Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC33.87■■■■□ 3.01
CLPBQ9H078 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
CLPBQ9H078 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC33.08■■■□□ 2.89
CLPBQ9H078 AL356512.1-201ENST00000607453 1739 ntBASIC32.93■■■□□ 2.86
CLPBQ9H078 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
CLPBQ9H078 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC32.86■■■□□ 2.85
CLPBQ9H078 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
CLPBQ9H078 HES6-203ENST00000409160 1600 ntTSL 2 BASIC32.57■■■□□ 2.8
CLPBQ9H078 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.55■■■□□ 2.8
CLPBQ9H078 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.25■■■□□ 2.75
CLPBQ9H078 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC32.25■■■□□ 2.75
CLPBQ9H078 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC32.03■■■□□ 2.72
CLPBQ9H078 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC31.99■■■□□ 2.71
CLPBQ9H078 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.67
CLPBQ9H078 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC31.65■■■□□ 2.66
CLPBQ9H078 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC31.59■■■□□ 2.65
CLPBQ9H078 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC31.56■■■□□ 2.64
CLPBQ9H078 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.54■■■□□ 2.64
CLPBQ9H078 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CLPBQ9H078 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
CLPBQ9H078 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
CLPBQ9H078 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.2■■■□□ 2.59
CLPBQ9H078 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
CLPBQ9H078 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CLPBQ9H078 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
CLPBQ9H078 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC31.03■■■□□ 2.56
CLPBQ9H078 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CLPBQ9H078 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC30.94■■■□□ 2.54
CLPBQ9H078 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.82■■■□□ 2.53
CLPBQ9H078 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC30.79■■■□□ 2.52
CLPBQ9H078 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CLPBQ9H078 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CLPBQ9H078 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
CLPBQ9H078 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.64■■■□□ 2.5
CLPBQ9H078 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CLPBQ9H078 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CLPBQ9H078 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
CLPBQ9H078 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CLPBQ9H078 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CLPBQ9H078 INO80B-203ENST00000409917 796 ntTSL 2 BASIC30.55■■■□□ 2.48
CLPBQ9H078 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.49■■■□□ 2.47
CLPBQ9H078 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.38■■■□□ 2.45
CLPBQ9H078 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC30.31■■■□□ 2.44
CLPBQ9H078 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CLPBQ9H078 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CLPBQ9H078 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CLPBQ9H078 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC30.19■■■□□ 2.42
CLPBQ9H078 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC30.19■■■□□ 2.42
CLPBQ9H078 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CLPBQ9H078 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CLPBQ9H078 AC015813.7-201ENST00000623294 581 ntBASIC30.11■■■□□ 2.41
CLPBQ9H078 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC30.03■■■□□ 2.4
CLPBQ9H078 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC30■■■□□ 2.39
CLPBQ9H078 AC006077.2-201ENST00000623591 457 ntBASIC29.98■■■□□ 2.39
CLPBQ9H078 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
CLPBQ9H078 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC29.94■■■□□ 2.38
CLPBQ9H078 ZNRF2P1-201ENST00000441407 443 ntBASIC29.92■■■□□ 2.38
CLPBQ9H078 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC29.91■■■□□ 2.38
CLPBQ9H078 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CLPBQ9H078 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CLPBQ9H078 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC29.79■■■□□ 2.36
CLPBQ9H078 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC29.78■■■□□ 2.36
CLPBQ9H078 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC29.71■■■□□ 2.35
CLPBQ9H078 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
CLPBQ9H078 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
CLPBQ9H078 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC29.61■■■□□ 2.33
CLPBQ9H078 ILK-212ENST00000532063 1617 ntTSL 2 BASIC29.59■■■□□ 2.33
CLPBQ9H078 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
CLPBQ9H078 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
CLPBQ9H078 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CLPBQ9H078 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC29.44■■■□□ 2.3
CLPBQ9H078 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.43■■■□□ 2.3
CLPBQ9H078 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.38■■■□□ 2.29
CLPBQ9H078 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CLPBQ9H078 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CLPBQ9H078 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC29.33■■■□□ 2.29
CLPBQ9H078 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
CLPBQ9H078 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CLPBQ9H078 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.23■■■□□ 2.27
CLPBQ9H078 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CLPBQ9H078 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC29.21■■■□□ 2.27
CLPBQ9H078 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
CLPBQ9H078 AP002365.1-201ENST00000603448 772 ntBASIC29.19■■■□□ 2.26
CLPBQ9H078 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC29.19■■■□□ 2.26
CLPBQ9H078 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CLPBQ9H078 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
CLPBQ9H078 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CLPBQ9H078 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CLPBQ9H078 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC29.14■■■□□ 2.26
CLPBQ9H078 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
CLPBQ9H078 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
CLPBQ9H078 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC29.07■■■□□ 2.24
CLPBQ9H078 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CLPBQ9H078 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC29.06■■■□□ 2.24
CLPBQ9H078 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC29.06■■■□□ 2.24
CLPBQ9H078 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC28.99■■■□□ 2.23
CLPBQ9H078 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC28.97■■■□□ 2.23
CLPBQ9H078 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
CLPBQ9H078 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
CLPBQ9H078 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms