Protein–RNA interactions for Protein: P08432

SPE1, Ornithine decarboxylase, yeastyeast

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPE1P08432 YML009W-BYML009W-B 477 nt21.51■■□□□ 1.03
SPE1P08432 NOP1YDL014W 984 nt21.07■□□□□ 0.96
SPE1P08432 NSR1YGR159C 1245 nt21.03■□□□□ 0.96
SPE1P08432 YKL036CYKL036C 393 nt19.83■□□□□ 0.77
SPE1P08432 Q0297Q0297 156 nt18.59■□□□□ 0.57
SPE1P08432 YJL027CYJL027C 417 nt18.58■□□□□ 0.56
SPE1P08432 SRX1YKL086W 384 nt18.42■□□□□ 0.54
SPE1P08432 MDJ1YFL016C 1536 nt18.29■□□□□ 0.52
SPE1P08432 SCS3YGL126W 1143 nt18.25■□□□□ 0.51
SPE1P08432 YCR051WYCR051W 669 nt17.5■□□□□ 0.39
SPE1P08432 YOL085CYOL085C 342 nt17.17■□□□□ 0.34
SPE1P08432 PKP1YIL042C 1185 nt16.85■□□□□ 0.29
SPE1P08432 RPP1BYDL130W 321 nt16.68■□□□□ 0.26
SPE1P08432 SCJ1YMR214W 1134 nt16.67■□□□□ 0.26
SPE1P08432 ATS1YAL020C 1002 nt16.44■□□□□ 0.22
SPE1P08432 TRN1tP(UGG)A 72 nt16.42■□□□□ 0.22
SPE1P08432 SUF9tP(UGG)F 72 nt16.42■□□□□ 0.22
SPE1P08432 SUF8tP(UGG)H 72 nt16.42■□□□□ 0.22
SPE1P08432 tP(UGG)LtP(UGG)L 72 nt16.42■□□□□ 0.22
SPE1P08432 SUF7tP(UGG)M 72 nt16.42■□□□□ 0.22
SPE1P08432 tP(UGG)N1tP(UGG)N1 72 nt16.42■□□□□ 0.22
SPE1P08432 tP(UGG)N2tP(UGG)N2 72 nt16.42■□□□□ 0.22
SPE1P08432 tP(UGG)O1tP(UGG)O1 72 nt16.42■□□□□ 0.22
SPE1P08432 SUF11tP(UGG)O2 72 nt16.42■□□□□ 0.22
SPE1P08432 DBP2YNL112W 1641 nt16.36■□□□□ 0.21
SPE1P08432 CCC1YLR220W 969 nt16.25■□□□□ 0.19
SPE1P08432 PET122YER153C 765 nt15.89■□□□□ 0.13
SPE1P08432 SCR1SCR1 522 nt15.82■□□□□ 0.12
SPE1P08432 tP(UGG)O3tP(UGG)O3 72 nt15.67■□□□□ 0.1
SPE1P08432 YBR190WYBR190W 312 nt15.49■□□□□ 0.07
SPE1P08432 RRN5YLR141W 1092 nt15.48■□□□□ 0.07
SPE1P08432 RVS167YDR388W 1449 nt15.46■□□□□ 0.07
SPE1P08432 RSB1YOR049C 1065 nt15.27■□□□□ 0.04
SPE1P08432 YER088W-BYER088W-B 147 nt15.18■□□□□ 0.02
SPE1P08432 PST2YDR032C 597 nt15.17■□□□□ 0.02
SPE1P08432 RTC3YHR087W 336 nt15.17■□□□□ 0.02
SPE1P08432 YDJ1YNL064C 1230 nt15.15■□□□□ 0.02
SPE1P08432 SHR5YOL110W 714 nt15.03■□□□□ -0
SPE1P08432 YKL097CYKL097C 411 nt14.77□□□□□ -0.05
SPE1P08432 GAR1YHR089C 618 nt14.75□□□□□ -0.05
SPE1P08432 DEP1YAL013W 1218 nt14.46□□□□□ -0.09
SPE1P08432 SHU1YHL006C 453 nt14.45□□□□□ -0.1
SPE1P08432 URN1YPR152C 1398 nt14.35□□□□□ -0.11
SPE1P08432 YNL208WYNL208W 600 nt14.29□□□□□ -0.12
SPE1P08432 PUT4YOR348C 1884 nt14.25□□□□□ -0.13
SPE1P08432 TIR1YER011W 765 nt14.24□□□□□ -0.13
SPE1P08432 RPN10YHR200W 807 nt14.23□□□□□ -0.13
SPE1P08432 SSA3YBL075C 1950 nt14.18□□□□□ -0.14
SPE1P08432 YOR139CYOR139C 393 nt14.11□□□□□ -0.15
SPE1P08432 YAL037C-BYAL037C-B 975 nt14.1□□□□□ -0.15
SPE1P08432 OPI9YLR338W 858 nt14.06□□□□□ -0.16
SPE1P08432 SSA1YAL005C 1929 nt13.99□□□□□ -0.17
SPE1P08432 ARE1YCR048W 1833 nt13.88□□□□□ -0.19
SPE1P08432 NPL3YDR432W 1245 nt13.88□□□□□ -0.19
SPE1P08432 SAH1YER043C 1350 nt13.87□□□□□ -0.19
SPE1P08432 SRB2YHR041C 633 nt13.85□□□□□ -0.19
SPE1P08432 POA1YBR022W 534 nt13.76□□□□□ -0.21
SPE1P08432 YGR021WYGR021W 873 nt13.73□□□□□ -0.21
SPE1P08432 YJR018WYJR018W 363 nt13.72□□□□□ -0.21
SPE1P08432 HOM6YJR139C 1080 nt13.71□□□□□ -0.21
SPE1P08432 MNP1YGL068W 585 nt13.69□□□□□ -0.22
SPE1P08432 WWM1YFL010C 636 nt13.68□□□□□ -0.22
SPE1P08432 YHR049C-AYHR049C-A 297 nt13.66□□□□□ -0.22
SPE1P08432 PUN1YLR414C 792 nt13.66□□□□□ -0.22
SPE1P08432 YOL037CYOL037C 354 nt13.63□□□□□ -0.23
SPE1P08432 YJR120WYJR120W 351 nt13.61□□□□□ -0.23
SPE1P08432 RPP2BYDR382W 333 nt13.55□□□□□ -0.24
SPE1P08432 tM(CAU)CtM(CAU)C 72 nt13.53□□□□□ -0.24
SPE1P08432 IMT4tM(CAU)E 72 nt13.53□□□□□ -0.24
SPE1P08432 IMT3tM(CAU)J3 72 nt13.53□□□□□ -0.24
SPE1P08432 IMT1tM(CAU)O1 72 nt13.53□□□□□ -0.24
SPE1P08432 IMT2tM(CAU)P 72 nt13.53□□□□□ -0.24
SPE1P08432 BSC6YOL137W 1494 nt13.52□□□□□ -0.25
SPE1P08432 RKM5YLR137W 1104 nt13.5□□□□□ -0.25
SPE1P08432 YFL021C-AYFL021C-A 855 nt13.46□□□□□ -0.25
SPE1P08432 PTC2YER089C 1395 nt13.42□□□□□ -0.26
SPE1P08432 BDH2YAL061W 1254 nt13.35□□□□□ -0.27
SPE1P08432 BUD23YCR047C 828 nt13.3□□□□□ -0.28
SPE1P08432 YLR281CYLR281C 468 nt13.29□□□□□ -0.28
SPE1P08432 PUS2YGL063W 1113 nt13.28□□□□□ -0.28
SPE1P08432 LSM3YLR438C-A 270 nt13.26□□□□□ -0.29
SPE1P08432 SPT5YML010W 3192 nt13.26□□□□□ -0.29
SPE1P08432 NAB2YGL122C 1578 nt13.19□□□□□ -0.3
SPE1P08432 INM2YDR287W 879 nt13.18□□□□□ -0.3
SPE1P08432 WHI5YOR083W 888 nt13.18□□□□□ -0.3
SPE1P08432 MOT3YMR070W 1473 nt13.16□□□□□ -0.3
SPE1P08432 YBL100CYBL100C 315 nt13.12□□□□□ -0.31
SPE1P08432 DAL1YIR027C 1383 nt13.1□□□□□ -0.31
SPE1P08432 FPR4YLR449W 1179 nt13.07□□□□□ -0.32
SPE1P08432 FIS1YIL065C 468 nt13.05□□□□□ -0.32
SPE1P08432 TRM9YML014W 840 nt13.03□□□□□ -0.32
SPE1P08432 FUN26YAL022C 1554 nt12.98□□□□□ -0.33
SPE1P08432 PHO4YFR034C 939 nt12.97□□□□□ -0.33
SPE1P08432 YPR011CYPR011C 981 nt12.95□□□□□ -0.34
SPE1P08432 FMP45YDL222C 930 nt12.94□□□□□ -0.34
SPE1P08432 DSK2YMR276W 1122 nt12.94□□□□□ -0.34
SPE1P08432 YLR236CYLR236C 324 nt12.9□□□□□ -0.34
SPE1P08432 CCT6YDR188W 1641 nt12.88□□□□□ -0.35
SPE1P08432 IMP2'YIL154C 1041 nt12.88□□□□□ -0.35
SPE1P08432 YLR154C-GYLR154C-G 150 nt12.88□□□□□ -0.35
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms