RNA–Protein interactions for RNA: ENST00000200639.8

LAMP2-201, Transcript of lysosomal associated membrane protein 2, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene LAMP2, Length 1,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP2-201ENST00000200639 NISCHQ9Y2I1 1504 aa30.88■■■□□ 2.53
LAMP2-201ENST00000200639 CCDC180Q9P1Z9 1646 aa27.07■■□□□ 1.92
LAMP2-201ENST00000200639 ABCC9O60706 1549 aa26.09■■□□□ 1.77
LAMP2-201ENST00000200639 ZCCHC6Q5VYS8 1495 aaKnown RBP25.83■■□□□ 1.73
LAMP2-201ENST00000200639 DCAF8L2P0C7V8 631 aa25.83■■□□□ 1.72
LAMP2-201ENST00000200639 DCAF1Q9Y4B6 1507 aa25.49■■□□□ 1.67
LAMP2-201ENST00000200639 NACADO15069 1562 aa25.35■■□□□ 1.65
LAMP2-201ENST00000200639 MYO15BQ96JP2 1530 aa25.34■■□□□ 1.65
LAMP2-201ENST00000200639 RB1CC1Q8TDY2 1594 aa25.24■■□□□ 1.63
LAMP2-201ENST00000200639 SHROOM4Q9ULL8 1493 aa25■■□□□ 1.59
LAMP2-201ENST00000200639 SCRIBQ14160 1630 aa24.9■■□□□ 1.58
LAMP2-201ENST00000200639 UNC13AQ9UPW8 1703 aa24.7■■□□□ 1.54
LAMP2-201ENST00000200639 PABPN1Q86U42 306 aaKnown RBP eCLIP24.58■■□□□ 1.53
LAMP2-201ENST00000200639 BICRAQ9NZM4 1560 aa24.47■■□□□ 1.51
LAMP2-201ENST00000200639 CECR2Q9BXF3 1484 aa24.06■■□□□ 1.44
LAMP2-201ENST00000200639 SUPT5HO00267 1087 aaKnown RBP23.88■■□□□ 1.41
LAMP2-201ENST00000200639 BAZ1AQ9NRL2 1556 aaPredicted RBP23.87■■□□□ 1.41
LAMP2-201ENST00000200639 MROH2BQ7Z745 1585 aa23.86■■□□□ 1.41
LAMP2-201ENST00000200639 RSF1Q96T23 1441 aaPredicted RBP23.81■■□□□ 1.4
LAMP2-201ENST00000200639 SMARCA4P51532 1647 aa23.81■■□□□ 1.4
LAMP2-201ENST00000200639 EIF4G1Q04637 1599 aaKnown RBP23.79■■□□□ 1.4
LAMP2-201ENST00000200639 WIZO95785 1651 aa23.64■■□□□ 1.37
LAMP2-201ENST00000200639 CC2D2AQ9P2K1 1620 aa23.56■■□□□ 1.36
LAMP2-201ENST00000200639 ATAD2BQ9ULI0 1458 aa23.56■■□□□ 1.36
LAMP2-201ENST00000200639 SMARCA2P51531 1590 aa23.52■■□□□ 1.36
LAMP2-201ENST00000200639 PEG3Q9GZU2 1588 aa23.51■■□□□ 1.35
LAMP2-201ENST00000200639 DNAJC5BQ9UF47 199 aa23.44■■□□□ 1.34
LAMP2-201ENST00000200639 NCAPD3P42695 1498 aa23.42■■□□□ 1.34
LAMP2-201ENST00000200639 BAZ1BQ9UIG0 1483 aaKnown RBP23.41■■□□□ 1.34
LAMP2-201ENST00000200639 TOP2AP11388 1531 aaKnown RBP23.35■■□□□ 1.33
LAMP2-201ENST00000200639 HMGXB3Q12766 1538 aa23.31■■□□□ 1.32
LAMP2-201ENST00000200639 CCDC88BA6NC98 1476 aa23.15■■□□□ 1.3
LAMP2-201ENST00000200639 CADPSQ9ULU8 1353 aa22.83■■□□□ 1.24
LAMP2-201ENST00000200639 CFTRP13569 1480 aa22.78■■□□□ 1.24
LAMP2-201ENST00000200639 NESP48681 1621 aa22.76■■□□□ 1.23
LAMP2-201ENST00000200639 LAMC3Q9Y6N6 1575 aa22.67■■□□□ 1.22
LAMP2-201ENST00000200639 CHIC1Q5VXU3 224 aa22.58■■□□□ 1.21
LAMP2-201ENST00000200639 PRDM2Q13029 1718 aa22.58■■□□□ 1.21
LAMP2-201ENST00000200639 PDS5BQ9NTI5 1447 aa22.57■■□□□ 1.2
LAMP2-201ENST00000200639 FANCD2Q9BXW9 1451 aa22.56■■□□□ 1.2
LAMP2-201ENST00000200639 ABCC8Q09428 1581 aa22.53■■□□□ 1.2
LAMP2-201ENST00000200639 TRIM41Q8WV44 630 aa22.47■■□□□ 1.19
LAMP2-201ENST00000200639 CEP164Q9UPV0 1460 aa22.45■■□□□ 1.18
LAMP2-201ENST00000200639 WRNQ14191 1432 aaPredicted RBP eCLIP22.44■■□□□ 1.18
LAMP2-201ENST00000200639 KIF21AQ7Z4S6 1674 aa22.43■■□□□ 1.18
LAMP2-201ENST00000200639 ERCC6Q03468 1493 aa22.42■■□□□ 1.18
LAMP2-201ENST00000200639 SYNJ1O43426 1573 aa22.33■■□□□ 1.16
LAMP2-201ENST00000200639 CUX1P39880 1505 aa22.33■■□□□ 1.16
LAMP2-201ENST00000200639 URB2Q14146 1524 aaKnown RBP22.28■■□□□ 1.16
LAMP2-201ENST00000200639 MRC2Q9UBG0 1479 aa22.27■■□□□ 1.15
LAMP2-201ENST00000200639 TOP2BQ02880 1626 aa22.26■■□□□ 1.15
LAMP2-201ENST00000200639 TOPBP1Q92547 1522 aa22.25■■□□□ 1.15
LAMP2-201ENST00000200639 DNMBPQ6XZF7 1577 aa22.24■■□□□ 1.15
LAMP2-201ENST00000200639 BIVM-ERCC5R4GMW8 1640 aa22.22■■□□□ 1.15
LAMP2-201ENST00000200639 FGD5Q6ZNL6 1462 aa22.16■■□□□ 1.14
LAMP2-201ENST00000200639 THOC2Q8NI27 1593 aaKnown RBP22.15■■□□□ 1.14
LAMP2-201ENST00000200639 WDR62O43379 1518 aa22.14■■□□□ 1.13
LAMP2-201ENST00000200639 POLA1P09884 1462 aaPredicted RBP22.11■■□□□ 1.13
LAMP2-201ENST00000200639 SOGA1O94964 1423 aa22.09■■□□□ 1.13
LAMP2-201ENST00000200639 FAM9AQ8IZU1 332 aaPredicted RBP22.07■■□□□ 1.12
LAMP2-201ENST00000200639 RAD54L2Q9Y4B4 1467 aa22.07■■□□□ 1.12
LAMP2-201ENST00000200639 CUX2O14529 1486 aa22■■□□□ 1.11
LAMP2-201ENST00000200639 RUSC2Q8N2Y8 1516 aa21.98■■□□□ 1.11
LAMP2-201ENST00000200639 ABCA10Q8WWZ4 1543 aa21.94■■□□□ 1.1
LAMP2-201ENST00000200639 IFT140Q96RY7 1462 aa21.94■■□□□ 1.1
LAMP2-201ENST00000200639 TARBP1Q13395 1621 aaKnown RBP21.93■■□□□ 1.1
LAMP2-201ENST00000200639 TDRD9Q8NDG6 1382 aaKnown RBP21.92■■□□□ 1.1
LAMP2-201ENST00000200639 KIF27Q86VH2 1401 aa21.92■■□□□ 1.1
LAMP2-201ENST00000200639 CSRNP3Q8WYN3 585 aa21.88■■□□□ 1.09
LAMP2-201ENST00000200639 EEA1Q15075 1411 aa21.87■■□□□ 1.09
LAMP2-201ENST00000200639 ZNF608Q9ULD9 1512 aaPredicted RBP21.85■■□□□ 1.09
LAMP2-201ENST00000200639 WDR97A6NE52 1622 aa21.84■■□□□ 1.09
LAMP2-201ENST00000200639 AQRO60306 1485 aaKnown RBP eCLIP21.84■■□□□ 1.09
LAMP2-201ENST00000200639 EHMT2Q96KQ7 1210 aa21.81■■□□□ 1.08
LAMP2-201ENST00000200639 GAPVD1Q14C86 1478 aa21.81■■□□□ 1.08
LAMP2-201ENST00000200639 IGF1RP08069 1367 aa21.79■■□□□ 1.08
LAMP2-201ENST00000200639 ABCA5Q8WWZ7 1642 aa21.76■■□□□ 1.07
LAMP2-201ENST00000200639 LOC105371045A0A1W2PR82 267 aa21.76■■□□□ 1.07
LAMP2-201ENST00000200639 EIF4G3O43432 1585 aaKnown RBP21.72■■□□□ 1.07
LAMP2-201ENST00000200639 GRIN2BQ13224 1484 aa21.69■■□□□ 1.06
LAMP2-201ENST00000200639 ERICH3Q5RHP9 1530 aa21.67■■□□□ 1.06
LAMP2-201ENST00000200639 CARMIL1Q5VZK9 1371 aa21.67■■□□□ 1.06
LAMP2-201ENST00000200639 PBRM1Q86U86 1689 aa21.66■■□□□ 1.06
LAMP2-201ENST00000200639 PRXQ9BXM0 1461 aa21.63■■□□□ 1.05
LAMP2-201ENST00000200639 UBTFP17480 764 aaKnown RBP21.6■■□□□ 1.05
LAMP2-201ENST00000200639 SNAPC4Q5SXM2 1469 aa21.6■■□□□ 1.05
LAMP2-201ENST00000200639 RAPGEF2Q9Y4G8 1499 aa21.6■■□□□ 1.05
LAMP2-201ENST00000200639 CUL7Q14999 1698 aa21.58■■□□□ 1.05
LAMP2-201ENST00000200639 KIF21BO75037 1637 aa21.58■■□□□ 1.04
LAMP2-201ENST00000200639 FBLN2P98095 1184 aa21.56■■□□□ 1.04
LAMP2-201ENST00000200639 FHAD1B1AJZ9 1412 aa21.56■■□□□ 1.04
LAMP2-201ENST00000200639 GOLGA3Q08378 1498 aa21.55■■□□□ 1.04
LAMP2-201ENST00000200639 MAGI1Q96QZ7 1491 aaPredicted RBP21.54■■□□□ 1.04
LAMP2-201ENST00000200639 CHMP7Q8WUX9 453 aaPredicted RBP21.54■■□□□ 1.04
LAMP2-201ENST00000200639 ADAMTS12P58397 1594 aa21.51■■□□□ 1.03
LAMP2-201ENST00000200639 SYNJ2O15056 1496 aa21.47■■□□□ 1.03
LAMP2-201ENST00000200639 TNIKQ9UKE5 1360 aa21.43■■□□□ 1.02
LAMP2-201ENST00000200639 RANGAP1P46060 587 aaPredicted RBP21.42■■□□□ 1.02
LAMP2-201ENST00000200639 GRIN2AQ12879 1464 aa21.41■■□□□ 1.02
LAMP2-201ENST00000200639 CHD1O14646 1710 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms