Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRBV25-1A0A075B6N4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 MIR663A-201ENST00000385250 93 ntBASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 AC026185.1-201ENST00000445748 174 ntBASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 RAP2CP1-201ENST00000605103 478 ntBASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV25-1A0A075B6N4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 AC073210.2-201ENST00000430369 194 ntBASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV25-1A0A075B6N4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV25-1A0A075B6N4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC13.56□□□□□ -0.24
TRBV25-1A0A075B6N4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC13.56□□□□□ -0.24
TRBV25-1A0A075B6N4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TRBV25-1A0A075B6N4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TRBV25-1A0A075B6N4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms