Protein–RNA interactions for Protein: Q8IVN8

SBSPON, Somatomedin-B and thrombospondin type-1 domain-containing protein, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBSPONQ8IVN8 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
SBSPONQ8IVN8 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC25.04■■□□□ 1.6
SBSPONQ8IVN8 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC24.7■■□□□ 1.54
SBSPONQ8IVN8 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SBSPONQ8IVN8 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SBSPONQ8IVN8 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
SBSPONQ8IVN8 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SBSPONQ8IVN8 AL356512.1-201ENST00000607453 1739 ntBASIC24.15■■□□□ 1.46
SBSPONQ8IVN8 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
SBSPONQ8IVN8 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC23.91■■□□□ 1.42
SBSPONQ8IVN8 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SBSPONQ8IVN8 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC23.78■■□□□ 1.4
SBSPONQ8IVN8 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC23.77■■□□□ 1.4
SBSPONQ8IVN8 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SBSPONQ8IVN8 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
SBSPONQ8IVN8 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
SBSPONQ8IVN8 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
SBSPONQ8IVN8 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SBSPONQ8IVN8 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SBSPONQ8IVN8 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SBSPONQ8IVN8 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SBSPONQ8IVN8 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
SBSPONQ8IVN8 HES6-203ENST00000409160 1600 ntTSL 2 BASIC23.25■■□□□ 1.31
SBSPONQ8IVN8 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC23.22■■□□□ 1.31
SBSPONQ8IVN8 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
SBSPONQ8IVN8 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
SBSPONQ8IVN8 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SBSPONQ8IVN8 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC23.09■■□□□ 1.29
SBSPONQ8IVN8 INO80B-203ENST00000409917 796 ntTSL 2 BASIC23.08■■□□□ 1.29
SBSPONQ8IVN8 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SBSPONQ8IVN8 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SBSPONQ8IVN8 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC23.03■■□□□ 1.28
SBSPONQ8IVN8 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC23■■□□□ 1.27
SBSPONQ8IVN8 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
SBSPONQ8IVN8 AC006077.2-201ENST00000623591 457 ntBASIC22.81■■□□□ 1.24
SBSPONQ8IVN8 ZNRF2P1-201ENST00000441407 443 ntBASIC22.8■■□□□ 1.24
SBSPONQ8IVN8 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC22.79■■□□□ 1.24
SBSPONQ8IVN8 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
SBSPONQ8IVN8 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SBSPONQ8IVN8 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC22.71■■□□□ 1.23
SBSPONQ8IVN8 AC015813.7-201ENST00000623294 581 ntBASIC22.71■■□□□ 1.23
SBSPONQ8IVN8 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SBSPONQ8IVN8 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SBSPONQ8IVN8 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC22.54■■□□□ 1.2
SBSPONQ8IVN8 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SBSPONQ8IVN8 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SBSPONQ8IVN8 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SBSPONQ8IVN8 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SBSPONQ8IVN8 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
SBSPONQ8IVN8 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SBSPONQ8IVN8 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SBSPONQ8IVN8 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC22.26■■□□□ 1.15
SBSPONQ8IVN8 AP002365.1-201ENST00000603448 772 ntBASIC22.24■■□□□ 1.15
SBSPONQ8IVN8 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SBSPONQ8IVN8 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SBSPONQ8IVN8 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SBSPONQ8IVN8 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC22.09■■□□□ 1.13
SBSPONQ8IVN8 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC22.09■■□□□ 1.13
SBSPONQ8IVN8 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SBSPONQ8IVN8 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC22.08■■□□□ 1.13
SBSPONQ8IVN8 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.13
SBSPONQ8IVN8 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC22.07■■□□□ 1.12
SBSPONQ8IVN8 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC22.06■■□□□ 1.12
SBSPONQ8IVN8 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
SBSPONQ8IVN8 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SBSPONQ8IVN8 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SBSPONQ8IVN8 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC22.03■■□□□ 1.12
SBSPONQ8IVN8 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC22■■□□□ 1.11
SBSPONQ8IVN8 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
SBSPONQ8IVN8 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SBSPONQ8IVN8 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC21.95■■□□□ 1.1
SBSPONQ8IVN8 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC21.95■■□□□ 1.1
SBSPONQ8IVN8 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SBSPONQ8IVN8 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SBSPONQ8IVN8 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SBSPONQ8IVN8 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
SBSPONQ8IVN8 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC21.88■■□□□ 1.09
SBSPONQ8IVN8 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
SBSPONQ8IVN8 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SBSPONQ8IVN8 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SBSPONQ8IVN8 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
SBSPONQ8IVN8 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC21.82■■□□□ 1.08
SBSPONQ8IVN8 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SBSPONQ8IVN8 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC21.8■■□□□ 1.08
SBSPONQ8IVN8 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SBSPONQ8IVN8 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SBSPONQ8IVN8 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SBSPONQ8IVN8 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SBSPONQ8IVN8 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SBSPONQ8IVN8 DYNLL1-208ENST00000550178 581 ntBASIC21.76■■□□□ 1.07
SBSPONQ8IVN8 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC21.74■■□□□ 1.07
SBSPONQ8IVN8 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
SBSPONQ8IVN8 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SBSPONQ8IVN8 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SBSPONQ8IVN8 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SBSPONQ8IVN8 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SBSPONQ8IVN8 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SBSPONQ8IVN8 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC21.66■■□□□ 1.06
SBSPONQ8IVN8 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC21.63■■□□□ 1.05
SBSPONQ8IVN8 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms