Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC37.15■■■■□ 3.54
UBQLN1Q9UMX0 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
UBQLN1Q9UMX0 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC36.02■■■■□ 3.36
UBQLN1Q9UMX0 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC36.02■■■■□ 3.36
UBQLN1Q9UMX0 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC35.98■■■■□ 3.35
UBQLN1Q9UMX0 AL356512.1-201ENST00000607453 1739 ntBASIC35.95■■■■□ 3.35
UBQLN1Q9UMX0 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.95■■■■□ 3.35
UBQLN1Q9UMX0 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC35.32■■■■□ 3.24
UBQLN1Q9UMX0 HES6-203ENST00000409160 1600 ntTSL 2 BASIC35.22■■■■□ 3.23
UBQLN1Q9UMX0 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC35.01■■■■□ 3.2
UBQLN1Q9UMX0 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC34.89■■■■□ 3.18
UBQLN1Q9UMX0 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC34.72■■■■□ 3.15
UBQLN1Q9UMX0 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC34.65■■■■□ 3.14
UBQLN1Q9UMX0 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC34.56■■■■□ 3.12
UBQLN1Q9UMX0 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC34.56■■■■□ 3.12
UBQLN1Q9UMX0 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
UBQLN1Q9UMX0 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC34.4■■■■□ 3.1
UBQLN1Q9UMX0 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC34.33■■■■□ 3.09
UBQLN1Q9UMX0 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC34.32■■■■□ 3.08
UBQLN1Q9UMX0 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC34.3■■■■□ 3.08
UBQLN1Q9UMX0 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC34.03■■■■□ 3.04
UBQLN1Q9UMX0 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC33.67■■■□□ 2.98
UBQLN1Q9UMX0 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC33.65■■■□□ 2.98
UBQLN1Q9UMX0 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
UBQLN1Q9UMX0 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC33.61■■■□□ 2.97
UBQLN1Q9UMX0 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.97
UBQLN1Q9UMX0 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
UBQLN1Q9UMX0 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC33.44■■■□□ 2.94
UBQLN1Q9UMX0 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC33.4■■■□□ 2.94
UBQLN1Q9UMX0 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC33.39■■■□□ 2.94
UBQLN1Q9UMX0 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
UBQLN1Q9UMX0 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC33.3■■■□□ 2.92
UBQLN1Q9UMX0 INO80B-203ENST00000409917 796 ntTSL 2 BASIC33.17■■■□□ 2.9
UBQLN1Q9UMX0 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC33.15■■■□□ 2.9
UBQLN1Q9UMX0 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC33.14■■■□□ 2.9
UBQLN1Q9UMX0 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.89
UBQLN1Q9UMX0 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC33.05■■■□□ 2.88
UBQLN1Q9UMX0 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC33■■■□□ 2.87
UBQLN1Q9UMX0 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
UBQLN1Q9UMX0 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
UBQLN1Q9UMX0 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
UBQLN1Q9UMX0 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC32.81■■■□□ 2.84
UBQLN1Q9UMX0 AC015813.7-201ENST00000623294 581 ntBASIC32.79■■■□□ 2.84
UBQLN1Q9UMX0 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.75■■■□□ 2.83
UBQLN1Q9UMX0 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC32.74■■■□□ 2.83
UBQLN1Q9UMX0 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32.73■■■□□ 2.83
UBQLN1Q9UMX0 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC32.66■■■□□ 2.82
UBQLN1Q9UMX0 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
UBQLN1Q9UMX0 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC32.58■■■□□ 2.81
UBQLN1Q9UMX0 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC32.57■■■□□ 2.8
UBQLN1Q9UMX0 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.52■■■□□ 2.8
UBQLN1Q9UMX0 AC006077.2-201ENST00000623591 457 ntBASIC32.47■■■□□ 2.79
UBQLN1Q9UMX0 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
UBQLN1Q9UMX0 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC32.42■■■□□ 2.78
UBQLN1Q9UMX0 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC32.37■■■□□ 2.77
UBQLN1Q9UMX0 ZNRF2P1-201ENST00000441407 443 ntBASIC32.35■■■□□ 2.77
UBQLN1Q9UMX0 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC32.3■■■□□ 2.76
UBQLN1Q9UMX0 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
UBQLN1Q9UMX0 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
UBQLN1Q9UMX0 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC32.21■■■□□ 2.75
UBQLN1Q9UMX0 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
UBQLN1Q9UMX0 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
UBQLN1Q9UMX0 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
UBQLN1Q9UMX0 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
UBQLN1Q9UMX0 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
UBQLN1Q9UMX0 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC32.01■■■□□ 2.72
UBQLN1Q9UMX0 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
UBQLN1Q9UMX0 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.95■■■□□ 2.71
UBQLN1Q9UMX0 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
UBQLN1Q9UMX0 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
UBQLN1Q9UMX0 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
UBQLN1Q9UMX0 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
UBQLN1Q9UMX0 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC31.74■■■□□ 2.67
UBQLN1Q9UMX0 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
UBQLN1Q9UMX0 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
UBQLN1Q9UMX0 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.65■■■□□ 2.66
UBQLN1Q9UMX0 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
UBQLN1Q9UMX0 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.62■■■□□ 2.65
UBQLN1Q9UMX0 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
UBQLN1Q9UMX0 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.58■■■□□ 2.65
UBQLN1Q9UMX0 AP002365.1-201ENST00000603448 772 ntBASIC31.57■■■□□ 2.64
UBQLN1Q9UMX0 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
UBQLN1Q9UMX0 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC31.56■■■□□ 2.64
UBQLN1Q9UMX0 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
UBQLN1Q9UMX0 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC31.55■■■□□ 2.64
UBQLN1Q9UMX0 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
UBQLN1Q9UMX0 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
UBQLN1Q9UMX0 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
UBQLN1Q9UMX0 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
UBQLN1Q9UMX0 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
UBQLN1Q9UMX0 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
UBQLN1Q9UMX0 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC31.42■■■□□ 2.62
UBQLN1Q9UMX0 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC31.42■■■□□ 2.62
UBQLN1Q9UMX0 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC31.38■■■□□ 2.61
UBQLN1Q9UMX0 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC31.35■■■□□ 2.61
UBQLN1Q9UMX0 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
UBQLN1Q9UMX0 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
UBQLN1Q9UMX0 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC31.33■■■□□ 2.61
UBQLN1Q9UMX0 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.32■■■□□ 2.6
UBQLN1Q9UMX0 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.29■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms