Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
PPP3CBP16298 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC29.46■■■□□ 2.31
PPP3CBP16298 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
PPP3CBP16298 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
PPP3CBP16298 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
PPP3CBP16298 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC29.05■■■□□ 2.24
PPP3CBP16298 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC28.92■■■□□ 2.22
PPP3CBP16298 AL356512.1-201ENST00000607453 1739 ntBASIC28.91■■■□□ 2.22
PPP3CBP16298 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
PPP3CBP16298 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC28.7■■■□□ 2.19
PPP3CBP16298 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
PPP3CBP16298 HES6-203ENST00000409160 1600 ntTSL 2 BASIC28.21■■■□□ 2.11
PPP3CBP16298 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC28.21■■■□□ 2.11
PPP3CBP16298 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC28.12■■■□□ 2.09
PPP3CBP16298 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC28.09■■■□□ 2.09
PPP3CBP16298 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC28.08■■■□□ 2.09
PPP3CBP16298 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC28■■■□□ 2.07
PPP3CBP16298 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC27.93■■■□□ 2.06
PPP3CBP16298 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC27.89■■■□□ 2.05
PPP3CBP16298 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
PPP3CBP16298 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC27.81■■■□□ 2.04
PPP3CBP16298 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC27.77■■■□□ 2.04
PPP3CBP16298 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
PPP3CBP16298 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
PPP3CBP16298 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
PPP3CBP16298 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC27.57■■■□□ 2
PPP3CBP16298 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
PPP3CBP16298 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
PPP3CBP16298 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC27.5■■□□□ 1.99
PPP3CBP16298 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PPP3CBP16298 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PPP3CBP16298 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
PPP3CBP16298 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC27.23■■□□□ 1.95
PPP3CBP16298 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PPP3CBP16298 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC27.14■■□□□ 1.94
PPP3CBP16298 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PPP3CBP16298 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PPP3CBP16298 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
PPP3CBP16298 INO80B-203ENST00000409917 796 ntTSL 2 BASIC27■■□□□ 1.91
PPP3CBP16298 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
PPP3CBP16298 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
PPP3CBP16298 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
PPP3CBP16298 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC26.84■■□□□ 1.89
PPP3CBP16298 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
PPP3CBP16298 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PPP3CBP16298 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC26.76■■□□□ 1.87
PPP3CBP16298 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PPP3CBP16298 AC015813.7-201ENST00000623294 581 ntBASIC26.72■■□□□ 1.87
PPP3CBP16298 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PPP3CBP16298 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC26.69■■□□□ 1.86
PPP3CBP16298 AC006077.2-201ENST00000623591 457 ntBASIC26.68■■□□□ 1.86
PPP3CBP16298 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC26.66■■□□□ 1.86
PPP3CBP16298 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PPP3CBP16298 ZNRF2P1-201ENST00000441407 443 ntBASIC26.58■■□□□ 1.85
PPP3CBP16298 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
PPP3CBP16298 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC26.54■■□□□ 1.84
PPP3CBP16298 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
PPP3CBP16298 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
PPP3CBP16298 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
PPP3CBP16298 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PPP3CBP16298 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PPP3CBP16298 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC26.28■■□□□ 1.8
PPP3CBP16298 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
PPP3CBP16298 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PPP3CBP16298 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PPP3CBP16298 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC26.14■■□□□ 1.78
PPP3CBP16298 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
PPP3CBP16298 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC26.12■■□□□ 1.77
PPP3CBP16298 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
PPP3CBP16298 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.76
PPP3CBP16298 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PPP3CBP16298 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PPP3CBP16298 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
PPP3CBP16298 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC26■■□□□ 1.75
PPP3CBP16298 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PPP3CBP16298 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
PPP3CBP16298 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
PPP3CBP16298 AP002365.1-201ENST00000603448 772 ntBASIC25.92■■□□□ 1.74
PPP3CBP16298 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PPP3CBP16298 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PPP3CBP16298 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC25.89■■□□□ 1.74
PPP3CBP16298 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PPP3CBP16298 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PPP3CBP16298 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC25.83■■□□□ 1.73
PPP3CBP16298 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PPP3CBP16298 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC25.81■■□□□ 1.72
PPP3CBP16298 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PPP3CBP16298 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC25.75■■□□□ 1.71
PPP3CBP16298 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC25.74■■□□□ 1.71
PPP3CBP16298 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PPP3CBP16298 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC25.73■■□□□ 1.71
PPP3CBP16298 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC25.72■■□□□ 1.71
PPP3CBP16298 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC25.7■■□□□ 1.7
PPP3CBP16298 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
PPP3CBP16298 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PPP3CBP16298 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PPP3CBP16298 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC25.66■■□□□ 1.7
PPP3CBP16298 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PPP3CBP16298 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC25.65■■□□□ 1.7
PPP3CBP16298 ILK-212ENST00000532063 1617 ntTSL 2 BASIC25.65■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms