Protein–RNA interactions for Protein: P55774

CCL18, C-C motif chemokine 18, humanhuman

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL18P55774 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
CCL18P55774 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCL18P55774 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC23.06■■□□□ 1.28
CCL18P55774 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCL18P55774 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
CCL18P55774 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CCL18P55774 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
CCL18P55774 AL356512.1-201ENST00000607453 1739 ntBASIC22.87■■□□□ 1.25
CCL18P55774 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
CCL18P55774 HES6-203ENST00000409160 1600 ntTSL 2 BASIC22.36■■□□□ 1.17
CCL18P55774 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCL18P55774 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
CCL18P55774 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
CCL18P55774 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CCL18P55774 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC22.09■■□□□ 1.13
CCL18P55774 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC22.06■■□□□ 1.12
CCL18P55774 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC22.04■■□□□ 1.12
CCL18P55774 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC22.03■■□□□ 1.12
CCL18P55774 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC22.03■■□□□ 1.12
CCL18P55774 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC21.98■■□□□ 1.11
CCL18P55774 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCL18P55774 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCL18P55774 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCL18P55774 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
CCL18P55774 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCL18P55774 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCL18P55774 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCL18P55774 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CCL18P55774 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCL18P55774 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCL18P55774 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CCL18P55774 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCL18P55774 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC21.39■■□□□ 1.01
CCL18P55774 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCL18P55774 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCL18P55774 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CCL18P55774 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCL18P55774 INO80B-203ENST00000409917 796 ntTSL 2 BASIC21.19■□□□□ 0.98
CCL18P55774 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCL18P55774 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC21.15■□□□□ 0.98
CCL18P55774 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC21.11■□□□□ 0.97
CCL18P55774 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCL18P55774 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCL18P55774 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCL18P55774 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCL18P55774 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCL18P55774 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
CCL18P55774 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC20.96■□□□□ 0.95
CCL18P55774 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC20.96■□□□□ 0.95
CCL18P55774 AC015813.7-201ENST00000623294 581 ntBASIC20.96■□□□□ 0.95
CCL18P55774 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCL18P55774 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCL18P55774 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCL18P55774 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCL18P55774 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
CCL18P55774 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC20.89■□□□□ 0.93
CCL18P55774 AC006077.2-201ENST00000623591 457 ntBASIC20.86■□□□□ 0.93
CCL18P55774 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CCL18P55774 ZNRF2P1-201ENST00000441407 443 ntBASIC20.78■□□□□ 0.92
CCL18P55774 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
CCL18P55774 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC20.73■□□□□ 0.91
CCL18P55774 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CCL18P55774 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCL18P55774 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCL18P55774 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC20.7■□□□□ 0.9
CCL18P55774 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CCL18P55774 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CCL18P55774 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCL18P55774 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCL18P55774 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCL18P55774 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCL18P55774 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCL18P55774 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CCL18P55774 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC20.47■□□□□ 0.87
CCL18P55774 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCL18P55774 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCL18P55774 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCL18P55774 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCL18P55774 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCL18P55774 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCL18P55774 ILK-212ENST00000532063 1617 ntTSL 2 BASIC20.35■□□□□ 0.85
CCL18P55774 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC20.3■□□□□ 0.84
CCL18P55774 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCL18P55774 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCL18P55774 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC20.27■□□□□ 0.84
CCL18P55774 AP002365.1-201ENST00000603448 772 ntBASIC20.27■□□□□ 0.84
CCL18P55774 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCL18P55774 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCL18P55774 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC20.22■□□□□ 0.83
CCL18P55774 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCL18P55774 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCL18P55774 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC20.19■□□□□ 0.82
CCL18P55774 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CCL18P55774 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCL18P55774 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CCL18P55774 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCL18P55774 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC20.12■□□□□ 0.81
CCL18P55774 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC20.12■□□□□ 0.81
CCL18P55774 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCL18P55774 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms