Protein–RNA interactions for Protein: P05388

RPLP0, 60S acidic ribosomal protein P0, humanhuman

Known RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPLP0P05388 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC33.38■■■□□ 2.93
RPLP0P05388 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC32.78■■■□□ 2.84
RPLP0P05388 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
RPLP0P05388 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
RPLP0P05388 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.26■■■□□ 2.75
RPLP0P05388 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
RPLP0P05388 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC32.19■■■□□ 2.74
RPLP0P05388 AL356512.1-201ENST00000607453 1739 ntBASIC32■■■□□ 2.71
RPLP0P05388 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
RPLP0P05388 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.31■■■□□ 2.6
RPLP0P05388 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC31.26■■■□□ 2.59
RPLP0P05388 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC31.24■■■□□ 2.59
RPLP0P05388 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC31.22■■■□□ 2.59
RPLP0P05388 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC31.17■■■□□ 2.58
RPLP0P05388 HES6-203ENST00000409160 1600 ntTSL 2 BASIC31.02■■■□□ 2.56
RPLP0P05388 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
RPLP0P05388 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
RPLP0P05388 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC30.95■■■□□ 2.54
RPLP0P05388 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC30.77■■■□□ 2.52
RPLP0P05388 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
RPLP0P05388 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC30.62■■■□□ 2.49
RPLP0P05388 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
RPLP0P05388 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
RPLP0P05388 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
RPLP0P05388 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
RPLP0P05388 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
RPLP0P05388 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.39■■■□□ 2.46
RPLP0P05388 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.37■■■□□ 2.45
RPLP0P05388 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
RPLP0P05388 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
RPLP0P05388 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
RPLP0P05388 INO80B-203ENST00000409917 796 ntTSL 2 BASIC30.21■■■□□ 2.43
RPLP0P05388 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC30.08■■■□□ 2.41
RPLP0P05388 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
RPLP0P05388 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
RPLP0P05388 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC29.81■■■□□ 2.36
RPLP0P05388 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC29.8■■■□□ 2.36
RPLP0P05388 AC015813.7-201ENST00000623294 581 ntBASIC29.76■■■□□ 2.35
RPLP0P05388 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC29.74■■■□□ 2.35
RPLP0P05388 AC006077.2-201ENST00000623591 457 ntBASIC29.74■■■□□ 2.35
RPLP0P05388 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC29.72■■■□□ 2.35
RPLP0P05388 ZNRF2P1-201ENST00000441407 443 ntBASIC29.71■■■□□ 2.35
RPLP0P05388 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
RPLP0P05388 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
RPLP0P05388 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
RPLP0P05388 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
RPLP0P05388 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
RPLP0P05388 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC29.49■■■□□ 2.31
RPLP0P05388 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC29.48■■■□□ 2.31
RPLP0P05388 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
RPLP0P05388 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
RPLP0P05388 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
RPLP0P05388 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
RPLP0P05388 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
RPLP0P05388 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC29.27■■■□□ 2.28
RPLP0P05388 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
RPLP0P05388 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
RPLP0P05388 AP002365.1-201ENST00000603448 772 ntBASIC28.99■■■□□ 2.23
RPLP0P05388 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC28.94■■■□□ 2.22
RPLP0P05388 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
RPLP0P05388 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC28.9■■■□□ 2.22
RPLP0P05388 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC28.89■■■□□ 2.22
RPLP0P05388 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
RPLP0P05388 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
RPLP0P05388 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
RPLP0P05388 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC28.85■■■□□ 2.21
RPLP0P05388 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
RPLP0P05388 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC28.83■■■□□ 2.21
RPLP0P05388 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
RPLP0P05388 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.81■■■□□ 2.2
RPLP0P05388 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC28.8■■■□□ 2.2
RPLP0P05388 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC28.8■■■□□ 2.2
RPLP0P05388 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
RPLP0P05388 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
RPLP0P05388 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC28.77■■■□□ 2.2
RPLP0P05388 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
RPLP0P05388 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC28.77■■■□□ 2.2
RPLP0P05388 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
RPLP0P05388 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC28.74■■■□□ 2.19
RPLP0P05388 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC28.73■■■□□ 2.19
RPLP0P05388 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
RPLP0P05388 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC28.7■■■□□ 2.19
RPLP0P05388 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28.69■■■□□ 2.18
RPLP0P05388 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC28.69■■■□□ 2.18
RPLP0P05388 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC28.66■■■□□ 2.18
RPLP0P05388 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
RPLP0P05388 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC28.64■■■□□ 2.18
RPLP0P05388 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC28.63■■■□□ 2.17
RPLP0P05388 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC28.61■■■□□ 2.17
RPLP0P05388 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
RPLP0P05388 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC28.58■■■□□ 2.17
RPLP0P05388 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
RPLP0P05388 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC28.55■■■□□ 2.16
RPLP0P05388 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC28.52■■■□□ 2.16
RPLP0P05388 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC28.52■■■□□ 2.16
RPLP0P05388 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
RPLP0P05388 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
RPLP0P05388 DYNLL1-208ENST00000550178 581 ntBASIC28.48■■■□□ 2.15
RPLP0P05388 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
RPLP0P05388 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC28.39■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms