RNA–Protein interactions for RNA: ENST00000486593.5

LAMP2-204, Transcript of lysosomal associated membrane protein 2, humanhuman

TSL 5

Gene LAMP2, Length 1,069 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP2-204ENST00000486593 AEBP2Q6ZN18 517 aaPredicted RBP28.79■■■□□ 2.2
LAMP2-204ENST00000486593 CHIC1Q5VXU3 224 aa27.59■■■□□ 2.01
LAMP2-204ENST00000486593 PHF23Q9BUL5 403 aaPredicted RBP24.35■■□□□ 1.49
LAMP2-204ENST00000486593 SENP3Q9H4L4 574 aaPredicted RBP24.28■■□□□ 1.48
LAMP2-204ENST00000486593 FOXD1Q16676 465 aa22.72■■□□□ 1.23
LAMP2-204ENST00000486593 PLPPR3Q6T4P5 718 aa22.14■■□□□ 1.13
LAMP2-204ENST00000486593 PPP6R1Q9UPN7 881 aa21.64■■□□□ 1.05
LAMP2-204ENST00000486593 ADRA2BP18089 450 aa21.54■■□□□ 1.04
LAMP2-204ENST00000486593 PIAS4Q8N2W9 510 aaPredicted RBP21.24■□□□□ 0.99
LAMP2-204ENST00000486593 MSH5O43196 834 aa20.94■□□□□ 0.94
LAMP2-204ENST00000486593 POTEDQ86YR6 584 aa19.91■□□□□ 0.78
LAMP2-204ENST00000486593 MAPK8IP2Q13387 824 aaPredicted RBP19.7■□□□□ 0.74
LAMP2-204ENST00000486593 NISCHQ9Y2I1 1504 aa19.55■□□□□ 0.72
LAMP2-204ENST00000486593 PPP4R3CPQ6ZMV5 832 aa19.53■□□□□ 0.72
LAMP2-204ENST00000486593 SCAF1Q9H7N4 1312 aaKnown RBP19.46■□□□□ 0.71
LAMP2-204ENST00000486593 DMRT2Q9Y5R5 561 aa19.38■□□□□ 0.69
LAMP2-204ENST00000486593 CNKSR2Q8WXI2 1034 aa19.01■□□□□ 0.63
LAMP2-204ENST00000486593 HOXD11P31277 338 aaPredicted RBP18.82■□□□□ 0.6
LAMP2-204ENST00000486593 NCBP3Q53F19 620 aaKnown RBP18.75■□□□□ 0.59
LAMP2-204ENST00000486593 RNF216Q9NWF9 866 aaPredicted RBP18.75■□□□□ 0.59
LAMP2-204ENST00000486593 KCNA4P22459 653 aa18.69■□□□□ 0.58
LAMP2-204ENST00000486593 NPM3O75607 178 aaKnown RBP18.67■□□□□ 0.58
LAMP2-204ENST00000486593 DCAF8L1A6NGE4 600 aa18.5■□□□□ 0.55
LAMP2-204ENST00000486593 DNAJC5BQ9UF47 199 aa18.12■□□□□ 0.49
LAMP2-204ENST00000486593 RNF39Q9H2S5 420 aa18.01■□□□□ 0.47
LAMP2-204ENST00000486593 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.86■□□□□ 0.45
LAMP2-204ENST00000486593 SLC4A2P04920 1241 aa17.78■□□□□ 0.44
LAMP2-204ENST00000486593 CACNB1Q02641 598 aaPredicted RBP17.76■□□□□ 0.43
LAMP2-204ENST00000486593 C1QBPQ07021 282 aaKnown RBP17.68■□□□□ 0.42
LAMP2-204ENST00000486593 U3KPZ7 1027 aaPredicted RBP17.64■□□□□ 0.41
LAMP2-204ENST00000486593 SLC4A1APQ9BWU0 796 aaKnown RBP17.62■□□□□ 0.41
LAMP2-204ENST00000486593 SPINK5Q9NQ38 1064 aaPredicted RBP17.3■□□□□ 0.36
LAMP2-204ENST00000486593 ZBTB22O15209 634 aa17.28■□□□□ 0.36
LAMP2-204ENST00000486593 CCDC180Q9P1Z9 1646 aa17.27■□□□□ 0.36
LAMP2-204ENST00000486593 FOXD4L1Q9NU39 408 aa17.2■□□□□ 0.34
LAMP2-204ENST00000486593 MYCNP04198 464 aaPredicted RBP17.15■□□□□ 0.34
LAMP2-204ENST00000486593 CAPN15O75808 1086 aa17.12■□□□□ 0.33
LAMP2-204ENST00000486593 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.06■□□□□ 0.32
LAMP2-204ENST00000486593 HNRNPUL2Q1KMD3 747 aaKnown RBP17.06■□□□□ 0.32
LAMP2-204ENST00000486593 SAMD1Q6SPF0 538 aaPredicted RBP17.04■□□□□ 0.32
LAMP2-204ENST00000486593 DSG3P32926 999 aa17.01■□□□□ 0.31
LAMP2-204ENST00000486593 TRHP20396 242 aaPredicted RBP16.98■□□□□ 0.31
LAMP2-204ENST00000486593 APLP2Q06481 763 aa16.92■□□□□ 0.3
LAMP2-204ENST00000486593 ATF5Q9Y2D1 282 aaPredicted RBP16.92■□□□□ 0.3
LAMP2-204ENST00000486593 ZNF219Q9P2Y4 722 aaPredicted RBP16.87■□□□□ 0.29
LAMP2-204ENST00000486593 ABCB7O75027 752 aa16.85■□□□□ 0.29
LAMP2-204ENST00000486593 CSRNP3Q8WYN3 585 aa16.78■□□□□ 0.28
LAMP2-204ENST00000486593 EHMT2Q96KQ7 1210 aa16.72■□□□□ 0.27
LAMP2-204ENST00000486593 POLA2Q14181 598 aa16.63■□□□□ 0.25
LAMP2-204ENST00000486593 ATXN8OSP0DMR3 200 aa16.6■□□□□ 0.25
LAMP2-204ENST00000486593 ZCCHC6Q5VYS8 1495 aaKnown RBP16.41■□□□□ 0.22
LAMP2-204ENST00000486593 DCAF1Q9Y4B6 1507 aa16.29■□□□□ 0.2
LAMP2-204ENST00000486593 ABCC9O60706 1549 aa16.24■□□□□ 0.19
LAMP2-204ENST00000486593 MYO15BQ96JP2 1530 aa16.2■□□□□ 0.18
LAMP2-204ENST00000486593 ZBTB12Q9Y330 459 aaPredicted RBP16.17■□□□□ 0.18
LAMP2-204ENST00000486593 MKRN4PQ13434 485 aaPredicted RBP16.14■□□□□ 0.17
LAMP2-204ENST00000486593 OSCARQ8IYS5 282 aa16.11■□□□□ 0.17
LAMP2-204ENST00000486593 NACADO15069 1562 aa16.09■□□□□ 0.17
LAMP2-204ENST00000486593 RBM42Q9BTD8 480 aaKnown RBP16.05■□□□□ 0.16
LAMP2-204ENST00000486593 DCAF8L2P0C7V8 631 aa15.99■□□□□ 0.15
LAMP2-204ENST00000486593 FBLN2P98095 1184 aa15.98■□□□□ 0.15
LAMP2-204ENST00000486593 RB1CC1Q8TDY2 1594 aa15.98■□□□□ 0.15
LAMP2-204ENST00000486593 AKT1S1Q96B36 256 aa15.84■□□□□ 0.13
LAMP2-204ENST00000486593 SPDYE2BA6NHP3 402 aa15.78■□□□□ 0.12
LAMP2-204ENST00000486593 SPDYE6P0CI01 402 aa15.78■□□□□ 0.12
LAMP2-204ENST00000486593 SPDYE2Q495Y8 402 aa15.78■□□□□ 0.12
LAMP2-204ENST00000486593 REM2Q8IYK8 340 aaPredicted RBP15.77■□□□□ 0.12
LAMP2-204ENST00000486593 SSUH2Q9Y2M2 353 aa15.7■□□□□ 0.1
LAMP2-204ENST00000486593 ZNF692Q9BU19 519 aaPredicted RBP15.68■□□□□ 0.1
LAMP2-204ENST00000486593 SCRIBQ14160 1630 aa15.65■□□□□ 0.1
LAMP2-204ENST00000486593 CHRDL2Q6WN34 429 aa15.65■□□□□ 0.1
LAMP2-204ENST00000486593 POTEHQ6S545 545 aa15.64■□□□□ 0.09
LAMP2-204ENST00000486593 PITPNM1O00562 1244 aa15.61■□□□□ 0.09
LAMP2-204ENST00000486593 SHROOM4Q9ULL8 1493 aa15.59■□□□□ 0.09
LAMP2-204ENST00000486593 UNC13AQ9UPW8 1703 aa15.55■□□□□ 0.08
LAMP2-204ENST00000486593 PABPN1Q86U42 306 aaKnown RBP eCLIP15.49■□□□□ 0.07
LAMP2-204ENST00000486593 SPDYE4A6NLX3 237 aa15.45■□□□□ 0.06
LAMP2-204ENST00000486593 PIP4P2Q8N4L2 257 aa15.43■□□□□ 0.06
LAMP2-204ENST00000486593 FXR2P51116 673 aaKnown RBP eCLIP15.39■□□□□ 0.05
LAMP2-204ENST00000486593 SPDYE1Q8NFV5 336 aaPredicted RBP15.39■□□□□ 0.05
LAMP2-204ENST00000486593 CLEC11AQ9Y240 323 aa15.38■□□□□ 0.05
LAMP2-204ENST00000486593 BICRAQ9NZM4 1560 aa15.37■□□□□ 0.05
LAMP2-204ENST00000486593 PROM2Q8N271 834 aa15.21■□□□□ 0.03
LAMP2-204ENST00000486593 BAZ1AQ9NRL2 1556 aaPredicted RBP15.17■□□□□ 0.02
LAMP2-204ENST00000486593 PRKAR2AP13861 404 aaKnown RBP15.17■□□□□ 0.02
LAMP2-204ENST00000486593 PRR29P0C7W0 189 aa15.16■□□□□ 0.02
LAMP2-204ENST00000486593 CHADLQ6NUI6 762 aa15.15■□□□□ 0.02
LAMP2-204ENST00000486593 FKBP8Q14318 412 aa15.11■□□□□ 0.01
LAMP2-204ENST00000486593 CECR2Q9BXF3 1484 aa15.08■□□□□ 0
LAMP2-204ENST00000486593 SMARCA4P51532 1647 aa15.07■□□□□ 0
LAMP2-204ENST00000486593 RSF1Q96T23 1441 aaPredicted RBP15.03■□□□□ -0
LAMP2-204ENST00000486593 STAG3Q9UJ98 1225 aa15.03■□□□□ -0
LAMP2-204ENST00000486593 MROH2BQ7Z745 1585 aa15.02□□□□□ -0.01
LAMP2-204ENST00000486593 CREBZFQ9NS37 354 aa15□□□□□ -0.01
LAMP2-204ENST00000486593 EVX2Q03828 476 aa14.99□□□□□ -0.01
LAMP2-204ENST00000486593 EIF4G1Q04637 1599 aaKnown RBP14.98□□□□□ -0.01
LAMP2-204ENST00000486593 PEG3Q9GZU2 1588 aa14.97□□□□□ -0.01
LAMP2-204ENST00000486593 HAX1O00165 279 aa14.95□□□□□ -0.02
LAMP2-204ENST00000486593 SUPT5HO00267 1087 aaKnown RBP14.93□□□□□ -0.02
LAMP2-204ENST00000486593 SMARCA2P51531 1590 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms