RNA–Protein interactions for RNA: YAR003W

SWD1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD1, Length 1,281 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD1YAR003W PAN5P38787 379 aa7.45□□□□□ -1.22
SWD1YAR003W UBP2Q01476 1272 aa7.45□□□□□ -1.22
SWD1YAR003W MFM1Q02783 413 aa7.45□□□□□ -1.22
SWD1YAR003W MMR1Q06324 491 aa7.45□□□□□ -1.22
SWD1YAR003W HIS4P00815 799 aaKnown RBP7.44□□□□□ -1.22
SWD1YAR003W RPL22AP05749 121 aaKnown RBP7.44□□□□□ -1.22
SWD1YAR003W MBR1P23493 339 aa7.44□□□□□ -1.22
SWD1YAR003W MCM3P24279 971 aaKnown RBP7.44□□□□□ -1.22
SWD1YAR003W URA1P28272 314 aaPredicted RBP7.44□□□□□ -1.22
SWD1YAR003W BMH1P29311 267 aaKnown RBP7.44□□□□□ -1.22
SWD1YAR003W SAC6P32599 642 aaKnown RBP7.44□□□□□ -1.22
SWD1YAR003W ERG7P38604 731 aa7.44□□□□□ -1.22
SWD1YAR003W BIM1P40013 344 aa7.44□□□□□ -1.22
SWD1YAR003W YJR098CP47139 656 aa7.44□□□□□ -1.22
SWD1YAR003W ATG1P53104 897 aa7.44□□□□□ -1.22
SWD1YAR003W CUE3P53137 624 aaKnown RBP7.44□□□□□ -1.22
SWD1YAR003W SCW11P53189 542 aa7.44□□□□□ -1.22
SWD1YAR003W CNM67P53865 581 aaKnown RBP7.44□□□□□ -1.22
SWD1YAR003W BUL2Q03758 920 aaKnown RBP7.44□□□□□ -1.22
SWD1YAR003W AIM33Q04516 312 aa7.44□□□□□ -1.22
SWD1YAR003W SVF1Q05515 481 aa7.44□□□□□ -1.22
SWD1YAR003W UTP13Q05946 817 aaKnown RBP7.44□□□□□ -1.22
SWD1YAR003W ISR1Q06098 443 aaKnown RBP7.44□□□□□ -1.22
SWD1YAR003W SPH1Q06160 661 aa7.44□□□□□ -1.22
SWD1YAR003W GUD1Q07729 489 aa7.44□□□□□ -1.22
SWD1YAR003W TY3A-GQ12173 290 aa7.44□□□□□ -1.22
SWD1YAR003W TIF6Q12522 245 aaKnown RBP7.44□□□□□ -1.22
SWD1YAR003W TY3A-IQ99219 290 aa7.44□□□□□ -1.22
SWD1YAR003W EUG1P32474 517 aa7.43□□□□□ -1.22
SWD1YAR003W UTR4P32626 227 aa7.43□□□□□ -1.22
SWD1YAR003W TGL1P34163 548 aa7.43□□□□□ -1.22
SWD1YAR003W ISW1P38144 1129 aa7.43□□□□□ -1.22
SWD1YAR003W NDT80P38830 627 aa7.43□□□□□ -1.22
SWD1YAR003W YER130CP39959 443 aa7.43□□□□□ -1.22
SWD1YAR003W CIT3P43635 486 aa7.43□□□□□ -1.22
SWD1YAR003W YPT11P48559 417 aa7.43□□□□□ -1.22
SWD1YAR003W YGR125WP53273 1036 aa7.43□□□□□ -1.22
SWD1YAR003W VMS1Q04311 632 aaKnown RBP7.43□□□□□ -1.22
SWD1YAR003W SGD1Q06132 899 aa7.43□□□□□ -1.22
SWD1YAR003W PTC5Q12511 572 aa7.43□□□□□ -1.22
SWD1YAR003W SMC6Q12749 1114 aa7.43□□□□□ -1.22
SWD1YAR003W MYO1P08964 1928 aa7.42□□□□□ -1.22
SWD1YAR003W ILV1P00927 576 aaKnown RBP7.42□□□□□ -1.22
SWD1YAR003W TAF13P11747 167 aa7.42□□□□□ -1.22
SWD1YAR003W UGA4P32837 571 aa7.42□□□□□ -1.22
SWD1YAR003W PGM1P33401 570 aaKnown RBP7.42□□□□□ -1.22
SWD1YAR003W MCR1P36060 302 aaKnown RBP7.42□□□□□ -1.22
SWD1YAR003W RRM3P38766 723 aa7.42□□□□□ -1.22
SWD1YAR003W GAA1P39012 614 aa7.42□□□□□ -1.22
SWD1YAR003W ACO2P39533 789 aa7.42□□□□□ -1.22
SWD1YAR003W RIM21P48565 533 aa7.42□□□□□ -1.22
SWD1YAR003W TMA64Q04600 565 aaKnown RBP7.42□□□□□ -1.22
SWD1YAR003W YDL176WQ12027 708 aa7.42□□□□□ -1.22
SWD1YAR003W GPA1P08539 472 aa7.41□□□□□ -1.22
SWD1YAR003W CDC15P27636 974 aa7.41□□□□□ -1.22
SWD1YAR003W SRP40P32583 406 aaPredicted RBP7.41□□□□□ -1.22
SWD1YAR003W SEC8P32855 1065 aa7.41□□□□□ -1.22
SWD1YAR003W NPR3P38742 1146 aa7.41□□□□□ -1.22
SWD1YAR003W ETP1P38748 585 aaKnown RBP7.41□□□□□ -1.22
SWD1YAR003W ATG32P40458 529 aa7.41□□□□□ -1.22
SWD1YAR003W RPL34BP40525 121 aaKnown RBP7.41□□□□□ -1.22
SWD1YAR003W DAK2P43550 591 aa7.41□□□□□ -1.22
SWD1YAR003W YGR153WP48238 217 aa7.41□□□□□ -1.22
SWD1YAR003W UBA2P52488 636 aa7.41□□□□□ -1.22
SWD1YAR003W CBK1P53894 756 aa7.41□□□□□ -1.22
SWD1YAR003W DUS3Q06053 668 aaKnown RBP7.41□□□□□ -1.22
SWD1YAR003W PSR2Q07949 397 aa7.41□□□□□ -1.22
SWD1YAR003W TY1A-BLQ12266 440 aa7.41□□□□□ -1.22
SWD1YAR003W ARP6Q12509 438 aa7.41□□□□□ -1.22
SWD1YAR003W TRS33Q99394 268 aa7.41□□□□□ -1.22
SWD1YAR003W TIF1P10081 395 aaKnown RBP7.4□□□□□ -1.22
SWD1YAR003W CKA2P19454 339 aa7.4□□□□□ -1.22
SWD1YAR003W MCM4P30665 933 aaKnown RBP7.4□□□□□ -1.22
SWD1YAR003W SHP1P34223 423 aa7.4□□□□□ -1.22
SWD1YAR003W SOH1P38633 127 aa7.4□□□□□ -1.22
SWD1YAR003W DLD3P39976 496 aaKnown RBP7.4□□□□□ -1.22
SWD1YAR003W VTC2P43585 828 aa7.4□□□□□ -1.22
SWD1YAR003W ROG3P43602 733 aa7.4□□□□□ -1.22
SWD1YAR003W RSC1P53236 928 aa7.4□□□□□ -1.22
SWD1YAR003W PHR1P05066 565 aaKnown RBP RIP-Chip data7.39□□□□□ -1.23not detected
SWD1YAR003W SPT2P06843 333 aaPredicted RBP7.39□□□□□ -1.23
SWD1YAR003W MOT2P34909 587 aaKnown RBP7.39□□□□□ -1.23
SWD1YAR003W NOC2P39744 710 aaKnown RBP7.39□□□□□ -1.23
SWD1YAR003W VPS53P47061 822 aa7.39□□□□□ -1.23
SWD1YAR003W ZPR1P53303 486 aaKnown RBP7.39□□□□□ -1.23
SWD1YAR003W CAF120P53836 1060 aa7.39□□□□□ -1.23
SWD1YAR003W KRE33P53914 1056 aaKnown RBP7.39□□□□□ -1.23
SWD1YAR003W ORC4P54791 529 aa7.39□□□□□ -1.23
SWD1YAR003W PTA1Q01329 785 aaPredicted RBP7.39□□□□□ -1.23
SWD1YAR003W SLD5Q03406 294 aa7.39□□□□□ -1.23
SWD1YAR003W LCD1Q04377 747 aa7.39□□□□□ -1.23
SWD1YAR003W PHM6Q05637 104 aa7.39□□□□□ -1.23
SWD1YAR003W HCR1Q05775 265 aaKnown RBP7.39□□□□□ -1.23
SWD1YAR003W YLR225CQ05948 407 aaKnown RBP7.39□□□□□ -1.23
SWD1YAR003W ISA1Q07821 250 aaPredicted RBP7.39□□□□□ -1.23
SWD1YAR003W TLG2Q08144 397 aa7.39□□□□□ -1.23
SWD1YAR003W FOB1O13329 566 aa7.38□□□□□ -1.23
SWD1YAR003W PGK1P00560 416 aaKnown RBP7.38□□□□□ -1.23
SWD1YAR003W TKL1P23254 680 aaKnown RBP7.38□□□□□ -1.23
SWD1YAR003W HIR1P32479 840 aa7.38□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms