RNA–Protein interactions for RNA: YDL049C

KNH1, Transcript of Protein with similarity to Kre9p, yeast

Gene KNH1, Length 807 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KNH1	YDL049C	CDC16	P09798	840 aa		6.3	□□□□□ -1.4
KNH1	YDL049C	RIT1	P23796	513 aa		6.3	□□□□□ -1.4
KNH1	YDL049C	IRE1	P32361	1115 aa		6.3	□□□□□ -1.4
KNH1	YDL049C	SEC8	P32855	1065 aa		6.3	□□□□□ -1.4
KNH1	YDL049C	FLR1	P38124	548 aa		6.3	□□□□□ -1.4
KNH1	YDL049C	REG2	P38232	338 aa		6.3	□□□□□ -1.4
KNH1	YDL049C	RSC8	P43609	557 aa	Known RBP	6.3	□□□□□ -1.4
KNH1	YDL049C	UTP4	Q06679	776 aa	Known RBP	6.3	□□□□□ -1.4
KNH1	YDL049C	CAD1	P24813	409 aa	Known RBP	6.29	□□□□□ -1.4
KNH1	YDL049C	ANP1	P32629	500 aa		6.29	□□□□□ -1.4
KNH1	YDL049C	SIS2	P36024	562 aa		6.29	□□□□□ -1.4
KNH1	YDL049C	VPS45	P38932	577 aa		6.29	□□□□□ -1.4
KNH1	YDL049C	JHD1	P40034	492 aa		6.29	□□□□□ -1.4
KNH1	YDL049C	CTR1	P49573	406 aa		6.29	□□□□□ -1.4
KNH1	YDL049C	VPS72	Q03388	795 aa		6.29	□□□□□ -1.4
KNH1	YDL049C	OPT2	Q06593	877 aa		6.29	□□□□□ -1.4
KNH1	YDL049C	NOB1	Q08444	459 aa	Known RBP	6.29	□□□□□ -1.4
KNH1	YDL049C	VAC17	P25591	423 aa		6.28	□□□□□ -1.4
KNH1	YDL049C	POA1	P38218	177 aa		6.28	□□□□□ -1.4
KNH1	YDL049C	NDT80	P38830	627 aa		6.28	□□□□□ -1.4
KNH1	YDL049C	STM1	P39015	273 aa	Known RBP	6.28	□□□□□ -1.4
KNH1	YDL049C	HDA1	P53973	706 aa		6.28	□□□□□ -1.4
KNH1	YDL049C	TOR2	P32600	2474 aa	Known RBP	6.28	□□□□□ -1.4
KNH1	YDL049C	MAS2	P11914	482 aa		6.27	□□□□□ -1.41
KNH1	YDL049C	SNA3	P14359	133 aa		6.27	□□□□□ -1.41
KNH1	YDL049C	SRP54	P20424	541 aa	Known RBP	6.27	□□□□□ -1.41
KNH1	YDL049C	RPL8B	P29453	256 aa	Known RBP	6.27	□□□□□ -1.41
KNH1	YDL049C	BIO2	P32451	375 aa		6.27	□□□□□ -1.41
KNH1	YDL049C	DUR3	P33413	735 aa		6.27	□□□□□ -1.41
KNH1	YDL049C	SGM1	P47166	707 aa		6.27	□□□□□ -1.41
KNH1	YDL049C	MCM6	P53091	1017 aa	Known RBP	6.27	□□□□□ -1.41
KNH1	YDL049C	CAF120	P53836	1060 aa		6.27	□□□□□ -1.41
KNH1	YDL049C	RPT6	Q01939	405 aa	Known RBP	6.27	□□□□□ -1.41
KNH1	YDL049C	RKM4	Q12504	494 aa		6.27	□□□□□ -1.41
KNH1	YDL049C	TY1B-A	O13527	1196 aa	Known RBP	6.26	□□□□□ -1.41
KNH1	YDL049C	SEC20	P28791	383 aa		6.26	□□□□□ -1.41
KNH1	YDL049C	PRS1	P32895	427 aa	Known RBP	6.26	□□□□□ -1.41
KNH1	YDL049C	AZR1	P50080	613 aa		6.26	□□□□□ -1.41
KNH1	YDL049C	LIF1	P53150	421 aa		6.26	□□□□□ -1.41
KNH1	YDL049C	YNR014W	P53719	212 aa		6.26	□□□□□ -1.41
KNH1	YDL049C	PTA1	Q01329	785 aa	Predicted RBP	6.26	□□□□□ -1.41
KNH1	YDL049C	MSC2	Q03455	724 aa		6.26	□□□□□ -1.41
KNH1	YDL049C	MYO5	Q04439	1219 aa	Known RBP	6.26	□□□□□ -1.41
KNH1	YDL049C	SSF2	Q12153	453 aa	Predicted RBP	6.26	□□□□□ -1.41
KNH1	YDL049C	UBR2	Q07963	1872 aa		6.26	□□□□□ -1.41
KNH1	YDL049C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	6.25	□□□□□ -1.41	not detected
KNH1	YDL049C	RFC1	P38630	861 aa	Known RBP	6.25	□□□□□ -1.41
KNH1	YDL049C	TVP23	P38962	199 aa		6.25	□□□□□ -1.41
KNH1	YDL049C	ACO2	P39533	789 aa		6.25	□□□□□ -1.41
KNH1	YDL049C	RPS7B	P48164	190 aa	Known RBP	6.25	□□□□□ -1.41
KNH1	YDL049C	FMS1	P50264	508 aa		6.25	□□□□□ -1.41
KNH1	YDL049C	LSB1	P53281	241 aa		6.25	□□□□□ -1.41
KNH1	YDL049C	ESF1	Q06344	628 aa	Known RBP	6.25	□□□□□ -1.41
KNH1	YDL049C	CLF1	Q12309	687 aa	Predicted RBP	6.25	□□□□□ -1.41
KNH1	YDL049C	ATG11	Q12527	1178 aa		6.25	□□□□□ -1.41
KNH1	YDL049C	UGA4	P32837	571 aa		6.24	□□□□□ -1.41
KNH1	YDL049C	CRG1	P38892	291 aa	RIP-Chip data	6.24	□□□□□ -1.41	not detected
KNH1	YDL049C	CSM2	P40465	213 aa		6.24	□□□□□ -1.41
KNH1	YDL049C	YNL108C	P53929	270 aa		6.24	□□□□□ -1.41
KNH1	YDL049C	DOS2	P54858	310 aa		6.24	□□□□□ -1.41
KNH1	YDL049C	FPR4	Q06205	392 aa	Predicted RBP	6.24	□□□□□ -1.41
KNH1	YDL049C	RIM20	Q12033	661 aa		6.24	□□□□□ -1.41
KNH1	YDL049C	DAP1	Q12091	152 aa		6.24	□□□□□ -1.41
KNH1	YDL049C	MAK31	P23059	88 aa		6.23	□□□□□ -1.41
KNH1	YDL049C	INP51	P40559	946 aa	Known RBP	6.23	□□□□□ -1.41
KNH1	YDL049C	NUP85	P46673	744 aa		6.23	□□□□□ -1.41
KNH1	YDL049C	MDM1	Q01846	1127 aa		6.23	□□□□□ -1.41
KNH1	YDL049C	SPN1	Q06505	410 aa	Predicted RBP	6.23	□□□□□ -1.41
KNH1	YDL049C	SWI6	P09959	803 aa		6.22	□□□□□ -1.41
KNH1	YDL049C	KIN82	P25341	720 aa		6.22	□□□□□ -1.41
KNH1	YDL049C	RER2	P35196	286 aa		6.22	□□□□□ -1.41
KNH1	YDL049C	SPC42	P36094	363 aa		6.22	□□□□□ -1.41
KNH1	YDL049C	GLY1	P37303	387 aa	Known RBP	6.22	□□□□□ -1.41
KNH1	YDL049C	ALD5	P40047	520 aa	Known RBP	6.22	□□□□□ -1.41
KNH1	YDL049C	YGR035C	P53222	116 aa		6.22	□□□□□ -1.41
KNH1	YDL049C	YML083C	Q04526	418 aa		6.22	□□□□□ -1.41
KNH1	YDL049C	YLR346C	Q06139	101 aa		6.22	□□□□□ -1.41
KNH1	YDL049C	NKP2	Q06162	153 aa		6.22	□□□□□ -1.41
KNH1	YDL049C	TFC6	Q06339	672 aa		6.22	□□□□□ -1.41
KNH1	YDL049C	PUP1	P25043	261 aa		6.21	□□□□□ -1.42
KNH1	YDL049C	AAP1	P37898	856 aa	Known RBP	6.21	□□□□□ -1.42
KNH1	YDL049C	OCA5	P38738	679 aa		6.21	□□□□□ -1.42
KNH1	YDL049C	NNF1	P47149	201 aa		6.21	□□□□□ -1.42
KNH1	YDL049C	UBP15	P50101	1230 aa		6.21	□□□□□ -1.42
KNH1	YDL049C	ECM16	Q04217	1267 aa	Known RBP	6.21	□□□□□ -1.42
KNH1	YDL049C	EMI2	Q04409	500 aa	Known RBP	6.21	□□□□□ -1.42
KNH1	YDL049C	DSE3	Q08729	430 aa		6.21	□□□□□ -1.42
KNH1	YDL049C	YLL058W	Q12198	575 aa		6.21	□□□□□ -1.42
KNH1	YDL049C	MOT1	P32333	1867 aa		6.21	□□□□□ -1.42
KNH1	YDL049C	PAN5	P38787	379 aa		6.2	□□□□□ -1.42
KNH1	YDL049C	FMP10	P40098	244 aa		6.2	□□□□□ -1.42
KNH1	YDL049C	AAD14	P42884	376 aa		6.2	□□□□□ -1.42
KNH1	YDL049C	SPO74	P45819	413 aa		6.2	□□□□□ -1.42
KNH1	YDL049C	INP52	P50942	1183 aa		6.2	□□□□□ -1.42
KNH1	YDL049C	VIP1	Q06685	1146 aa	Known RBP	6.2	□□□□□ -1.42
KNH1	YDL049C	SPT2	P06843	333 aa	Predicted RBP	6.19	□□□□□ -1.42
KNH1	YDL049C	IDI1	P15496	288 aa		6.19	□□□□□ -1.42
KNH1	YDL049C	RPL8A	P17076	256 aa	Known RBP	6.19	□□□□□ -1.42
KNH1	YDL049C	FUB1	P25659	250 aa		6.19	□□□□□ -1.42
KNH1	YDL049C	URK1	P27515	501 aa		6.19	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 58.9 ms