RNA–Protein interactions for RNA: YJR040W

GEF1, Transcript of Voltage-gated chloride channel, yeastyeast

Gene GEF1, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEF1YJR040W MAK31P23059 88 aa6.97□□□□□ -1.29
GEF1YJR040W SEC65P29478 273 aa6.97□□□□□ -1.29
GEF1YJR040W ECM32P32644 1121 aaKnown RBP6.97□□□□□ -1.29
GEF1YJR040W BMH2P34730 273 aaKnown RBP6.97□□□□□ -1.29
GEF1YJR040W MAL31P38156 614 aa6.97□□□□□ -1.29
GEF1YJR040W AKR1P39010 764 aa6.97□□□□□ -1.29
GEF1YJR040W VPS8P39702 1274 aa6.97□□□□□ -1.29
GEF1YJR040W CAF130P53280 1122 aaPredicted RBP6.97□□□□□ -1.29
GEF1YJR040W TFC6Q06339 672 aa6.97□□□□□ -1.29
GEF1YJR040W PMA1P05030 918 aaKnown RBP6.96□□□□□ -1.29
GEF1YJR040W CBP1P07252 654 aa6.96□□□□□ -1.29
GEF1YJR040W STO1P34160 861 aaKnown RBP6.96□□□□□ -1.29
GEF1YJR040W SPT8P38915 602 aa6.96□□□□□ -1.29
GEF1YJR040W RSC8P43609 557 aaKnown RBP6.96□□□□□ -1.29
GEF1YJR040W PEX21P50091 288 aa6.96□□□□□ -1.29
GEF1YJR040W MYO5Q04439 1219 aaKnown RBP6.96□□□□□ -1.29
GEF1YJR040W DCS2Q12123 353 aa6.96□□□□□ -1.29
GEF1YJR040W ATG9Q12142 997 aa6.96□□□□□ -1.29
GEF1YJR040W RNR3P21672 869 aaKnown RBP6.96□□□□□ -1.3
GEF1YJR040W DAL7P21826 554 aa6.96□□□□□ -1.3
GEF1YJR040W RIT1P23796 513 aa6.96□□□□□ -1.3
GEF1YJR040W CCT4P39078 528 aaKnown RBP6.96□□□□□ -1.3
GEF1YJR040W PEA2P40091 420 aa6.96□□□□□ -1.3
GEF1YJR040W ORM2Q06144 216 aa6.96□□□□□ -1.3
GEF1YJR040W YDL124WQ07551 312 aaKnown RBP6.96□□□□□ -1.3
GEF1YJR040W TYW1Q08960 810 aaKnown RBP6.96□□□□□ -1.3
GEF1YJR040W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.96□□□□□ -1.3not detected
GEF1YJR040W TUS1Q06412 1307 aa6.96□□□□□ -1.3
GEF1YJR040W CDC6P09119 513 aa6.95□□□□□ -1.3
GEF1YJR040W VPS1P21576 704 aaKnown RBP6.95□□□□□ -1.3
GEF1YJR040W URA1P28272 314 aaPredicted RBP6.95□□□□□ -1.3
GEF1YJR040W ADE17P38009 592 aaKnown RBP6.95□□□□□ -1.3
GEF1YJR040W HOS4P40480 1083 aa6.95□□□□□ -1.3
GEF1YJR040W RPT6Q01939 405 aaKnown RBP6.95□□□□□ -1.3
GEF1YJR040W GFD1Q04839 188 aaKnown RBP6.95□□□□□ -1.3
GEF1YJR040W CSC1Q06538 782 aa6.95□□□□□ -1.3
GEF1YJR040W YOR223WQ12015 292 aa6.95□□□□□ -1.3
GEF1YJR040W CSR2Q12734 1121 aa6.95□□□□□ -1.3
GEF1YJR040W PRP16P15938 1071 aaPredicted RBP6.95□□□□□ -1.3
GEF1YJR040W KAR3P17119 729 aa6.95□□□□□ -1.3
GEF1YJR040W GAP1P19145 602 aaPredicted RBP6.95□□□□□ -1.3
GEF1YJR040W PHO13P19881 312 aa6.95□□□□□ -1.3
GEF1YJR040W RRP1P35178 278 aaPredicted RBP6.95□□□□□ -1.3
GEF1YJR040W MUD2P36084 527 aaKnown RBP6.95□□□□□ -1.3
GEF1YJR040W YBL028CP38202 106 aa6.95□□□□□ -1.3
GEF1YJR040W TOM71P38825 639 aaKnown RBP6.95□□□□□ -1.3
GEF1YJR040W RUD3Q12234 484 aaKnown RBP6.95□□□□□ -1.3
GEF1YJR040W YVC1Q12324 675 aa6.95□□□□□ -1.3
GEF1YJR040W RPO26P20435 155 aa6.94□□□□□ -1.3
GEF1YJR040W SIT1P39980 628 aa6.94□□□□□ -1.3
GEF1YJR040W GDE1Q02979 1223 aa6.94□□□□□ -1.3
GEF1YJR040W CWC15Q03772 175 aaKnown RBP6.94□□□□□ -1.3
GEF1YJR040W VPS38Q05919 439 aa6.94□□□□□ -1.3
GEF1YJR040W PUS5Q06244 254 aa6.94□□□□□ -1.3
GEF1YJR040W CMS1Q07897 291 aaKnown RBP6.94□□□□□ -1.3
GEF1YJR040W ARD1P07347 238 aaPredicted RBP6.94□□□□□ -1.3
GEF1YJR040W SWI4P25302 1093 aaKnown RBP6.94□□□□□ -1.3
GEF1YJR040W KEL1P38853 1164 aaKnown RBP6.94□□□□□ -1.3
GEF1YJR040W RRT6P53117 311 aaPredicted RBP6.94□□□□□ -1.3
GEF1YJR040W LCB5Q06147 687 aaKnown RBP6.94□□□□□ -1.3
GEF1YJR040W CEX1Q12453 761 aa6.94□□□□□ -1.3
GEF1YJR040W GSC2P40989 1895 aa6.93□□□□□ -1.3
GEF1YJR040W MRPS28P21771 286 aa6.93□□□□□ -1.3
GEF1YJR040W DPB3P27344 201 aa6.93□□□□□ -1.3
GEF1YJR040W RPL8BP29453 256 aaKnown RBP6.93□□□□□ -1.3
GEF1YJR040W YET1P35723 206 aa6.93□□□□□ -1.3
GEF1YJR040W FOL1P53848 824 aa6.93□□□□□ -1.3
GEF1YJR040W HDA1P53973 706 aa6.93□□□□□ -1.3
GEF1YJR040W EIS1Q05050 843 aaKnown RBP6.93□□□□□ -1.3
GEF1YJR040W ATG23Q06671 453 aa6.93□□□□□ -1.3
GEF1YJR040W CDC37P06101 506 aaKnown RBP6.93□□□□□ -1.3
GEF1YJR040W ERG12P07277 443 aa6.93□□□□□ -1.3
GEF1YJR040W RPS6AP0CX37 236 aaKnown RBP6.93□□□□□ -1.3
GEF1YJR040W RPS6BP0CX38 236 aaPredicted RBP6.93□□□□□ -1.3
GEF1YJR040W PRE10P21242 288 aaKnown RBP RIP-Chip data6.93□□□□□ -1.3not detected
GEF1YJR040W PRO3P32263 286 aaKnown RBP6.93□□□□□ -1.3
GEF1YJR040W RPC82P32349 654 aa6.93□□□□□ -1.3
GEF1YJR040W TIF4631P39935 952 aaKnown RBP6.93□□□□□ -1.3
GEF1YJR040W SOL4P53315 255 aa6.93□□□□□ -1.3
GEF1YJR040W SUB2Q07478 446 aaKnown RBP6.93□□□□□ -1.3
GEF1YJR040W PSR2Q07949 397 aa6.93□□□□□ -1.3
GEF1YJR040W GET3Q12154 354 aaKnown RBP6.93□□□□□ -1.3
GEF1YJR040W SMC6Q12749 1114 aa6.93□□□□□ -1.3
GEF1YJR040W KRS1P15180 591 aaKnown RBP6.92□□□□□ -1.3
GEF1YJR040W SHM1P37292 490 aaPredicted RBP6.92□□□□□ -1.3
GEF1YJR040W HUL4P40985 892 aa6.92□□□□□ -1.3
GEF1YJR040W PTK2P47116 818 aaKnown RBP6.92□□□□□ -1.3
GEF1YJR040W NAF1P53919 492 aaKnown RBP6.92□□□□□ -1.3
GEF1YJR040W ARO80Q04052 950 aa6.92□□□□□ -1.3
GEF1YJR040W NUC1P08466 329 aa6.92□□□□□ -1.3
GEF1YJR040W RXT2P38255 430 aa6.92□□□□□ -1.3
GEF1YJR040W CSM2P40465 213 aa6.92□□□□□ -1.3
GEF1YJR040W IAH1P41734 238 aa6.92□□□□□ -1.3
GEF1YJR040W CUE3P53137 624 aaKnown RBP6.92□□□□□ -1.3
GEF1YJR040W ALF1P53904 254 aa6.92□□□□□ -1.3
GEF1YJR040W RRP6Q12149 733 aaKnown RBP6.92□□□□□ -1.3
GEF1YJR040W YOR111WQ99210 232 aa6.92□□□□□ -1.3
GEF1YJR040W UBP14P38237 781 aaKnown RBP6.91□□□□□ -1.3
GEF1YJR040W VPS45P38932 577 aa6.91□□□□□ -1.3
GEF1YJR040W VHR2P40041 505 aa6.91□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 54.4 ms