Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC31.26■■■□□ 2.59
RP1L1Q8IWN7 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
RP1L1Q8IWN7 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC30.83■■■□□ 2.53
RP1L1Q8IWN7 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
RP1L1Q8IWN7 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
RP1L1Q8IWN7 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC29.9■■■□□ 2.38
RP1L1Q8IWN7 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC29.74■■■□□ 2.35
RP1L1Q8IWN7 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
RP1L1Q8IWN7 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
RP1L1Q8IWN7 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
RP1L1Q8IWN7 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC29.7■■■□□ 2.35
RP1L1Q8IWN7 AL356512.1-201ENST00000607453 1739 ntBASIC29.65■■■□□ 2.34
RP1L1Q8IWN7 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
RP1L1Q8IWN7 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC29.56■■■□□ 2.32
RP1L1Q8IWN7 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
RP1L1Q8IWN7 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC29.28■■■□□ 2.28
RP1L1Q8IWN7 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC29.13■■■□□ 2.25
RP1L1Q8IWN7 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC29.08■■■□□ 2.25
RP1L1Q8IWN7 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC28.98■■■□□ 2.23
RP1L1Q8IWN7 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC28.9■■■□□ 2.22
RP1L1Q8IWN7 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
RP1L1Q8IWN7 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
RP1L1Q8IWN7 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC28.77■■■□□ 2.2
RP1L1Q8IWN7 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
RP1L1Q8IWN7 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
RP1L1Q8IWN7 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
RP1L1Q8IWN7 AC006077.2-201ENST00000623591 457 ntBASIC28.64■■■□□ 2.17
RP1L1Q8IWN7 INO80B-203ENST00000409917 796 ntTSL 2 BASIC28.58■■■□□ 2.17
RP1L1Q8IWN7 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC28.5■■■□□ 2.15
RP1L1Q8IWN7 ZNRF2P1-201ENST00000441407 443 ntBASIC28.48■■■□□ 2.15
RP1L1Q8IWN7 HES6-203ENST00000409160 1600 ntTSL 2 BASIC28.42■■■□□ 2.14
RP1L1Q8IWN7 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC28.31■■■□□ 2.12
RP1L1Q8IWN7 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC28.3■■■□□ 2.12
RP1L1Q8IWN7 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC28.27■■■□□ 2.12
RP1L1Q8IWN7 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
RP1L1Q8IWN7 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
RP1L1Q8IWN7 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC28.16■■■□□ 2.1
RP1L1Q8IWN7 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
RP1L1Q8IWN7 AC015813.7-201ENST00000623294 581 ntBASIC28■■■□□ 2.07
RP1L1Q8IWN7 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
RP1L1Q8IWN7 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC27.83■■■□□ 2.05
RP1L1Q8IWN7 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
RP1L1Q8IWN7 AP002365.1-201ENST00000603448 772 ntBASIC27.78■■■□□ 2.04
RP1L1Q8IWN7 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC27.75■■■□□ 2.03
RP1L1Q8IWN7 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC27.72■■■□□ 2.03
RP1L1Q8IWN7 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC27.7■■■□□ 2.02
RP1L1Q8IWN7 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC27.61■■■□□ 2.01
RP1L1Q8IWN7 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
RP1L1Q8IWN7 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC27.58■■■□□ 2.01
RP1L1Q8IWN7 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
RP1L1Q8IWN7 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC27.52■■■□□ 2
RP1L1Q8IWN7 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
RP1L1Q8IWN7 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC27.45■■□□□ 1.98
RP1L1Q8IWN7 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
RP1L1Q8IWN7 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC27.43■■□□□ 1.98
RP1L1Q8IWN7 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC27.42■■□□□ 1.98
RP1L1Q8IWN7 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC27.39■■□□□ 1.97
RP1L1Q8IWN7 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC27.35■■□□□ 1.97
RP1L1Q8IWN7 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
RP1L1Q8IWN7 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC27.35■■□□□ 1.97
RP1L1Q8IWN7 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC27.33■■□□□ 1.97
RP1L1Q8IWN7 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC27.31■■□□□ 1.96
RP1L1Q8IWN7 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
RP1L1Q8IWN7 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
RP1L1Q8IWN7 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
RP1L1Q8IWN7 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RP1L1Q8IWN7 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
RP1L1Q8IWN7 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
RP1L1Q8IWN7 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
RP1L1Q8IWN7 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
RP1L1Q8IWN7 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RP1L1Q8IWN7 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC27.09■■□□□ 1.93
RP1L1Q8IWN7 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC27.08■■□□□ 1.93
RP1L1Q8IWN7 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC27.08■■□□□ 1.93
RP1L1Q8IWN7 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
RP1L1Q8IWN7 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RP1L1Q8IWN7 DYNLL1-208ENST00000550178 581 ntBASIC27.02■■□□□ 1.92
RP1L1Q8IWN7 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RP1L1Q8IWN7 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
RP1L1Q8IWN7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC26.97■■□□□ 1.91
RP1L1Q8IWN7 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RP1L1Q8IWN7 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RP1L1Q8IWN7 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RP1L1Q8IWN7 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.89■■□□□ 1.89
RP1L1Q8IWN7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC26.87■■□□□ 1.89
RP1L1Q8IWN7 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RP1L1Q8IWN7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.87■■□□□ 1.89
RP1L1Q8IWN7 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RP1L1Q8IWN7 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
RP1L1Q8IWN7 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC26.81■■□□□ 1.88
RP1L1Q8IWN7 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
RP1L1Q8IWN7 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.77■■□□□ 1.88
RP1L1Q8IWN7 RARRES2P7-201ENST00000567349 469 ntBASIC26.77■■□□□ 1.88
RP1L1Q8IWN7 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RP1L1Q8IWN7 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RP1L1Q8IWN7 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
RP1L1Q8IWN7 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RP1L1Q8IWN7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.67■■□□□ 1.86
RP1L1Q8IWN7 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
RP1L1Q8IWN7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms