Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.03■■■■□ 3.36
SNX30Q5VWJ9 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
SNX30Q5VWJ9 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC35.01■■■■□ 3.2
SNX30Q5VWJ9 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
SNX30Q5VWJ9 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC34.87■■■■□ 3.17
SNX30Q5VWJ9 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
SNX30Q5VWJ9 AL356512.1-201ENST00000607453 1739 ntBASIC34.79■■■■□ 3.16
SNX30Q5VWJ9 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC34.38■■■■□ 3.09
SNX30Q5VWJ9 HES6-203ENST00000409160 1600 ntTSL 2 BASIC34.04■■■■□ 3.04
SNX30Q5VWJ9 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.87■■■■□ 3.01
SNX30Q5VWJ9 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC33.73■■■□□ 2.99
SNX30Q5VWJ9 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.63■■■□□ 2.97
SNX30Q5VWJ9 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC33.59■■■□□ 2.97
SNX30Q5VWJ9 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC33.57■■■□□ 2.96
SNX30Q5VWJ9 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC33.46■■■□□ 2.95
SNX30Q5VWJ9 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC33.4■■■□□ 2.94
SNX30Q5VWJ9 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC33.32■■■□□ 2.92
SNX30Q5VWJ9 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
SNX30Q5VWJ9 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33.26■■■□□ 2.92
SNX30Q5VWJ9 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC33.06■■■□□ 2.88
SNX30Q5VWJ9 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC33.02■■■□□ 2.88
SNX30Q5VWJ9 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33■■■□□ 2.87
SNX30Q5VWJ9 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
SNX30Q5VWJ9 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC32.75■■■□□ 2.83
SNX30Q5VWJ9 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
SNX30Q5VWJ9 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
SNX30Q5VWJ9 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC32.5■■■□□ 2.79
SNX30Q5VWJ9 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
SNX30Q5VWJ9 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
SNX30Q5VWJ9 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
SNX30Q5VWJ9 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.34■■■□□ 2.77
SNX30Q5VWJ9 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
SNX30Q5VWJ9 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.3■■■□□ 2.76
SNX30Q5VWJ9 INO80B-203ENST00000409917 796 ntTSL 2 BASIC32.23■■■□□ 2.75
SNX30Q5VWJ9 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.19■■■□□ 2.74
SNX30Q5VWJ9 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
SNX30Q5VWJ9 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.11■■■□□ 2.73
SNX30Q5VWJ9 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
SNX30Q5VWJ9 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC32.02■■■□□ 2.72
SNX30Q5VWJ9 AC015813.7-201ENST00000623294 581 ntBASIC31.9■■■□□ 2.7
SNX30Q5VWJ9 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
SNX30Q5VWJ9 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
SNX30Q5VWJ9 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.82■■■□□ 2.69
SNX30Q5VWJ9 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.82■■■□□ 2.68
SNX30Q5VWJ9 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
SNX30Q5VWJ9 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.78■■■□□ 2.68
SNX30Q5VWJ9 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
SNX30Q5VWJ9 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
SNX30Q5VWJ9 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.65■■■□□ 2.66
SNX30Q5VWJ9 AC006077.2-201ENST00000623591 457 ntBASIC31.65■■■□□ 2.66
SNX30Q5VWJ9 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.63■■■□□ 2.65
SNX30Q5VWJ9 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.62■■■□□ 2.65
SNX30Q5VWJ9 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.6■■■□□ 2.65
SNX30Q5VWJ9 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
SNX30Q5VWJ9 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.57■■■□□ 2.64
SNX30Q5VWJ9 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
SNX30Q5VWJ9 ZNRF2P1-201ENST00000441407 443 ntBASIC31.52■■■□□ 2.64
SNX30Q5VWJ9 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
SNX30Q5VWJ9 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
SNX30Q5VWJ9 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.39■■■□□ 2.62
SNX30Q5VWJ9 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
SNX30Q5VWJ9 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
SNX30Q5VWJ9 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.24■■■□□ 2.59
SNX30Q5VWJ9 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
SNX30Q5VWJ9 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SNX30Q5VWJ9 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC31.11■■■□□ 2.57
SNX30Q5VWJ9 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SNX30Q5VWJ9 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SNX30Q5VWJ9 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
SNX30Q5VWJ9 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
SNX30Q5VWJ9 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC30.99■■■□□ 2.55
SNX30Q5VWJ9 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.98■■■□□ 2.55
SNX30Q5VWJ9 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
SNX30Q5VWJ9 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
SNX30Q5VWJ9 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
SNX30Q5VWJ9 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.87■■■□□ 2.53
SNX30Q5VWJ9 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.86■■■□□ 2.53
SNX30Q5VWJ9 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
SNX30Q5VWJ9 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
SNX30Q5VWJ9 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
SNX30Q5VWJ9 AP002365.1-201ENST00000603448 772 ntBASIC30.73■■■□□ 2.51
SNX30Q5VWJ9 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.72■■■□□ 2.51
SNX30Q5VWJ9 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC30.71■■■□□ 2.51
SNX30Q5VWJ9 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
SNX30Q5VWJ9 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SNX30Q5VWJ9 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.68■■■□□ 2.5
SNX30Q5VWJ9 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SNX30Q5VWJ9 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.5
SNX30Q5VWJ9 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SNX30Q5VWJ9 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
SNX30Q5VWJ9 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SNX30Q5VWJ9 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.6■■■□□ 2.49
SNX30Q5VWJ9 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC30.6■■■□□ 2.49
SNX30Q5VWJ9 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
SNX30Q5VWJ9 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.5■■■□□ 2.47
SNX30Q5VWJ9 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
SNX30Q5VWJ9 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
SNX30Q5VWJ9 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.43■■■□□ 2.46
SNX30Q5VWJ9 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.42■■■□□ 2.46
SNX30Q5VWJ9 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.4■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms