Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC32.46■■■□□ 2.79
PCDHGA6Q9Y5G7 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC32■■■□□ 2.71
PCDHGA6Q9Y5G7 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
PCDHGA6Q9Y5G7 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC31.48■■■□□ 2.63
PCDHGA6Q9Y5G7 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PCDHGA6Q9Y5G7 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
PCDHGA6Q9Y5G7 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.6
PCDHGA6Q9Y5G7 AL356512.1-201ENST00000607453 1739 ntBASIC31.07■■■□□ 2.56
PCDHGA6Q9Y5G7 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
PCDHGA6Q9Y5G7 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
PCDHGA6Q9Y5G7 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC30.59■■■□□ 2.49
PCDHGA6Q9Y5G7 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC30.47■■■□□ 2.47
PCDHGA6Q9Y5G7 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC30.43■■■□□ 2.46
PCDHGA6Q9Y5G7 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC30.36■■■□□ 2.45
PCDHGA6Q9Y5G7 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC30.31■■■□□ 2.44
PCDHGA6Q9Y5G7 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC30.29■■■□□ 2.44
PCDHGA6Q9Y5G7 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC30.17■■■□□ 2.42
PCDHGA6Q9Y5G7 HES6-203ENST00000409160 1600 ntTSL 2 BASIC30.14■■■□□ 2.41
PCDHGA6Q9Y5G7 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
PCDHGA6Q9Y5G7 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
PCDHGA6Q9Y5G7 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
PCDHGA6Q9Y5G7 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
PCDHGA6Q9Y5G7 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC29.88■■■□□ 2.37
PCDHGA6Q9Y5G7 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
PCDHGA6Q9Y5G7 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
PCDHGA6Q9Y5G7 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
PCDHGA6Q9Y5G7 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC29.69■■■□□ 2.34
PCDHGA6Q9Y5G7 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
PCDHGA6Q9Y5G7 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
PCDHGA6Q9Y5G7 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
PCDHGA6Q9Y5G7 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC29.55■■■□□ 2.32
PCDHGA6Q9Y5G7 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
PCDHGA6Q9Y5G7 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC29.52■■■□□ 2.32
PCDHGA6Q9Y5G7 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
PCDHGA6Q9Y5G7 INO80B-203ENST00000409917 796 ntTSL 2 BASIC29.36■■■□□ 2.29
PCDHGA6Q9Y5G7 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC29.36■■■□□ 2.29
PCDHGA6Q9Y5G7 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
PCDHGA6Q9Y5G7 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
PCDHGA6Q9Y5G7 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC29.13■■■□□ 2.25
PCDHGA6Q9Y5G7 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
PCDHGA6Q9Y5G7 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC29.07■■■□□ 2.24
PCDHGA6Q9Y5G7 AC006077.2-201ENST00000623591 457 ntBASIC29.07■■■□□ 2.24
PCDHGA6Q9Y5G7 ZNRF2P1-201ENST00000441407 443 ntBASIC29■■■□□ 2.23
PCDHGA6Q9Y5G7 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC29■■■□□ 2.23
PCDHGA6Q9Y5G7 AC015813.7-201ENST00000623294 581 ntBASIC29■■■□□ 2.23
PCDHGA6Q9Y5G7 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
PCDHGA6Q9Y5G7 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC28.97■■■□□ 2.23
PCDHGA6Q9Y5G7 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC28.93■■■□□ 2.22
PCDHGA6Q9Y5G7 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC28.92■■■□□ 2.22
PCDHGA6Q9Y5G7 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC28.92■■■□□ 2.22
PCDHGA6Q9Y5G7 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC28.87■■■□□ 2.21
PCDHGA6Q9Y5G7 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
PCDHGA6Q9Y5G7 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
PCDHGA6Q9Y5G7 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
PCDHGA6Q9Y5G7 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
PCDHGA6Q9Y5G7 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC28.69■■■□□ 2.18
PCDHGA6Q9Y5G7 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC28.69■■■□□ 2.18
PCDHGA6Q9Y5G7 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC28.67■■■□□ 2.18
PCDHGA6Q9Y5G7 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
PCDHGA6Q9Y5G7 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
PCDHGA6Q9Y5G7 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
PCDHGA6Q9Y5G7 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
PCDHGA6Q9Y5G7 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC28.43■■■□□ 2.14
PCDHGA6Q9Y5G7 AP002365.1-201ENST00000603448 772 ntBASIC28.26■■■□□ 2.11
PCDHGA6Q9Y5G7 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
PCDHGA6Q9Y5G7 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PCDHGA6Q9Y5G7 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.1
PCDHGA6Q9Y5G7 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PCDHGA6Q9Y5G7 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC28.15■■■□□ 2.1
PCDHGA6Q9Y5G7 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC28.14■■■□□ 2.1
PCDHGA6Q9Y5G7 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
PCDHGA6Q9Y5G7 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
PCDHGA6Q9Y5G7 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PCDHGA6Q9Y5G7 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC28.08■■■□□ 2.09
PCDHGA6Q9Y5G7 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC28.07■■■□□ 2.08
PCDHGA6Q9Y5G7 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
PCDHGA6Q9Y5G7 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC28.06■■■□□ 2.08
PCDHGA6Q9Y5G7 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC28.05■■■□□ 2.08
PCDHGA6Q9Y5G7 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC28.03■■■□□ 2.08
PCDHGA6Q9Y5G7 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
PCDHGA6Q9Y5G7 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC27.98■■■□□ 2.07
PCDHGA6Q9Y5G7 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
PCDHGA6Q9Y5G7 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC27.96■■■□□ 2.07
PCDHGA6Q9Y5G7 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC27.95■■■□□ 2.06
PCDHGA6Q9Y5G7 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC27.95■■■□□ 2.06
PCDHGA6Q9Y5G7 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
PCDHGA6Q9Y5G7 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC27.94■■■□□ 2.06
PCDHGA6Q9Y5G7 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
PCDHGA6Q9Y5G7 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC27.92■■■□□ 2.06
PCDHGA6Q9Y5G7 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
PCDHGA6Q9Y5G7 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC27.92■■■□□ 2.06
PCDHGA6Q9Y5G7 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC27.91■■■□□ 2.06
PCDHGA6Q9Y5G7 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC27.91■■■□□ 2.06
PCDHGA6Q9Y5G7 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
PCDHGA6Q9Y5G7 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC27.88■■■□□ 2.05
PCDHGA6Q9Y5G7 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC27.84■■■□□ 2.05
PCDHGA6Q9Y5G7 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC27.83■■■□□ 2.05
PCDHGA6Q9Y5G7 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
PCDHGA6Q9Y5G7 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
PCDHGA6Q9Y5G7 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms