Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.43■■■■□ 3.42
CLDN5O00501 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
CLDN5O00501 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC35.35■■■■□ 3.25
CLDN5O00501 AL356512.1-201ENST00000607453 1739 ntBASIC35.32■■■■□ 3.25
CLDN5O00501 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
CLDN5O00501 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
CLDN5O00501 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC35.12■■■■□ 3.21
CLDN5O00501 HES6-203ENST00000409160 1600 ntTSL 2 BASIC34.56■■■■□ 3.12
CLDN5O00501 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC34.49■■■■□ 3.11
CLDN5O00501 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC34.38■■■■□ 3.09
CLDN5O00501 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC34.34■■■■□ 3.09
CLDN5O00501 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC34.05■■■■□ 3.04
CLDN5O00501 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC34.01■■■■□ 3.04
CLDN5O00501 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC33.9■■■■□ 3.02
CLDN5O00501 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC33.86■■■■□ 3.01
CLDN5O00501 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
CLDN5O00501 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC33.8■■■■□ 3
CLDN5O00501 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC33.69■■■□□ 2.98
CLDN5O00501 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33.63■■■□□ 2.97
CLDN5O00501 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC33.53■■■□□ 2.96
CLDN5O00501 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.41■■■□□ 2.94
CLDN5O00501 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC33.02■■■□□ 2.88
CLDN5O00501 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
CLDN5O00501 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
CLDN5O00501 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC32.92■■■□□ 2.86
CLDN5O00501 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
CLDN5O00501 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
CLDN5O00501 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
CLDN5O00501 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
CLDN5O00501 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.71■■■□□ 2.83
CLDN5O00501 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC32.65■■■□□ 2.82
CLDN5O00501 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
CLDN5O00501 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.58■■■□□ 2.81
CLDN5O00501 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC32.55■■■□□ 2.8
CLDN5O00501 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.55■■■□□ 2.8
CLDN5O00501 INO80B-203ENST00000409917 796 ntTSL 2 BASIC32.53■■■□□ 2.8
CLDN5O00501 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.49■■■□□ 2.79
CLDN5O00501 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
CLDN5O00501 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC32.34■■■□□ 2.77
CLDN5O00501 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.33■■■□□ 2.77
CLDN5O00501 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.32■■■□□ 2.76
CLDN5O00501 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
CLDN5O00501 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
CLDN5O00501 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC32.16■■■□□ 2.74
CLDN5O00501 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32.16■■■□□ 2.74
CLDN5O00501 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC32.12■■■□□ 2.73
CLDN5O00501 AC015813.7-201ENST00000623294 581 ntBASIC32.1■■■□□ 2.73
CLDN5O00501 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
CLDN5O00501 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CLDN5O00501 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CLDN5O00501 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CLDN5O00501 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
CLDN5O00501 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.84■■■□□ 2.69
CLDN5O00501 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.84■■■□□ 2.69
CLDN5O00501 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.82■■■□□ 2.68
CLDN5O00501 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.73■■■□□ 2.67
CLDN5O00501 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
CLDN5O00501 AC006077.2-201ENST00000623591 457 ntBASIC31.67■■■□□ 2.66
CLDN5O00501 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CLDN5O00501 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CLDN5O00501 ZNRF2P1-201ENST00000441407 443 ntBASIC31.56■■■□□ 2.64
CLDN5O00501 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
CLDN5O00501 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
CLDN5O00501 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
CLDN5O00501 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CLDN5O00501 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CLDN5O00501 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CLDN5O00501 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.32■■■□□ 2.6
CLDN5O00501 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CLDN5O00501 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CLDN5O00501 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CLDN5O00501 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CLDN5O00501 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
CLDN5O00501 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
CLDN5O00501 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CLDN5O00501 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
CLDN5O00501 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC31.06■■■□□ 2.56
CLDN5O00501 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CLDN5O00501 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CLDN5O00501 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.99■■■□□ 2.55
CLDN5O00501 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
CLDN5O00501 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
CLDN5O00501 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CLDN5O00501 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CLDN5O00501 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
CLDN5O00501 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.94■■■□□ 2.54
CLDN5O00501 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC30.93■■■□□ 2.54
CLDN5O00501 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
CLDN5O00501 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.88■■■□□ 2.53
CLDN5O00501 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.85■■■□□ 2.53
CLDN5O00501 AP002365.1-201ENST00000603448 772 ntBASIC30.84■■■□□ 2.53
CLDN5O00501 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CLDN5O00501 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.81■■■□□ 2.52
CLDN5O00501 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.8■■■□□ 2.52
CLDN5O00501 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC30.76■■■□□ 2.51
CLDN5O00501 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.75■■■□□ 2.51
CLDN5O00501 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC30.74■■■□□ 2.51
CLDN5O00501 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.74■■■□□ 2.51
CLDN5O00501 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CLDN5O00501 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms