Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC35.32■■■■□ 3.24
FOXR1Q6PIV2 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC34.33■■■■□ 3.09
FOXR1Q6PIV2 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
FOXR1Q6PIV2 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC33.84■■■■□ 3.01
FOXR1Q6PIV2 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
FOXR1Q6PIV2 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC33.14■■■□□ 2.9
FOXR1Q6PIV2 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC33.1■■■□□ 2.89
FOXR1Q6PIV2 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC33.02■■■□□ 2.88
FOXR1Q6PIV2 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
FOXR1Q6PIV2 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
FOXR1Q6PIV2 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC32.6■■■□□ 2.81
FOXR1Q6PIV2 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC32.57■■■□□ 2.8
FOXR1Q6PIV2 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
FOXR1Q6PIV2 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
FOXR1Q6PIV2 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.17■■■□□ 2.74
FOXR1Q6PIV2 HES6-203ENST00000409160 1600 ntTSL 2 BASIC32.16■■■□□ 2.74
FOXR1Q6PIV2 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC32.15■■■□□ 2.74
FOXR1Q6PIV2 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
FOXR1Q6PIV2 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
FOXR1Q6PIV2 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC32.08■■■□□ 2.73
FOXR1Q6PIV2 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
FOXR1Q6PIV2 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.98■■■□□ 2.71
FOXR1Q6PIV2 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
FOXR1Q6PIV2 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC31.94■■■□□ 2.7
FOXR1Q6PIV2 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.92■■■□□ 2.7
FOXR1Q6PIV2 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC31.79■■■□□ 2.68
FOXR1Q6PIV2 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
FOXR1Q6PIV2 AL356512.1-201ENST00000607453 1739 ntBASIC31.53■■■□□ 2.64
FOXR1Q6PIV2 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
FOXR1Q6PIV2 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC31.44■■■□□ 2.62
FOXR1Q6PIV2 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
FOXR1Q6PIV2 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
FOXR1Q6PIV2 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC31.33■■■□□ 2.61
FOXR1Q6PIV2 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
FOXR1Q6PIV2 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
FOXR1Q6PIV2 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
FOXR1Q6PIV2 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.23■■■□□ 2.59
FOXR1Q6PIV2 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC31.18■■■□□ 2.58
FOXR1Q6PIV2 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
FOXR1Q6PIV2 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
FOXR1Q6PIV2 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
FOXR1Q6PIV2 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
FOXR1Q6PIV2 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.05■■■□□ 2.56
FOXR1Q6PIV2 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
FOXR1Q6PIV2 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC31.04■■■□□ 2.56
FOXR1Q6PIV2 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC31.03■■■□□ 2.56
FOXR1Q6PIV2 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC31.01■■■□□ 2.55
FOXR1Q6PIV2 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
FOXR1Q6PIV2 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
FOXR1Q6PIV2 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.91■■■□□ 2.54
FOXR1Q6PIV2 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
FOXR1Q6PIV2 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.85■■■□□ 2.53
FOXR1Q6PIV2 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC30.83■■■□□ 2.53
FOXR1Q6PIV2 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC30.82■■■□□ 2.52
FOXR1Q6PIV2 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.77■■■□□ 2.52
FOXR1Q6PIV2 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
FOXR1Q6PIV2 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
FOXR1Q6PIV2 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.5
FOXR1Q6PIV2 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.69■■■□□ 2.5
FOXR1Q6PIV2 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
FOXR1Q6PIV2 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
FOXR1Q6PIV2 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
FOXR1Q6PIV2 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.57■■■□□ 2.48
FOXR1Q6PIV2 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.57■■■□□ 2.48
FOXR1Q6PIV2 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
FOXR1Q6PIV2 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
FOXR1Q6PIV2 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.55■■■□□ 2.48
FOXR1Q6PIV2 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.51■■■□□ 2.48
FOXR1Q6PIV2 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
FOXR1Q6PIV2 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
FOXR1Q6PIV2 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
FOXR1Q6PIV2 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
FOXR1Q6PIV2 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.39■■■□□ 2.46
FOXR1Q6PIV2 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
FOXR1Q6PIV2 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
FOXR1Q6PIV2 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
FOXR1Q6PIV2 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC30.36■■■□□ 2.45
FOXR1Q6PIV2 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
FOXR1Q6PIV2 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.33■■■□□ 2.45
FOXR1Q6PIV2 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
FOXR1Q6PIV2 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
FOXR1Q6PIV2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC30.24■■■□□ 2.43
FOXR1Q6PIV2 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
FOXR1Q6PIV2 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
FOXR1Q6PIV2 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.16■■■□□ 2.42
FOXR1Q6PIV2 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC30.15■■■□□ 2.42
FOXR1Q6PIV2 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
FOXR1Q6PIV2 INO80B-203ENST00000409917 796 ntTSL 2 BASIC30.12■■■□□ 2.41
FOXR1Q6PIV2 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC30.08■■■□□ 2.41
FOXR1Q6PIV2 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
FOXR1Q6PIV2 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.06■■■□□ 2.4
FOXR1Q6PIV2 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC30.05■■■□□ 2.4
FOXR1Q6PIV2 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
FOXR1Q6PIV2 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
FOXR1Q6PIV2 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
FOXR1Q6PIV2 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
FOXR1Q6PIV2 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
FOXR1Q6PIV2 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC29.94■■■□□ 2.38
FOXR1Q6PIV2 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC29.91■■■□□ 2.38
FOXR1Q6PIV2 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC29.91■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms