Protein–RNA interactions for Protein: O60359

CACNG3, Voltage-dependent calcium channel gamma-3 subunit, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNG3O60359 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC35.42■■■■□ 3.26
CACNG3O60359 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC34.62■■■■□ 3.13
CACNG3O60359 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
CACNG3O60359 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
CACNG3O60359 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
CACNG3O60359 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC34.23■■■■□ 3.07
CACNG3O60359 AL356512.1-201ENST00000607453 1739 ntBASIC34.1■■■■□ 3.05
CACNG3O60359 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC34.02■■■■□ 3.04
CACNG3O60359 HES6-203ENST00000409160 1600 ntTSL 2 BASIC33.5■■■□□ 2.95
CACNG3O60359 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC33.25■■■□□ 2.91
CACNG3O60359 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.24■■■□□ 2.91
CACNG3O60359 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC33.2■■■□□ 2.91
CACNG3O60359 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC33.19■■■□□ 2.9
CACNG3O60359 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC33.1■■■□□ 2.89
CACNG3O60359 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.07■■■□□ 2.89
CACNG3O60359 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC33■■■□□ 2.87
CACNG3O60359 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.99■■■□□ 2.87
CACNG3O60359 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC32.82■■■□□ 2.84
CACNG3O60359 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.78■■■□□ 2.84
CACNG3O60359 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
CACNG3O60359 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC32.55■■■□□ 2.8
CACNG3O60359 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
CACNG3O60359 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC32.45■■■□□ 2.79
CACNG3O60359 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
CACNG3O60359 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.18■■■□□ 2.74
CACNG3O60359 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
CACNG3O60359 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
CACNG3O60359 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CACNG3O60359 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.01■■■□□ 2.71
CACNG3O60359 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
CACNG3O60359 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CACNG3O60359 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CACNG3O60359 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
CACNG3O60359 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.85■■■□□ 2.69
CACNG3O60359 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.85■■■□□ 2.69
CACNG3O60359 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.82■■■□□ 2.69
CACNG3O60359 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CACNG3O60359 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
CACNG3O60359 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CACNG3O60359 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
CACNG3O60359 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC31.57■■■□□ 2.64
CACNG3O60359 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CACNG3O60359 AC015813.7-201ENST00000623294 581 ntBASIC31.46■■■□□ 2.63
CACNG3O60359 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CACNG3O60359 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.38■■■□□ 2.61
CACNG3O60359 AC006077.2-201ENST00000623591 457 ntBASIC31.34■■■□□ 2.61
CACNG3O60359 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.32■■■□□ 2.6
CACNG3O60359 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
CACNG3O60359 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
CACNG3O60359 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CACNG3O60359 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
CACNG3O60359 ZNRF2P1-201ENST00000441407 443 ntBASIC31.25■■■□□ 2.59
CACNG3O60359 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CACNG3O60359 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
CACNG3O60359 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.1■■■□□ 2.57
CACNG3O60359 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CACNG3O60359 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.04■■■□□ 2.56
CACNG3O60359 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
CACNG3O60359 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CACNG3O60359 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.96■■■□□ 2.55
CACNG3O60359 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
CACNG3O60359 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CACNG3O60359 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
CACNG3O60359 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
CACNG3O60359 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
CACNG3O60359 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC30.69■■■□□ 2.5
CACNG3O60359 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CACNG3O60359 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CACNG3O60359 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
CACNG3O60359 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC30.56■■■□□ 2.48
CACNG3O60359 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.51■■■□□ 2.47
CACNG3O60359 AP002365.1-201ENST00000603448 772 ntBASIC30.49■■■□□ 2.47
CACNG3O60359 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
CACNG3O60359 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.47■■■□□ 2.47
CACNG3O60359 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CACNG3O60359 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
CACNG3O60359 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CACNG3O60359 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.41■■■□□ 2.46
CACNG3O60359 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.39■■■□□ 2.45
CACNG3O60359 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CACNG3O60359 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CACNG3O60359 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.37■■■□□ 2.45
CACNG3O60359 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.37■■■□□ 2.45
CACNG3O60359 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.33■■■□□ 2.45
CACNG3O60359 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC30.32■■■□□ 2.44
CACNG3O60359 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC30.31■■■□□ 2.44
CACNG3O60359 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.29■■■□□ 2.44
CACNG3O60359 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.28■■■□□ 2.44
CACNG3O60359 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CACNG3O60359 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CACNG3O60359 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
CACNG3O60359 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC30.26■■■□□ 2.43
CACNG3O60359 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.23■■■□□ 2.43
CACNG3O60359 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.18■■■□□ 2.42
CACNG3O60359 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CACNG3O60359 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.17■■■□□ 2.42
CACNG3O60359 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
CACNG3O60359 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
CACNG3O60359 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
CACNG3O60359 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms