224WQ05947 PIB2YGL023C 1908 nt10.93□□□□□ -0.66
YLR224WQ05947 FUN26YAL022C 1554 nt10.91□□□□□ -0.66
YLR224WQ05947 ALF1YNL148C 765 nt10.88□□□□□ -0.67
YLR224WQ05947 GIS3YLR094C 1509 nt10.87□□□□□ -0.67
YLR224WQ05947 YSC84YHR016C 1407 nt10.84□□□□□ -0.67
YLR224WQ05947 BDH2YAL061W 1254 nt10.84□□□□□ -0.67
YLR224WQ05947 SRB2YHR041C 633 nt10.8□□□□□ -0.68
YLR224WQ05947 RTF1YGL244W 1677 nt10.79□□□□□ -0.68
YLR224WQ05947 YHL050CYHL050C 2094 nt10.77□□□□□ -0.69
Retrieved 100 of 7,029 protein–RNA pairs in 12 ms