Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC35.85■■■■□ 3.33
SH3RF2Q8TEC5 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC35.02■■■■□ 3.2
SH3RF2Q8TEC5 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
SH3RF2Q8TEC5 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
SH3RF2Q8TEC5 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
SH3RF2Q8TEC5 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC34.64■■■■□ 3.14
SH3RF2Q8TEC5 AL356512.1-201ENST00000607453 1739 ntBASIC34.5■■■■□ 3.11
SH3RF2Q8TEC5 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC34.44■■■■□ 3.1
SH3RF2Q8TEC5 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.62■■■□□ 2.97
SH3RF2Q8TEC5 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC33.62■■■□□ 2.97
SH3RF2Q8TEC5 HES6-203ENST00000409160 1600 ntTSL 2 BASIC33.53■■■□□ 2.96
SH3RF2Q8TEC5 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC33.5■■■□□ 2.95
SH3RF2Q8TEC5 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.46■■■□□ 2.95
SH3RF2Q8TEC5 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC33.42■■■□□ 2.94
SH3RF2Q8TEC5 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC33.41■■■□□ 2.94
SH3RF2Q8TEC5 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC33.28■■■□□ 2.92
SH3RF2Q8TEC5 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33.19■■■□□ 2.9
SH3RF2Q8TEC5 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC33.07■■■□□ 2.89
SH3RF2Q8TEC5 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC33■■■□□ 2.87
SH3RF2Q8TEC5 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
SH3RF2Q8TEC5 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
SH3RF2Q8TEC5 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC32.84■■■□□ 2.85
SH3RF2Q8TEC5 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
SH3RF2Q8TEC5 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
SH3RF2Q8TEC5 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
SH3RF2Q8TEC5 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.47■■■□□ 2.79
SH3RF2Q8TEC5 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.45■■■□□ 2.79
SH3RF2Q8TEC5 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
SH3RF2Q8TEC5 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
SH3RF2Q8TEC5 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.32■■■□□ 2.76
SH3RF2Q8TEC5 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
SH3RF2Q8TEC5 INO80B-203ENST00000409917 796 ntTSL 2 BASIC32.3■■■□□ 2.76
SH3RF2Q8TEC5 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
SH3RF2Q8TEC5 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
SH3RF2Q8TEC5 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC31.97■■■□□ 2.71
SH3RF2Q8TEC5 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
SH3RF2Q8TEC5 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
SH3RF2Q8TEC5 AC015813.7-201ENST00000623294 581 ntBASIC31.85■■■□□ 2.69
SH3RF2Q8TEC5 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SH3RF2Q8TEC5 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
SH3RF2Q8TEC5 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.78■■■□□ 2.68
SH3RF2Q8TEC5 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.72■■■□□ 2.67
SH3RF2Q8TEC5 AC006077.2-201ENST00000623591 457 ntBASIC31.71■■■□□ 2.67
SH3RF2Q8TEC5 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC31.69■■■□□ 2.66
SH3RF2Q8TEC5 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC31.67■■■□□ 2.66
SH3RF2Q8TEC5 ZNRF2P1-201ENST00000441407 443 ntBASIC31.65■■■□□ 2.66
SH3RF2Q8TEC5 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
SH3RF2Q8TEC5 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
SH3RF2Q8TEC5 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SH3RF2Q8TEC5 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
SH3RF2Q8TEC5 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.35■■■□□ 2.61
SH3RF2Q8TEC5 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.34■■■□□ 2.61
SH3RF2Q8TEC5 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.3■■■□□ 2.6
SH3RF2Q8TEC5 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.28■■■□□ 2.6
SH3RF2Q8TEC5 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
SH3RF2Q8TEC5 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
SH3RF2Q8TEC5 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SH3RF2Q8TEC5 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.16■■■□□ 2.58
SH3RF2Q8TEC5 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.09■■■□□ 2.57
SH3RF2Q8TEC5 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.03■■■□□ 2.56
SH3RF2Q8TEC5 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.55
SH3RF2Q8TEC5 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SH3RF2Q8TEC5 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SH3RF2Q8TEC5 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC30.93■■■□□ 2.54
SH3RF2Q8TEC5 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
SH3RF2Q8TEC5 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.89■■■□□ 2.54
SH3RF2Q8TEC5 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC30.89■■■□□ 2.53
SH3RF2Q8TEC5 AP002365.1-201ENST00000603448 772 ntBASIC30.88■■■□□ 2.53
SH3RF2Q8TEC5 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
SH3RF2Q8TEC5 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
SH3RF2Q8TEC5 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
SH3RF2Q8TEC5 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
SH3RF2Q8TEC5 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC30.73■■■□□ 2.51
SH3RF2Q8TEC5 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.73■■■□□ 2.51
SH3RF2Q8TEC5 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SH3RF2Q8TEC5 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.72■■■□□ 2.51
SH3RF2Q8TEC5 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.67■■■□□ 2.5
SH3RF2Q8TEC5 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.66■■■□□ 2.5
SH3RF2Q8TEC5 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SH3RF2Q8TEC5 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC30.62■■■□□ 2.49
SH3RF2Q8TEC5 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.62■■■□□ 2.49
SH3RF2Q8TEC5 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
SH3RF2Q8TEC5 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SH3RF2Q8TEC5 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.59■■■□□ 2.49
SH3RF2Q8TEC5 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
SH3RF2Q8TEC5 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
SH3RF2Q8TEC5 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SH3RF2Q8TEC5 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.51■■■□□ 2.47
SH3RF2Q8TEC5 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
SH3RF2Q8TEC5 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
SH3RF2Q8TEC5 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
SH3RF2Q8TEC5 DYNLL1-208ENST00000550178 581 ntBASIC30.46■■■□□ 2.47
SH3RF2Q8TEC5 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
SH3RF2Q8TEC5 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.45■■■□□ 2.47
SH3RF2Q8TEC5 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.43■■■□□ 2.46
SH3RF2Q8TEC5 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.41■■■□□ 2.46
SH3RF2Q8TEC5 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.4■■■□□ 2.46
SH3RF2Q8TEC5 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SH3RF2Q8TEC5 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC30.36■■■□□ 2.45
SH3RF2Q8TEC5 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms