Protein–RNA interactions for Protein: Q9BZC7

ABCA2, ATP-binding cassette sub-family A member 2, humanhuman

Predictions only

Length 2,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2Q9BZC7 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
ABCA2Q9BZC7 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC28.47■■■□□ 2.15
ABCA2Q9BZC7 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC28.14■■■□□ 2.1
ABCA2Q9BZC7 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
ABCA2Q9BZC7 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
ABCA2Q9BZC7 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.02
ABCA2Q9BZC7 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
ABCA2Q9BZC7 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
ABCA2Q9BZC7 AL356512.1-201ENST00000607453 1739 ntBASIC27.49■■□□□ 1.99
ABCA2Q9BZC7 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
ABCA2Q9BZC7 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
ABCA2Q9BZC7 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
ABCA2Q9BZC7 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
ABCA2Q9BZC7 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC26.99■■□□□ 1.91
ABCA2Q9BZC7 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC26.94■■□□□ 1.9
ABCA2Q9BZC7 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC26.88■■□□□ 1.89
ABCA2Q9BZC7 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC26.85■■□□□ 1.89
ABCA2Q9BZC7 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
ABCA2Q9BZC7 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
ABCA2Q9BZC7 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
ABCA2Q9BZC7 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
ABCA2Q9BZC7 HES6-203ENST00000409160 1600 ntTSL 2 BASIC26.6■■□□□ 1.85
ABCA2Q9BZC7 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC26.43■■□□□ 1.82
ABCA2Q9BZC7 ZNRF2P1-201ENST00000441407 443 ntBASIC26.35■■□□□ 1.81
ABCA2Q9BZC7 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ABCA2Q9BZC7 AC006077.2-201ENST00000623591 457 ntBASIC26.28■■□□□ 1.8
ABCA2Q9BZC7 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
ABCA2Q9BZC7 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
ABCA2Q9BZC7 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC26.23■■□□□ 1.79
ABCA2Q9BZC7 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
ABCA2Q9BZC7 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ABCA2Q9BZC7 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ABCA2Q9BZC7 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC26.14■■□□□ 1.78
ABCA2Q9BZC7 INO80B-203ENST00000409917 796 ntTSL 2 BASIC26.04■■□□□ 1.76
ABCA2Q9BZC7 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
ABCA2Q9BZC7 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC25.92■■□□□ 1.74
ABCA2Q9BZC7 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
ABCA2Q9BZC7 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
ABCA2Q9BZC7 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ABCA2Q9BZC7 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC25.62■■□□□ 1.69
ABCA2Q9BZC7 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC25.59■■□□□ 1.69
ABCA2Q9BZC7 AP002365.1-201ENST00000603448 772 ntBASIC25.57■■□□□ 1.68
ABCA2Q9BZC7 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC25.56■■□□□ 1.68
ABCA2Q9BZC7 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
ABCA2Q9BZC7 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
ABCA2Q9BZC7 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
ABCA2Q9BZC7 AC015813.7-201ENST00000623294 581 ntBASIC25.49■■□□□ 1.67
ABCA2Q9BZC7 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC25.48■■□□□ 1.67
ABCA2Q9BZC7 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
ABCA2Q9BZC7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC25.44■■□□□ 1.66
ABCA2Q9BZC7 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC25.41■■□□□ 1.66
ABCA2Q9BZC7 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
ABCA2Q9BZC7 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC25.37■■□□□ 1.65
ABCA2Q9BZC7 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
ABCA2Q9BZC7 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
ABCA2Q9BZC7 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
ABCA2Q9BZC7 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC25.31■■□□□ 1.64
ABCA2Q9BZC7 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC25.31■■□□□ 1.64
ABCA2Q9BZC7 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ABCA2Q9BZC7 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
ABCA2Q9BZC7 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC25.2■■□□□ 1.62
ABCA2Q9BZC7 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ABCA2Q9BZC7 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ABCA2Q9BZC7 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
ABCA2Q9BZC7 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC25.09■■□□□ 1.61
ABCA2Q9BZC7 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC25.08■■□□□ 1.61
ABCA2Q9BZC7 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
ABCA2Q9BZC7 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC24.95■■□□□ 1.58
ABCA2Q9BZC7 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
ABCA2Q9BZC7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC24.92■■□□□ 1.58
ABCA2Q9BZC7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC24.91■■□□□ 1.58
ABCA2Q9BZC7 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC24.91■■□□□ 1.58
ABCA2Q9BZC7 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
ABCA2Q9BZC7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC24.87■■□□□ 1.57
ABCA2Q9BZC7 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC24.87■■□□□ 1.57
ABCA2Q9BZC7 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
ABCA2Q9BZC7 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC24.86■■□□□ 1.57
ABCA2Q9BZC7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC24.84■■□□□ 1.57
ABCA2Q9BZC7 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
ABCA2Q9BZC7 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
ABCA2Q9BZC7 RPS2P35-201ENST00000443417 897 ntBASIC24.81■■□□□ 1.56
ABCA2Q9BZC7 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
ABCA2Q9BZC7 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC24.81■■□□□ 1.56
ABCA2Q9BZC7 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
ABCA2Q9BZC7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
ABCA2Q9BZC7 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC24.79■■□□□ 1.56
ABCA2Q9BZC7 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
ABCA2Q9BZC7 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
ABCA2Q9BZC7 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
ABCA2Q9BZC7 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC24.73■■□□□ 1.55
ABCA2Q9BZC7 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
ABCA2Q9BZC7 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
ABCA2Q9BZC7 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC24.66■■□□□ 1.54
ABCA2Q9BZC7 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC24.66■■□□□ 1.54
ABCA2Q9BZC7 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC24.65■■□□□ 1.54
ABCA2Q9BZC7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
ABCA2Q9BZC7 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC24.64■■□□□ 1.53
ABCA2Q9BZC7 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.53
ABCA2Q9BZC7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC24.63■■□□□ 1.53
ABCA2Q9BZC7 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms