Protein–RNA interactions for Protein: P47895

ALDH1A3, Aldehyde dehydrogenase family 1 member A3, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3P47895 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.39■■■■□ 3.42
ALDH1A3P47895 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC35.56■■■■□ 3.28
ALDH1A3P47895 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
ALDH1A3P47895 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
ALDH1A3P47895 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
ALDH1A3P47895 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC35.18■■■■□ 3.22
ALDH1A3P47895 AL356512.1-201ENST00000607453 1739 ntBASIC35.03■■■■□ 3.2
ALDH1A3P47895 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC34.96■■■■□ 3.19
ALDH1A3P47895 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC34.16■■■■□ 3.06
ALDH1A3P47895 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC34.15■■■■□ 3.06
ALDH1A3P47895 HES6-203ENST00000409160 1600 ntTSL 2 BASIC34.09■■■■□ 3.05
ALDH1A3P47895 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC34■■■■□ 3.03
ALDH1A3P47895 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC33.98■■■■□ 3.03
ALDH1A3P47895 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC33.95■■■■□ 3.03
ALDH1A3P47895 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC33.89■■■■□ 3.02
ALDH1A3P47895 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC33.79■■■■□ 3
ALDH1A3P47895 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33.68■■■□□ 2.98
ALDH1A3P47895 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC33.62■■■□□ 2.97
ALDH1A3P47895 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC33.49■■■□□ 2.95
ALDH1A3P47895 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
ALDH1A3P47895 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC33.44■■■□□ 2.94
ALDH1A3P47895 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.32■■■□□ 2.92
ALDH1A3P47895 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
ALDH1A3P47895 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
ALDH1A3P47895 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
ALDH1A3P47895 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.96■■■□□ 2.87
ALDH1A3P47895 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.95■■■□□ 2.87
ALDH1A3P47895 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
ALDH1A3P47895 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.91■■■□□ 2.86
ALDH1A3P47895 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
ALDH1A3P47895 INO80B-203ENST00000409917 796 ntTSL 2 BASIC32.76■■■□□ 2.83
ALDH1A3P47895 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
ALDH1A3P47895 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC32.52■■■□□ 2.8
ALDH1A3P47895 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
ALDH1A3P47895 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.44■■■□□ 2.78
ALDH1A3P47895 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
ALDH1A3P47895 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.39■■■□□ 2.78
ALDH1A3P47895 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.37■■■□□ 2.77
ALDH1A3P47895 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
ALDH1A3P47895 AC015813.7-201ENST00000623294 581 ntBASIC32.33■■■□□ 2.77
ALDH1A3P47895 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC32.25■■■□□ 2.75
ALDH1A3P47895 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC32.25■■■□□ 2.75
ALDH1A3P47895 AC006077.2-201ENST00000623591 457 ntBASIC32.22■■■□□ 2.75
ALDH1A3P47895 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
ALDH1A3P47895 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC32.15■■■□□ 2.74
ALDH1A3P47895 ZNRF2P1-201ENST00000441407 443 ntBASIC32.13■■■□□ 2.73
ALDH1A3P47895 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC32.1■■■□□ 2.73
ALDH1A3P47895 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
ALDH1A3P47895 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
ALDH1A3P47895 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.83■■■□□ 2.69
ALDH1A3P47895 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.82■■■□□ 2.68
ALDH1A3P47895 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
ALDH1A3P47895 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.79■■■□□ 2.68
ALDH1A3P47895 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.75■■■□□ 2.67
ALDH1A3P47895 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
ALDH1A3P47895 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.67
ALDH1A3P47895 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.65■■■□□ 2.66
ALDH1A3P47895 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
ALDH1A3P47895 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
ALDH1A3P47895 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.5■■■□□ 2.63
ALDH1A3P47895 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
ALDH1A3P47895 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
ALDH1A3P47895 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
ALDH1A3P47895 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
ALDH1A3P47895 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
ALDH1A3P47895 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.39■■■□□ 2.61
ALDH1A3P47895 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.38■■■□□ 2.61
ALDH1A3P47895 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
ALDH1A3P47895 AP002365.1-201ENST00000603448 772 ntBASIC31.34■■■□□ 2.61
ALDH1A3P47895 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC31.33■■■□□ 2.61
ALDH1A3P47895 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
ALDH1A3P47895 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
ALDH1A3P47895 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
ALDH1A3P47895 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
ALDH1A3P47895 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
ALDH1A3P47895 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC31.15■■■□□ 2.58
ALDH1A3P47895 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC31.14■■■□□ 2.58
ALDH1A3P47895 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC31.14■■■□□ 2.58
ALDH1A3P47895 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC31.14■■■□□ 2.58
ALDH1A3P47895 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.1■■■□□ 2.57
ALDH1A3P47895 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC31.1■■■□□ 2.57
ALDH1A3P47895 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC31.09■■■□□ 2.57
ALDH1A3P47895 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
ALDH1A3P47895 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
ALDH1A3P47895 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
ALDH1A3P47895 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
ALDH1A3P47895 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
ALDH1A3P47895 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.99■■■□□ 2.55
ALDH1A3P47895 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.96■■■□□ 2.55
ALDH1A3P47895 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.96■■■□□ 2.55
ALDH1A3P47895 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.95■■■□□ 2.55
ALDH1A3P47895 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.54
ALDH1A3P47895 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
ALDH1A3P47895 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.91■■■□□ 2.54
ALDH1A3P47895 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
ALDH1A3P47895 DYNLL1-208ENST00000550178 581 ntBASIC30.89■■■□□ 2.54
ALDH1A3P47895 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
ALDH1A3P47895 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
ALDH1A3P47895 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.84■■■□□ 2.53
ALDH1A3P47895 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC30.83■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms