Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC31.82■■■□□ 2.68
CDCP1Q9H5V8 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CDCP1Q9H5V8 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC30.88■■■□□ 2.53
CDCP1Q9H5V8 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CDCP1Q9H5V8 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC30.82■■■□□ 2.52
CDCP1Q9H5V8 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CDCP1Q9H5V8 AL356512.1-201ENST00000607453 1739 ntBASIC30.73■■■□□ 2.51
CDCP1Q9H5V8 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC30.36■■■□□ 2.45
CDCP1Q9H5V8 HES6-203ENST00000409160 1600 ntTSL 2 BASIC29.98■■■□□ 2.39
CDCP1Q9H5V8 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC29.94■■■□□ 2.38
CDCP1Q9H5V8 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC29.75■■■□□ 2.35
CDCP1Q9H5V8 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC29.72■■■□□ 2.35
CDCP1Q9H5V8 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC29.7■■■□□ 2.35
CDCP1Q9H5V8 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC29.63■■■□□ 2.33
CDCP1Q9H5V8 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC29.56■■■□□ 2.32
CDCP1Q9H5V8 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC29.52■■■□□ 2.32
CDCP1Q9H5V8 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC29.49■■■□□ 2.31
CDCP1Q9H5V8 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
CDCP1Q9H5V8 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CDCP1Q9H5V8 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC29.19■■■□□ 2.26
CDCP1Q9H5V8 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
CDCP1Q9H5V8 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC29.11■■■□□ 2.25
CDCP1Q9H5V8 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC29.03■■■□□ 2.24
CDCP1Q9H5V8 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
CDCP1Q9H5V8 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CDCP1Q9H5V8 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CDCP1Q9H5V8 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
CDCP1Q9H5V8 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CDCP1Q9H5V8 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CDCP1Q9H5V8 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC28.65■■■□□ 2.18
CDCP1Q9H5V8 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
CDCP1Q9H5V8 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC28.55■■■□□ 2.16
CDCP1Q9H5V8 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
CDCP1Q9H5V8 INO80B-203ENST00000409917 796 ntTSL 2 BASIC28.54■■■□□ 2.16
CDCP1Q9H5V8 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC28.45■■■□□ 2.14
CDCP1Q9H5V8 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC28.4■■■□□ 2.14
CDCP1Q9H5V8 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CDCP1Q9H5V8 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CDCP1Q9H5V8 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
CDCP1Q9H5V8 AC015813.7-201ENST00000623294 581 ntBASIC28.17■■■□□ 2.1
CDCP1Q9H5V8 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC28.14■■■□□ 2.1
CDCP1Q9H5V8 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CDCP1Q9H5V8 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC28.1■■■□□ 2.09
CDCP1Q9H5V8 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
CDCP1Q9H5V8 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CDCP1Q9H5V8 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CDCP1Q9H5V8 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC28.02■■■□□ 2.08
CDCP1Q9H5V8 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC28.01■■■□□ 2.07
CDCP1Q9H5V8 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC28■■■□□ 2.07
CDCP1Q9H5V8 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC27.98■■■□□ 2.07
CDCP1Q9H5V8 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CDCP1Q9H5V8 AC006077.2-201ENST00000623591 457 ntBASIC27.93■■■□□ 2.06
CDCP1Q9H5V8 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC27.88■■■□□ 2.05
CDCP1Q9H5V8 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC27.86■■■□□ 2.05
CDCP1Q9H5V8 ZNRF2P1-201ENST00000441407 443 ntBASIC27.84■■■□□ 2.05
CDCP1Q9H5V8 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC27.83■■■□□ 2.05
CDCP1Q9H5V8 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC27.78■■■□□ 2.04
CDCP1Q9H5V8 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC27.77■■■□□ 2.04
CDCP1Q9H5V8 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
CDCP1Q9H5V8 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
CDCP1Q9H5V8 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
CDCP1Q9H5V8 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC27.68■■■□□ 2.02
CDCP1Q9H5V8 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CDCP1Q9H5V8 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC27.61■■■□□ 2.01
CDCP1Q9H5V8 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CDCP1Q9H5V8 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
CDCP1Q9H5V8 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CDCP1Q9H5V8 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
CDCP1Q9H5V8 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CDCP1Q9H5V8 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CDCP1Q9H5V8 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CDCP1Q9H5V8 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CDCP1Q9H5V8 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CDCP1Q9H5V8 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC27.25■■□□□ 1.95
CDCP1Q9H5V8 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CDCP1Q9H5V8 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC27.24■■□□□ 1.95
CDCP1Q9H5V8 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
CDCP1Q9H5V8 ILK-212ENST00000532063 1617 ntTSL 2 BASIC27.21■■□□□ 1.95
CDCP1Q9H5V8 AP002365.1-201ENST00000603448 772 ntBASIC27.18■■□□□ 1.94
CDCP1Q9H5V8 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CDCP1Q9H5V8 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC27.11■■□□□ 1.93
CDCP1Q9H5V8 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CDCP1Q9H5V8 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC27.1■■□□□ 1.93
CDCP1Q9H5V8 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC27.08■■□□□ 1.93
CDCP1Q9H5V8 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
CDCP1Q9H5V8 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CDCP1Q9H5V8 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC27.05■■□□□ 1.92
CDCP1Q9H5V8 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC27.04■■□□□ 1.92
CDCP1Q9H5V8 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CDCP1Q9H5V8 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC27.03■■□□□ 1.92
CDCP1Q9H5V8 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
CDCP1Q9H5V8 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CDCP1Q9H5V8 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
CDCP1Q9H5V8 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC27■■□□□ 1.91
CDCP1Q9H5V8 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
CDCP1Q9H5V8 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC26.96■■□□□ 1.91
CDCP1Q9H5V8 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CDCP1Q9H5V8 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CDCP1Q9H5V8 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDCP1Q9H5V8 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC26.9■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms