RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C EXO5P38289 585 aa6.01□□□□□ -1.45
SNF8YPL002C RVS167P39743 482 aaKnown RBP6.01□□□□□ -1.45
SNF8YPL002C YVC1Q12324 675 aa6.01□□□□□ -1.45
SNF8YPL002C BCK1Q01389 1478 aa6.01□□□□□ -1.45
SNF8YPL002C NFS1P25374 497 aa6□□□□□ -1.45
SNF8YPL002C SLS1P42900 643 aa6□□□□□ -1.45
SNF8YPL002C ECL1P48235 211 aa6□□□□□ -1.45
SNF8YPL002C YNR029CP53729 429 aaKnown RBP6□□□□□ -1.45
SNF8YPL002C KRE5P22023 1365 aa6□□□□□ -1.45
SNF8YPL002C SMY2P32909 740 aaKnown RBP5.99□□□□□ -1.45
SNF8YPL002C ARL1P38116 183 aaKnown RBP5.99□□□□□ -1.45
SNF8YPL002C NEM1P38757 446 aa5.99□□□□□ -1.45
SNF8YPL002C SAM37P50110 327 aa5.99□□□□□ -1.45
SNF8YPL002C IMH1Q06704 911 aaKnown RBP5.99□□□□□ -1.45
SNF8YPL002C PEX7P39108 375 aa5.98□□□□□ -1.45
SNF8YPL002C UBP5P39944 805 aa5.98□□□□□ -1.45
SNF8YPL002C SSY1Q03770 852 aa5.98□□□□□ -1.45
SNF8YPL002C AVO1Q08236 1176 aa5.98□□□□□ -1.45
SNF8YPL002C TRE1Q08919 783 aa5.98□□□□□ -1.45
SNF8YPL002C YKL077WP36081 392 aa5.97□□□□□ -1.45
SNF8YPL002C YHL050CP38721 697 aa5.97□□□□□ -1.45
SNF8YPL002C YHR219WP38900 624 aa5.97□□□□□ -1.45
SNF8YPL002C YCS4Q06156 1176 aa5.97□□□□□ -1.45
SNF8YPL002C CFT1Q06632 1357 aaKnown RBP5.96□□□□□ -1.45
SNF8YPL002C GAS1P22146 559 aaKnown RBP5.96□□□□□ -1.46
SNF8YPL002C ADP1P25371 1049 aa5.96□□□□□ -1.46
SNF8YPL002C UGA4P32837 571 aa5.96□□□□□ -1.46
SNF8YPL002C NNK1P36003 928 aa5.96□□□□□ -1.46
SNF8YPL002C CIC1P38779 376 aaKnown RBP5.96□□□□□ -1.46
SNF8YPL002C PRO1P32264 428 aa5.95□□□□□ -1.46
SNF8YPL002C NIT1P40447 199 aa5.95□□□□□ -1.46
SNF8YPL002C NOG1Q02892 647 aaKnown RBP5.95□□□□□ -1.46
SNF8YPL002C LPX1Q12405 387 aaKnown RBP5.95□□□□□ -1.46
SNF8YPL002C TSA1P34760 196 aaKnown RBP5.94□□□□□ -1.46
SNF8YPL002C SHU2P38957 223 aa5.94□□□□□ -1.46
SNF8YPL002C CDA2Q06703 312 aa5.94□□□□□ -1.46
SNF8YPL002C PUS7Q08647 676 aaKnown RBP5.94□□□□□ -1.46
SNF8YPL002C MSH3P25336 1018 aa5.93□□□□□ -1.46
SNF8YPL002C PRP40P33203 583 aaKnown RBP5.93□□□□□ -1.46
SNF8YPL002C ORC3P54790 616 aa5.93□□□□□ -1.46
SNF8YPL002C PHO4P07270 312 aaKnown RBP5.92□□□□□ -1.46
SNF8YPL002C UGA2P38067 497 aa5.92□□□□□ -1.46
SNF8YPL002C PTC7P38797 343 aa5.92□□□□□ -1.46
SNF8YPL002C NMD3P38861 518 aaKnown RBP5.92□□□□□ -1.46
SNF8YPL002C YAR028WP39548 234 aa5.92□□□□□ -1.46
SNF8YPL002C TPP1Q03796 238 aa5.92□□□□□ -1.46
SNF8YPL002C UTP5Q04177 643 aaKnown RBP5.92□□□□□ -1.46
SNF8YPL002C TOS4Q06266 489 aa5.92□□□□□ -1.46
SNF8YPL002C SSF1P38789 453 aaPredicted RBP5.91□□□□□ -1.46
SNF8YPL002C GTS1P40956 396 aa5.91□□□□□ -1.46
SNF8YPL002C MTR4P47047 1073 aaKnown RBP5.91□□□□□ -1.46
SNF8YPL002C PRP43P53131 767 aaKnown RBP5.91□□□□□ -1.46
SNF8YPL002C PEX13P80667 386 aa5.91□□□□□ -1.46
SNF8YPL002C PRP45P28004 379 aaPredicted RBP5.9□□□□□ -1.46
SNF8YPL002C MET4P32389 672 aa5.9□□□□□ -1.46
SNF8YPL002C ULP1Q02724 621 aa5.9□□□□□ -1.46
SNF8YPL002C DAL4Q04895 635 aa5.9□□□□□ -1.46
SNF8YPL002C YLR257WQ06146 321 aaKnown RBP5.9□□□□□ -1.46
SNF8YPL002C RET1P22276 1149 aaKnown RBP5.89□□□□□ -1.47
SNF8YPL002C VPS35P34110 944 aa5.89□□□□□ -1.47
SNF8YPL002C TAF5P38129 798 aa5.89□□□□□ -1.47
SNF8YPL002C XKS1P42826 600 aa5.89□□□□□ -1.47
SNF8YPL002C GCD6P32501 712 aaKnown RBP5.88□□□□□ -1.47
SNF8YPL002C DAK2P43550 591 aa5.88□□□□□ -1.47
SNF8YPL002C RSM26P47141 266 aa5.88□□□□□ -1.47
SNF8YPL002C RSA3Q05942 220 aaKnown RBP5.88□□□□□ -1.47
SNF8YPL002C YDL177CQ12257 170 aa5.88□□□□□ -1.47
SNF8YPL002C YRF1-2P40105 1681 aa5.88□□□□□ -1.47
SNF8YPL002C RPN11P43588 306 aaKnown RBP5.87□□□□□ -1.47
SNF8YPL002C YNR063WP53749 607 aa5.87□□□□□ -1.47
SNF8YPL002C WHI5Q12416 295 aa5.87□□□□□ -1.47
SNF8YPL002C GCN2P15442 1659 aa5.87□□□□□ -1.47
SNF8YPL002C SAM35P14693 329 aa5.86□□□□□ -1.47
SNF8YPL002C VMA4P22203 233 aaKnown RBP5.86□□□□□ -1.47
SNF8YPL002C THI80P35202 319 aa5.86□□□□□ -1.47
SNF8YPL002C PAF1P38351 445 aa5.86□□□□□ -1.47
SNF8YPL002C PPX1P38698 397 aa5.86□□□□□ -1.47
SNF8YPL002C PEX28P38848 579 aa5.86□□□□□ -1.47
SNF8YPL002C HEM13P11353 328 aaKnown RBP5.85□□□□□ -1.47
SNF8YPL002C KAR2P16474 682 aaKnown RBP5.85□□□□□ -1.47
SNF8YPL002C NAP1P25293 417 aaKnown RBP5.85□□□□□ -1.47
SNF8YPL002C SQT1P35184 431 aa5.85□□□□□ -1.47
SNF8YPL002C RDH54P38086 958 aa5.85□□□□□ -1.47
SNF8YPL002C YHL012WP38709 493 aa5.85□□□□□ -1.47
SNF8YPL002C MSC6Q08818 692 aaKnown RBP5.85□□□□□ -1.47
SNF8YPL002C RRP5Q05022 1729 aaKnown RBP5.85□□□□□ -1.47
SNF8YPL002C TY3B-IQ7LHG5 1498 aaKnown RBP5.84□□□□□ -1.47
SNF8YPL002C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.84□□□□□ -1.47not detected
SNF8YPL002C YJL045WP47052 634 aa5.84□□□□□ -1.47
SNF8YPL002C YCR015CP25616 317 aa5.83□□□□□ -1.48
SNF8YPL002C ETP1P38748 585 aaKnown RBP5.83□□□□□ -1.48
SNF8YPL002C HSE1P38753 452 aa5.83□□□□□ -1.48
SNF8YPL002C FAA3P39002 694 aa5.83□□□□□ -1.48
SNF8YPL002C STM1P39015 273 aaKnown RBP5.83□□□□□ -1.48
SNF8YPL002C TAF1P46677 1066 aa5.83□□□□□ -1.48
SNF8YPL002C YGL140CP53120 1219 aa5.83□□□□□ -1.48
SNF8YPL002C YPL109CQ02981 657 aa5.83□□□□□ -1.48
SNF8YPL002C ESC8Q08119 714 aa5.83□□□□□ -1.48
SNF8YPL002C LAP2Q10740 671 aa5.83□□□□□ -1.48
SNF8YPL002C RAD9P14737 1309 aa5.82□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms