Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC32.95■■■□□ 2.87
SLC46A1Q96NT5 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC32.71■■■□□ 2.83
SLC46A1Q96NT5 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.26■■■□□ 2.75
SLC46A1Q96NT5 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
SLC46A1Q96NT5 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SLC46A1Q96NT5 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.65
SLC46A1Q96NT5 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SLC46A1Q96NT5 AL356512.1-201ENST00000607453 1739 ntBASIC31.36■■■□□ 2.61
SLC46A1Q96NT5 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
SLC46A1Q96NT5 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.17■■■□□ 2.58
SLC46A1Q96NT5 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
SLC46A1Q96NT5 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC30.98■■■□□ 2.55
SLC46A1Q96NT5 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC30.96■■■□□ 2.55
SLC46A1Q96NT5 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
SLC46A1Q96NT5 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC30.7■■■□□ 2.51
SLC46A1Q96NT5 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
SLC46A1Q96NT5 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC30.62■■■□□ 2.49
SLC46A1Q96NT5 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SLC46A1Q96NT5 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC30.6■■■□□ 2.49
SLC46A1Q96NT5 HES6-203ENST00000409160 1600 ntTSL 2 BASIC30.49■■■□□ 2.47
SLC46A1Q96NT5 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SLC46A1Q96NT5 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
SLC46A1Q96NT5 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
SLC46A1Q96NT5 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.26■■■□□ 2.43
SLC46A1Q96NT5 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC30.18■■■□□ 2.42
SLC46A1Q96NT5 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SLC46A1Q96NT5 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC30.14■■■□□ 2.41
SLC46A1Q96NT5 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SLC46A1Q96NT5 INO80B-203ENST00000409917 796 ntTSL 2 BASIC30.07■■■□□ 2.4
SLC46A1Q96NT5 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC30.02■■■□□ 2.4
SLC46A1Q96NT5 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC29.99■■■□□ 2.39
SLC46A1Q96NT5 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
SLC46A1Q96NT5 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC29.94■■■□□ 2.38
SLC46A1Q96NT5 AC006077.2-201ENST00000623591 457 ntBASIC29.83■■■□□ 2.37
SLC46A1Q96NT5 ZNRF2P1-201ENST00000441407 443 ntBASIC29.8■■■□□ 2.36
SLC46A1Q96NT5 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC29.72■■■□□ 2.35
SLC46A1Q96NT5 AC015813.7-201ENST00000623294 581 ntBASIC29.63■■■□□ 2.33
SLC46A1Q96NT5 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC29.61■■■□□ 2.33
SLC46A1Q96NT5 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
SLC46A1Q96NT5 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
SLC46A1Q96NT5 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
SLC46A1Q96NT5 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC29.3■■■□□ 2.28
SLC46A1Q96NT5 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC29.13■■■□□ 2.25
SLC46A1Q96NT5 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
SLC46A1Q96NT5 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
SLC46A1Q96NT5 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
SLC46A1Q96NT5 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
SLC46A1Q96NT5 AP002365.1-201ENST00000603448 772 ntBASIC29.04■■■□□ 2.24
SLC46A1Q96NT5 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
SLC46A1Q96NT5 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC28.96■■■□□ 2.23
SLC46A1Q96NT5 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
SLC46A1Q96NT5 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC28.87■■■□□ 2.21
SLC46A1Q96NT5 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC28.83■■■□□ 2.21
SLC46A1Q96NT5 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
SLC46A1Q96NT5 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC28.82■■■□□ 2.2
SLC46A1Q96NT5 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC28.81■■■□□ 2.2
SLC46A1Q96NT5 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
SLC46A1Q96NT5 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC28.79■■■□□ 2.2
SLC46A1Q96NT5 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC28.78■■■□□ 2.2
SLC46A1Q96NT5 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
SLC46A1Q96NT5 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
SLC46A1Q96NT5 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC28.7■■■□□ 2.18
SLC46A1Q96NT5 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC28.7■■■□□ 2.18
SLC46A1Q96NT5 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC28.69■■■□□ 2.18
SLC46A1Q96NT5 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC28.67■■■□□ 2.18
SLC46A1Q96NT5 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC28.65■■■□□ 2.18
SLC46A1Q96NT5 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC28.64■■■□□ 2.18
SLC46A1Q96NT5 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
SLC46A1Q96NT5 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC28.55■■■□□ 2.16
SLC46A1Q96NT5 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.16
SLC46A1Q96NT5 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC28.52■■■□□ 2.16
SLC46A1Q96NT5 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
SLC46A1Q96NT5 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC28.49■■■□□ 2.15
SLC46A1Q96NT5 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SLC46A1Q96NT5 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC28.46■■■□□ 2.15
SLC46A1Q96NT5 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SLC46A1Q96NT5 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC28.41■■■□□ 2.14
SLC46A1Q96NT5 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SLC46A1Q96NT5 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
SLC46A1Q96NT5 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
SLC46A1Q96NT5 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
SLC46A1Q96NT5 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SLC46A1Q96NT5 DYNLL1-208ENST00000550178 581 ntBASIC28.35■■■□□ 2.13
SLC46A1Q96NT5 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC28.34■■■□□ 2.13
SLC46A1Q96NT5 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SLC46A1Q96NT5 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SLC46A1Q96NT5 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC28.31■■■□□ 2.12
SLC46A1Q96NT5 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
SLC46A1Q96NT5 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
SLC46A1Q96NT5 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SLC46A1Q96NT5 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.25■■■□□ 2.11
SLC46A1Q96NT5 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC28.25■■■□□ 2.11
SLC46A1Q96NT5 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SLC46A1Q96NT5 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
SLC46A1Q96NT5 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC28.21■■■□□ 2.11
SLC46A1Q96NT5 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SLC46A1Q96NT5 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
SLC46A1Q96NT5 AL031258.1-201ENST00000623562 325 ntBASIC28.14■■■□□ 2.1
SLC46A1Q96NT5 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
SLC46A1Q96NT5 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC28.12■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms