Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 BCAR1-211ENST00000562556 4659 ntTSL 212.61□□□□□ -0.399e-7■■□□□ 12.7
LARP4Q71RC2 BCAR1-203ENST00000393422 4064 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.479e-7■■□□□ 12.7
LARP4Q71RC2 PHF5A-201ENST00000216252 1086 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.198e-7■■□□□ 12.7
LARP4Q71RC2 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.78■□□□□ 0.284e-10■■□□□ 12.7
LARP4Q71RC2 ASPSCR1-206ENST00000578361 590 ntTSL 213.53□□□□□ -0.241e-6■■□□□ 12.7
LARP4Q71RC2 ASPSCR1-217ENST00000583693 3976 ntTSL 212.63□□□□□ -0.391e-6■■□□□ 12.7
LARP4Q71RC2 ASPSCR1-215ENST00000583142 532 ntTSL 310□□□□□ -0.811e-6■■□□□ 12.7
LARP4Q71RC2 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.092e-20■■□□□ 12.7
LARP4Q71RC2 FDFT1-203ENST00000446331 1558 ntTSL 223.14■■□□□ 1.292e-19■■□□□ 12.7
LARP4Q71RC2 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.042e-19■■□□□ 12.7
LARP4Q71RC2 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.77■□□□□ 0.924e-6■■□□□ 12.7
LARP4Q71RC2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.43■□□□□ 0.862e-19■■□□□ 12.7
LARP4Q71RC2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.33■□□□□ 0.844e-6■■□□□ 12.7
LARP4Q71RC2 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.25■□□□□ 0.672e-19■■□□□ 12.7
LARP4Q71RC2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.47■□□□□ 0.552e-19■■□□□ 12.7
LARP4Q71RC2 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.57■□□□□ 0.44e-6■■□□□ 12.7
LARP4Q71RC2 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.262e-20■■□□□ 12.7
LARP4Q71RC2 NARF-203ENST00000374611 1722 ntTSL 515.65■□□□□ 0.14e-6■■□□□ 12.7
LARP4Q71RC2 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.42■□□□□ 0.064e-6■■□□□ 12.7
LARP4Q71RC2 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.062e-19■■□□□ 12.7
LARP4Q71RC2 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.242e-19■■□□□ 12.7
LARP4Q71RC2 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.43□□□□□ -0.262e-20■■□□□ 12.7
LARP4Q71RC2 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC12.64□□□□□ -0.392e-19■■□□□ 12.7
LARP4Q71RC2 NARF-201ENST00000309794 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.464e-6■■□□□ 12.7
LARP4Q71RC2 NARF-225ENST00000584445 2484 ntTSL 211.85□□□□□ -0.514e-6■■□□□ 12.7
LARP4Q71RC2 NARF-209ENST00000577812 2598 ntTSL 511.83□□□□□ -0.524e-6■■□□□ 12.7
LARP4Q71RC2 FDFT1-225ENST00000622850 1987 ntTSL 2 BASIC10.25□□□□□ -0.772e-19■■□□□ 12.7
LARP4Q71RC2 NARF-227ENST00000584965 300 ntTSL 39.69□□□□□ -0.864e-6■■□□□ 12.7
LARP4Q71RC2 NARF-211ENST00000578820 625 ntTSL 39.35□□□□□ -0.914e-6■■□□□ 12.7
LARP4Q71RC2 NARF-222ENST00000583908 430 ntTSL 39.12□□□□□ -0.954e-6■■□□□ 12.7
LARP4Q71RC2 RAN-211ENST00000541679 572 ntTSL 5 BASIC8.42□□□□□ -1.062e-20■■□□□ 12.7
LARP4Q71RC2 FDFT1-212ENST00000528643 1909 ntTSL 2 BASIC8.21□□□□□ -1.12e-19■■□□□ 12.7
LARP4Q71RC2 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.91□□□□□ -1.32e-19■■□□□ 12.7
LARP4Q71RC2 RAN-203ENST00000448750 2455 ntTSL 26.71□□□□□ -1.342e-20■■□□□ 12.7
LARP4Q71RC2 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.329e-9■■□□□ 12.7
LARP4Q71RC2 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.319e-9■■□□□ 12.7
LARP4Q71RC2 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.67■□□□□ 0.269e-9■■□□□ 12.7
LARP4Q71RC2 LGMN-217ENST00000557609 1832 ntTSL 516.49■□□□□ 0.239e-9■■□□□ 12.7
LARP4Q71RC2 LGMN-210ENST00000555169 543 ntTSL 215.84■□□□□ 0.139e-9■■□□□ 12.7
LARP4Q71RC2 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.41■□□□□ 0.069e-9■■□□□ 12.7
LARP4Q71RC2 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.183e-11■■□□□ 12.7
LARP4Q71RC2 RPS28-202ENST00000449223 1523 ntTSL 218.52■□□□□ 0.565e-9■■□□□ 12.7
LARP4Q71RC2 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.15e-9■■□□□ 12.7
LARP4Q71RC2 RPS28-204ENST00000602140 912 ntTSL 1 (best)11.93□□□□□ -0.55e-9■■□□□ 12.7
LARP4Q71RC2 CKAP5-207ENST00000526943 563 ntTSL 44.01□□□□□ -1.771e-11■■□□□ 12.7
LARP4Q71RC2 RPS3-211ENST00000528847 639 ntTSL 58.99□□□□□ -0.971e-16■■□□□ 12.7
LARP4Q71RC2 LGALS1-203ENST00000454173 331 ntTSL 512.75□□□□□ -0.372e-7■■□□□ 12.7
LARP4Q71RC2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.833e-9■■□□□ 12.7
LARP4Q71RC2 SLC2A4RG-207ENST00000493772 1328 ntTSL 1 (best)17.98■□□□□ 0.473e-9■■□□□ 12.7
LARP4Q71RC2 SLC2A4RG-202ENST00000473157 991 ntTSL 316.37■□□□□ 0.213e-9■■□□□ 12.7
LARP4Q71RC2 CARHSP1-215ENST00000570125 681 ntTSL 425.92■■□□□ 1.743e-12■■□□□ 12.7
LARP4Q71RC2 CARHSP1-211ENST00000568117 521 ntTSL 312.79□□□□□ -0.363e-12■■□□□ 12.7
LARP4Q71RC2 CARHSP1-210ENST00000567908 565 ntTSL 212.63□□□□□ -0.393e-12■■□□□ 12.7
LARP4Q71RC2 CLTB-207ENST00000510734 1489 ntTSL 221.88■■□□□ 1.094e-6■■□□□ 12.7
LARP4Q71RC2 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.024e-6■■□□□ 12.7
LARP4Q71RC2 LEMD2-202ENST00000421671 2323 ntTSL 321.34■■□□□ 1.014e-6■■□□□ 12.7
LARP4Q71RC2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.894e-6■■□□□ 12.7
LARP4Q71RC2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.894e-6■■□□□ 12.7
LARP4Q71RC2 SLC25A4-202ENST00000491736 1666 ntTSL 520.17■□□□□ 0.824e-6■■□□□ 12.7
LARP4Q71RC2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.724e-6■■□□□ 12.7
LARP4Q71RC2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.674e-6■■□□□ 12.7
LARP4Q71RC2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.654e-6■■□□□ 12.7
LARP4Q71RC2 CLTB-203ENST00000502877 552 ntTSL 218.55■□□□□ 0.564e-6■■□□□ 12.7
LARP4Q71RC2 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.33■□□□□ 0.534e-6■■□□□ 12.7
LARP4Q71RC2 FLII-209ENST00000487693 669 ntTSL 517.81■□□□□ 0.444e-6■■□□□ 12.7
LARP4Q71RC2 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.434e-6■■□□□ 12.7
LARP4Q71RC2 RABAC1-209ENST00000601476 771 ntTSL 217.56■□□□□ 0.42e-8■■□□□ 12.7
LARP4Q71RC2 TMEM147-206ENST00000595180 546 ntTSL 217.38■□□□□ 0.374e-6■■□□□ 12.7
LARP4Q71RC2 LEMD2-206ENST00000506578 1684 ntTSL 516.37■□□□□ 0.214e-6■■□□□ 12.7
LARP4Q71RC2 RABAC1-205ENST00000599219 799 ntTSL 216.25■□□□□ 0.192e-8■■□□□ 12.7
LARP4Q71RC2 FLII-204ENST00000465046 699 ntTSL 215.95■□□□□ 0.144e-6■■□□□ 12.7
LARP4Q71RC2 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.91■□□□□ 0.144e-6■■□□□ 12.7
LARP4Q71RC2 CLTB-205ENST00000508425 527 ntTSL 315.33■□□□□ 0.044e-6■■□□□ 12.7
LARP4Q71RC2 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.014e-6■■□□□ 12.7
LARP4Q71RC2 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.73□□□□□ -0.054e-6■■□□□ 12.7
LARP4Q71RC2 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.23□□□□□ -0.132e-8■■□□□ 12.7
LARP4Q71RC2 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.152e-8■■□□□ 12.7
LARP4Q71RC2 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.173e-6■■□□□ 12.7
LARP4Q71RC2 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.274e-6■■□□□ 12.7
LARP4Q71RC2 FLII-213ENST00000493600 656 ntTSL 213.21□□□□□ -0.294e-6■■□□□ 12.7
LARP4Q71RC2 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.322e-8■■□□□ 12.7
LARP4Q71RC2 LAMP2-201ENST00000200639 1867 ntAPPRIS P5 TSL 1 (best) BASIC12.78□□□□□ -0.363e-6■■□□□ 12.7
LARP4Q71RC2 ATG9A-220ENST00000475339 812 ntTSL 212.58□□□□□ -0.42e-8■■□□□ 12.7
LARP4Q71RC2 LEMD2-209ENST00000511171 4870 ntTSL 212.39□□□□□ -0.434e-6■■□□□ 12.7
LARP4Q71RC2 CDK5-201ENST00000297518 783 ntTSL 1 (best) BASIC10.97□□□□□ -0.652e-8■■□□□ 12.7
LARP4Q71RC2 AC120114.5-201ENST00000562285 556 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.784e-6■■□□□ 12.7
LARP4Q71RC2 SLC7A6-202ENST00000379152 5074 ntTSL 1 (best)8.77□□□□□ -1.014e-6■■□□□ 12.7
LARP4Q71RC2 HSD17B2-201ENST00000199936 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.024e-6■■□□□ 12.7
LARP4Q71RC2 SLC7A6-201ENST00000219343 6251 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.044e-6■■□□□ 12.7
LARP4Q71RC2 HEXB-204ENST00000505859 604 ntTSL 38.39□□□□□ -1.074e-6■■□□□ 12.7
LARP4Q71RC2 LAMP2-204ENST00000486593 1069 ntTSL 58.15□□□□□ -1.13e-6■■□□□ 12.7
LARP4Q71RC2 HSD17B2-205ENST00000568090 865 ntTSL 38.04□□□□□ -1.124e-6■■□□□ 12.7
LARP4Q71RC2 HEXB-202ENST00000503312 756 ntTSL 57.63□□□□□ -1.194e-6■■□□□ 12.7
LARP4Q71RC2 HEXB-205ENST00000509579 806 ntTSL 2 BASIC7.15□□□□□ -1.264e-6■■□□□ 12.7
LARP4Q71RC2 HEXB-210ENST00000513336 720 ntTSL 37.15□□□□□ -1.264e-6■■□□□ 12.7
LARP4Q71RC2 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.294e-6■■□□□ 12.7
LARP4Q71RC2 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC6.96□□□□□ -1.34e-6■■□□□ 12.7
LARP4Q71RC2 HEXB-211ENST00000513539 502 ntTSL 36.95□□□□□ -1.34e-6■■□□□ 12.7
LARP4Q71RC2 HSD17B2-204ENST00000566838 7925 ntTSL 26.88□□□□□ -1.314e-6■■□□□ 12.7
LARP4Q71RC2 HEXB-203ENST00000504459 899 ntTSL 34.41□□□□□ -1.74e-6■■□□□ 12.7
Retrieved 100 of 15,922 protein–RNA pairs in 281.2 ms