RNA–Protein interactions for RNA: ENST00000555169.1

LGMN-210, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-210ENST00000555169 NISCHQ9Y2I1 1504 aa39.7■■■■□ 3.95
LGMN-210ENST00000555169 CCDC180Q9P1Z9 1646 aa35.26■■■■□ 3.24
LGMN-210ENST00000555169 ABCC9O60706 1549 aa33.81■■■■□ 3
LGMN-210ENST00000555169 ZCCHC6Q5VYS8 1495 aaKnown RBP33.21■■■□□ 2.91
LGMN-210ENST00000555169 NACADO15069 1562 aa32.94■■■□□ 2.86
LGMN-210ENST00000555169 DCAF8L2P0C7V8 631 aa32.93■■■□□ 2.86
LGMN-210ENST00000555169 DCAF1Q9Y4B6 1507 aa32.92■■■□□ 2.86
LGMN-210ENST00000555169 RB1CC1Q8TDY2 1594 aa32.89■■■□□ 2.86
LGMN-210ENST00000555169 MYO15BQ96JP2 1530 aa32.87■■■□□ 2.85
LGMN-210ENST00000555169 UNC13AQ9UPW8 1703 aa32.15■■■□□ 2.74
LGMN-210ENST00000555169 SCRIBQ14160 1630 aa32.14■■■□□ 2.74
LGMN-210ENST00000555169 BICRAQ9NZM4 1560 aa31.71■■■□□ 2.67
LGMN-210ENST00000555169 SHROOM4Q9ULL8 1493 aa31.65■■■□□ 2.66
LGMN-210ENST00000555169 PABPN1Q86U42 306 aaKnown RBP eCLIP31.57■■■□□ 2.64
LGMN-210ENST00000555169 EIF4G1Q04637 1599 aaKnown RBP30.92■■■□□ 2.54
LGMN-210ENST00000555169 BAZ1AQ9NRL2 1556 aaPredicted RBP30.84■■■□□ 2.53
LGMN-210ENST00000555169 CECR2Q9BXF3 1484 aa30.77■■■□□ 2.52
LGMN-210ENST00000555169 SMARCA4P51532 1647 aa30.77■■■□□ 2.52
LGMN-210ENST00000555169 CC2D2AQ9P2K1 1620 aa30.67■■■□□ 2.5
LGMN-210ENST00000555169 MROH2BQ7Z745 1585 aa30.57■■■□□ 2.48
LGMN-210ENST00000555169 SMARCA2P51531 1590 aa30.5■■■□□ 2.47
LGMN-210ENST00000555169 PEG3Q9GZU2 1588 aa30.43■■■□□ 2.46
LGMN-210ENST00000555169 ATAD2BQ9ULI0 1458 aa30.38■■■□□ 2.45
LGMN-210ENST00000555169 RSF1Q96T23 1441 aaPredicted RBP30.37■■■□□ 2.45
LGMN-210ENST00000555169 WIZO95785 1651 aa30.34■■■□□ 2.45
LGMN-210ENST00000555169 HMGXB3Q12766 1538 aa30.3■■■□□ 2.44
LGMN-210ENST00000555169 DNAJC5BQ9UF47 199 aa30.29■■■□□ 2.44
LGMN-210ENST00000555169 NCAPD3P42695 1498 aa30.26■■■□□ 2.44
LGMN-210ENST00000555169 BAZ1BQ9UIG0 1483 aaKnown RBP30.26■■■□□ 2.44
LGMN-210ENST00000555169 TOP2AP11388 1531 aaKnown RBP30.09■■■□□ 2.41
LGMN-210ENST00000555169 SUPT5HO00267 1087 aaKnown RBP30.02■■■□□ 2.4
LGMN-210ENST00000555169 CCDC88BA6NC98 1476 aa29.61■■■□□ 2.33
LGMN-210ENST00000555169 LAMC3Q9Y6N6 1575 aa29.54■■■□□ 2.32
LGMN-210ENST00000555169 PRDM2Q13029 1718 aa29.47■■■□□ 2.31
LGMN-210ENST00000555169 CADPSQ9ULU8 1353 aa29.42■■■□□ 2.3
LGMN-210ENST00000555169 CFTRP13569 1480 aa29.36■■■□□ 2.29
LGMN-210ENST00000555169 NESP48681 1621 aa29.36■■■□□ 2.29
LGMN-210ENST00000555169 PDS5BQ9NTI5 1447 aa29.27■■■□□ 2.28
LGMN-210ENST00000555169 ERCC6Q03468 1493 aa29.23■■■□□ 2.27
LGMN-210ENST00000555169 KIF21AQ7Z4S6 1674 aa29.2■■■□□ 2.26
LGMN-210ENST00000555169 FANCD2Q9BXW9 1451 aa29.14■■■□□ 2.26
LGMN-210ENST00000555169 CEP164Q9UPV0 1460 aa29.12■■■□□ 2.25
LGMN-210ENST00000555169 MRC2Q9UBG0 1479 aa28.94■■■□□ 2.22
LGMN-210ENST00000555169 THOC2Q8NI27 1593 aaKnown RBP28.93■■■□□ 2.22
LGMN-210ENST00000555169 ABCC8Q09428 1581 aa28.84■■■□□ 2.21
LGMN-210ENST00000555169 WDR62O43379 1518 aa28.83■■■□□ 2.21
LGMN-210ENST00000555169 DNMBPQ6XZF7 1577 aa28.82■■■□□ 2.2
LGMN-210ENST00000555169 URB2Q14146 1524 aaKnown RBP28.76■■■□□ 2.19
LGMN-210ENST00000555169 WRNQ14191 1432 aaPredicted RBP eCLIP28.73■■■□□ 2.19
LGMN-210ENST00000555169 TOPBP1Q92547 1522 aa28.73■■■□□ 2.19
LGMN-210ENST00000555169 CUX2O14529 1486 aa28.69■■■□□ 2.18
LGMN-210ENST00000555169 BIVM-ERCC5R4GMW8 1640 aa28.68■■■□□ 2.18
LGMN-210ENST00000555169 CUX1P39880 1505 aa28.68■■■□□ 2.18
LGMN-210ENST00000555169 TOP2BQ02880 1626 aa28.65■■■□□ 2.18
LGMN-210ENST00000555169 SYNJ1O43426 1573 aa28.62■■■□□ 2.17
LGMN-210ENST00000555169 FGD5Q6ZNL6 1462 aa28.54■■■□□ 2.16
LGMN-210ENST00000555169 POLA1P09884 1462 aaPredicted RBP28.5■■■□□ 2.15
LGMN-210ENST00000555169 IFT140Q96RY7 1462 aa28.46■■■□□ 2.15
LGMN-210ENST00000555169 SOGA1O94964 1423 aa28.38■■■□□ 2.13
LGMN-210ENST00000555169 TRIM41Q8WV44 630 aa28.38■■■□□ 2.13
LGMN-210ENST00000555169 TARBP1Q13395 1621 aaKnown RBP28.37■■■□□ 2.13
LGMN-210ENST00000555169 WDR97A6NE52 1622 aa28.36■■■□□ 2.13
LGMN-210ENST00000555169 RAD54L2Q9Y4B4 1467 aa28.32■■■□□ 2.12
LGMN-210ENST00000555169 ABCA10Q8WWZ4 1543 aa28.28■■■□□ 2.12
LGMN-210ENST00000555169 EIF4G3O43432 1585 aaKnown RBP28.25■■■□□ 2.11
LGMN-210ENST00000555169 CHIC1Q5VXU3 224 aa28.24■■■□□ 2.11
LGMN-210ENST00000555169 ABCA5Q8WWZ7 1642 aa28.18■■■□□ 2.1
LGMN-210ENST00000555169 ZNF608Q9ULD9 1512 aaPredicted RBP28.17■■■□□ 2.1
LGMN-210ENST00000555169 PBRM1Q86U86 1689 aa28.16■■■□□ 2.1
LGMN-210ENST00000555169 KIF27Q86VH2 1401 aa28.11■■■□□ 2.09
LGMN-210ENST00000555169 GAPVD1Q14C86 1478 aa28.11■■■□□ 2.09
LGMN-210ENST00000555169 TDRD9Q8NDG6 1382 aaKnown RBP28.1■■■□□ 2.09
LGMN-210ENST00000555169 AQRO60306 1485 aaKnown RBP eCLIP28.08■■■□□ 2.09
LGMN-210ENST00000555169 GRIN2BQ13224 1484 aa28.05■■■□□ 2.08
LGMN-210ENST00000555169 ERICH3Q5RHP9 1530 aa28.01■■■□□ 2.07
LGMN-210ENST00000555169 EEA1Q15075 1411 aa27.98■■■□□ 2.07
LGMN-210ENST00000555169 CUL7Q14999 1698 aa27.96■■■□□ 2.07
LGMN-210ENST00000555169 MAGI1Q96QZ7 1491 aaPredicted RBP27.95■■■□□ 2.07
LGMN-210ENST00000555169 SNAPC4Q5SXM2 1469 aa27.94■■■□□ 2.06
LGMN-210ENST00000555169 ADAMTS12P58397 1594 aa27.9■■■□□ 2.06
LGMN-210ENST00000555169 RUSC2Q8N2Y8 1516 aa27.84■■■□□ 2.05
LGMN-210ENST00000555169 CHD1O14646 1710 aa27.83■■■□□ 2.05
LGMN-210ENST00000555169 SYNJ2O15056 1496 aa27.81■■■□□ 2.04
LGMN-210ENST00000555169 FHAD1B1AJZ9 1412 aa27.8■■■□□ 2.04
LGMN-210ENST00000555169 IGF1RP08069 1367 aa27.76■■■□□ 2.03
LGMN-210ENST00000555169 FAM9AQ8IZU1 332 aaPredicted RBP27.73■■■□□ 2.03
LGMN-210ENST00000555169 CHMP7Q8WUX9 453 aaPredicted RBP27.72■■■□□ 2.03
LGMN-210ENST00000555169 FBLN2P98095 1184 aa27.71■■■□□ 2.03
LGMN-210ENST00000555169 CARMIL1Q5VZK9 1371 aa27.71■■■□□ 2.03
LGMN-210ENST00000555169 CSRNP3Q8WYN3 585 aa27.7■■■□□ 2.02
LGMN-210ENST00000555169 GRIN2AQ12879 1464 aa27.68■■■□□ 2.02
LGMN-210ENST00000555169 RAPGEF2Q9Y4G8 1499 aa27.66■■■□□ 2.02
LGMN-210ENST00000555169 KIF21BO75037 1637 aa27.66■■■□□ 2.02
LGMN-210ENST00000555169 PRXQ9BXM0 1461 aa27.62■■■□□ 2.01
LGMN-210ENST00000555169 CTTNBP2Q8WZ74 1663 aa27.55■■■□□ 2
LGMN-210ENST00000555169 GOLGA3Q08378 1498 aa27.51■■■□□ 2
LGMN-210ENST00000555169 CEP170Q5SW79 1584 aa27.51■■□□□ 1.99
LGMN-210ENST00000555169 OSCARQ8IYS5 282 aa27.49■■□□□ 1.99
LGMN-210ENST00000555169 NUP160Q12769 1436 aa27.49■■□□□ 1.99
LGMN-210ENST00000555169 CLASP1Q7Z460 1538 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms