Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC35.03■■■■□ 3.2
MT-CO1P00395 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
MT-CO1P00395 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC33.98■■■■□ 3.03
MT-CO1P00395 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.02
MT-CO1P00395 AL356512.1-201ENST00000607453 1739 ntBASIC33.93■■■■□ 3.02
MT-CO1P00395 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.89■■■■□ 3.02
MT-CO1P00395 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC33.83■■■■□ 3.01
MT-CO1P00395 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC33.23■■■□□ 2.91
MT-CO1P00395 HES6-203ENST00000409160 1600 ntTSL 2 BASIC33.18■■■□□ 2.9
MT-CO1P00395 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.02■■■□□ 2.88
MT-CO1P00395 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC32.97■■■□□ 2.87
MT-CO1P00395 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC32.69■■■□□ 2.82
MT-CO1P00395 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC32.68■■■□□ 2.82
MT-CO1P00395 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.57■■■□□ 2.8
MT-CO1P00395 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC32.53■■■□□ 2.8
MT-CO1P00395 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.49■■■□□ 2.79
MT-CO1P00395 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
MT-CO1P00395 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.41■■■□□ 2.78
MT-CO1P00395 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.34■■■□□ 2.77
MT-CO1P00395 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC32.26■■■□□ 2.75
MT-CO1P00395 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC32.11■■■□□ 2.73
MT-CO1P00395 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
MT-CO1P00395 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
MT-CO1P00395 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.66
MT-CO1P00395 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.69■■■□□ 2.66
MT-CO1P00395 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
MT-CO1P00395 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
MT-CO1P00395 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
MT-CO1P00395 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
MT-CO1P00395 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
MT-CO1P00395 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.47■■■□□ 2.63
MT-CO1P00395 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
MT-CO1P00395 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
MT-CO1P00395 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC31.35■■■□□ 2.61
MT-CO1P00395 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.32■■■□□ 2.6
MT-CO1P00395 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.28■■■□□ 2.6
MT-CO1P00395 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC31.28■■■□□ 2.6
MT-CO1P00395 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.23■■■□□ 2.59
MT-CO1P00395 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
MT-CO1P00395 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
MT-CO1P00395 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
MT-CO1P00395 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.01■■■□□ 2.56
MT-CO1P00395 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.55
MT-CO1P00395 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
MT-CO1P00395 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
MT-CO1P00395 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC30.93■■■□□ 2.54
MT-CO1P00395 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
MT-CO1P00395 AC015813.7-201ENST00000623294 581 ntBASIC30.91■■■□□ 2.54
MT-CO1P00395 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.87■■■□□ 2.53
MT-CO1P00395 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC30.83■■■□□ 2.53
MT-CO1P00395 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
MT-CO1P00395 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.7■■■□□ 2.5
MT-CO1P00395 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC30.64■■■□□ 2.5
MT-CO1P00395 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC30.62■■■□□ 2.49
MT-CO1P00395 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC30.59■■■□□ 2.49
MT-CO1P00395 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
MT-CO1P00395 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.49
MT-CO1P00395 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
MT-CO1P00395 AC006077.2-201ENST00000623591 457 ntBASIC30.53■■■□□ 2.48
MT-CO1P00395 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
MT-CO1P00395 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.51■■■□□ 2.47
MT-CO1P00395 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
MT-CO1P00395 ZNRF2P1-201ENST00000441407 443 ntBASIC30.42■■■□□ 2.46
MT-CO1P00395 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
MT-CO1P00395 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC30.36■■■□□ 2.45
MT-CO1P00395 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
MT-CO1P00395 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
MT-CO1P00395 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
MT-CO1P00395 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
MT-CO1P00395 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
MT-CO1P00395 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
MT-CO1P00395 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
MT-CO1P00395 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.07■■■□□ 2.4
MT-CO1P00395 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
MT-CO1P00395 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
MT-CO1P00395 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.03■■■□□ 2.4
MT-CO1P00395 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
MT-CO1P00395 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
MT-CO1P00395 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC29.95■■■□□ 2.39
MT-CO1P00395 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.93■■■□□ 2.38
MT-CO1P00395 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC29.91■■■□□ 2.38
MT-CO1P00395 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
MT-CO1P00395 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
MT-CO1P00395 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
MT-CO1P00395 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
MT-CO1P00395 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC29.76■■■□□ 2.36
MT-CO1P00395 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC29.76■■■□□ 2.35
MT-CO1P00395 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
MT-CO1P00395 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC29.74■■■□□ 2.35
MT-CO1P00395 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
MT-CO1P00395 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC29.7■■■□□ 2.35
MT-CO1P00395 AP002365.1-201ENST00000603448 772 ntBASIC29.7■■■□□ 2.35
MT-CO1P00395 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
MT-CO1P00395 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
MT-CO1P00395 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
MT-CO1P00395 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC29.63■■■□□ 2.33
MT-CO1P00395 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
MT-CO1P00395 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC29.61■■■□□ 2.33
MT-CO1P00395 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC29.59■■■□□ 2.33
MT-CO1P00395 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.57■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms