Protein–RNA interactions for Protein: Q6XYD6

BRD3OS, BRD3 opposite strand, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3OSQ6XYD6 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC28■■■□□ 2.07
BRD3OSQ6XYD6 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC27.27■■□□□ 1.96
BRD3OSQ6XYD6 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
BRD3OSQ6XYD6 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
BRD3OSQ6XYD6 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
BRD3OSQ6XYD6 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
BRD3OSQ6XYD6 AL356512.1-201ENST00000607453 1739 ntBASIC26.99■■□□□ 1.91
BRD3OSQ6XYD6 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC26.83■■□□□ 1.89
BRD3OSQ6XYD6 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC26.33■■□□□ 1.81
BRD3OSQ6XYD6 HES6-203ENST00000409160 1600 ntTSL 2 BASIC26.25■■□□□ 1.79
BRD3OSQ6XYD6 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
BRD3OSQ6XYD6 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
BRD3OSQ6XYD6 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC26.14■■□□□ 1.78
BRD3OSQ6XYD6 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC26.09■■□□□ 1.77
BRD3OSQ6XYD6 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC26.08■■□□□ 1.77
BRD3OSQ6XYD6 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC26.05■■□□□ 1.76
BRD3OSQ6XYD6 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
BRD3OSQ6XYD6 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC25.91■■□□□ 1.74
BRD3OSQ6XYD6 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
BRD3OSQ6XYD6 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
BRD3OSQ6XYD6 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
BRD3OSQ6XYD6 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
BRD3OSQ6XYD6 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
BRD3OSQ6XYD6 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC25.49■■□□□ 1.67
BRD3OSQ6XYD6 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
BRD3OSQ6XYD6 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
BRD3OSQ6XYD6 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC25.33■■□□□ 1.65
BRD3OSQ6XYD6 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
BRD3OSQ6XYD6 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
BRD3OSQ6XYD6 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
BRD3OSQ6XYD6 INO80B-203ENST00000409917 796 ntTSL 2 BASIC25.21■■□□□ 1.63
BRD3OSQ6XYD6 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
BRD3OSQ6XYD6 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
BRD3OSQ6XYD6 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
BRD3OSQ6XYD6 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC25■■□□□ 1.59
BRD3OSQ6XYD6 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
BRD3OSQ6XYD6 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
BRD3OSQ6XYD6 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
BRD3OSQ6XYD6 AC015813.7-201ENST00000623294 581 ntBASIC24.83■■□□□ 1.57
BRD3OSQ6XYD6 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC24.79■■□□□ 1.56
BRD3OSQ6XYD6 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC24.77■■□□□ 1.56
BRD3OSQ6XYD6 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
BRD3OSQ6XYD6 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
BRD3OSQ6XYD6 AC006077.2-201ENST00000623591 457 ntBASIC24.69■■□□□ 1.54
BRD3OSQ6XYD6 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
BRD3OSQ6XYD6 ZNRF2P1-201ENST00000441407 443 ntBASIC24.64■■□□□ 1.54
BRD3OSQ6XYD6 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
BRD3OSQ6XYD6 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC24.6■■□□□ 1.53
BRD3OSQ6XYD6 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC24.6■■□□□ 1.53
BRD3OSQ6XYD6 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
BRD3OSQ6XYD6 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC24.57■■□□□ 1.52
BRD3OSQ6XYD6 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC24.51■■□□□ 1.51
BRD3OSQ6XYD6 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
BRD3OSQ6XYD6 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
BRD3OSQ6XYD6 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
BRD3OSQ6XYD6 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC24.39■■□□□ 1.5
BRD3OSQ6XYD6 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
BRD3OSQ6XYD6 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
BRD3OSQ6XYD6 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
BRD3OSQ6XYD6 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
BRD3OSQ6XYD6 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC24.25■■□□□ 1.47
BRD3OSQ6XYD6 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
BRD3OSQ6XYD6 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
BRD3OSQ6XYD6 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
BRD3OSQ6XYD6 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
BRD3OSQ6XYD6 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
BRD3OSQ6XYD6 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
BRD3OSQ6XYD6 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
BRD3OSQ6XYD6 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC24.07■■□□□ 1.44
BRD3OSQ6XYD6 AP002365.1-201ENST00000603448 772 ntBASIC24.07■■□□□ 1.44
BRD3OSQ6XYD6 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
BRD3OSQ6XYD6 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
BRD3OSQ6XYD6 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
BRD3OSQ6XYD6 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
BRD3OSQ6XYD6 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC23.94■■□□□ 1.42
BRD3OSQ6XYD6 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC23.94■■□□□ 1.42
BRD3OSQ6XYD6 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
BRD3OSQ6XYD6 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC23.92■■□□□ 1.42
BRD3OSQ6XYD6 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC23.9■■□□□ 1.42
BRD3OSQ6XYD6 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC23.89■■□□□ 1.41
BRD3OSQ6XYD6 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC23.89■■□□□ 1.41
BRD3OSQ6XYD6 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
BRD3OSQ6XYD6 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
BRD3OSQ6XYD6 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
BRD3OSQ6XYD6 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
BRD3OSQ6XYD6 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
BRD3OSQ6XYD6 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
BRD3OSQ6XYD6 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC23.8■■□□□ 1.4
BRD3OSQ6XYD6 ILK-212ENST00000532063 1617 ntTSL 2 BASIC23.8■■□□□ 1.4
BRD3OSQ6XYD6 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BRD3OSQ6XYD6 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC23.77■■□□□ 1.4
BRD3OSQ6XYD6 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
BRD3OSQ6XYD6 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
BRD3OSQ6XYD6 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
BRD3OSQ6XYD6 DYNLL1-208ENST00000550178 581 ntBASIC23.76■■□□□ 1.39
BRD3OSQ6XYD6 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
BRD3OSQ6XYD6 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
BRD3OSQ6XYD6 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
BRD3OSQ6XYD6 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
BRD3OSQ6XYD6 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms