RNA–Protein interactions for RNA: ENST00000345451.7

CPEB2-202, Transcript of cytoplasmic polyadenylation element binding protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CPEB2, Length 2,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB2-202ENST00000345451 NISCHQ9Y2I1 1504 aa42.13■■■■■ 4.34
CPEB2-202ENST00000345451 CCDC180Q9P1Z9 1646 aa36.63■■■■□ 3.45
CPEB2-202ENST00000345451 ZCCHC6Q5VYS8 1495 aaKnown RBP35.52■■■■□ 3.28
CPEB2-202ENST00000345451 DCAF1Q9Y4B6 1507 aa34.93■■■■□ 3.18
CPEB2-202ENST00000345451 SHROOM4Q9ULL8 1493 aa34.52■■■■□ 3.12
CPEB2-202ENST00000345451 DCAF8L2P0C7V8 631 aa34.41■■■■□ 3.1
CPEB2-202ENST00000345451 MYO15BQ96JP2 1530 aa34.35■■■■□ 3.09
CPEB2-202ENST00000345451 ABCC9O60706 1549 aa34.03■■■■□ 3.04
CPEB2-202ENST00000345451 NACADO15069 1562 aa33.95■■■■□ 3.03
CPEB2-202ENST00000345451 SCRIBQ14160 1630 aa33.63■■■□□ 2.97
CPEB2-202ENST00000345451 RB1CC1Q8TDY2 1594 aa33.54■■■□□ 2.96
CPEB2-202ENST00000345451 SUPT5HO00267 1087 aaKnown RBP33.43■■■□□ 2.94
CPEB2-202ENST00000345451 UNC13AQ9UPW8 1703 aa32.9■■■□□ 2.86
CPEB2-202ENST00000345451 RSF1Q96T23 1441 aaPredicted RBP32.83■■■□□ 2.85
CPEB2-202ENST00000345451 CECR2Q9BXF3 1484 aa32.63■■■□□ 2.81
CPEB2-202ENST00000345451 MROH2BQ7Z745 1585 aa32.53■■■□□ 2.8
CPEB2-202ENST00000345451 BAZ1AQ9NRL2 1556 aaPredicted RBP32.53■■■□□ 2.8
CPEB2-202ENST00000345451 BICRAQ9NZM4 1560 aa32.5■■■□□ 2.79
CPEB2-202ENST00000345451 SMARCA4P51532 1647 aa32.32■■■□□ 2.76
CPEB2-202ENST00000345451 CHIC1Q5VXU3 224 aa32.31■■■□□ 2.76
CPEB2-202ENST00000345451 WIZO95785 1651 aa32.31■■■□□ 2.76
CPEB2-202ENST00000345451 PABPN1Q86U42 306 aaKnown RBP eCLIP32.1■■■□□ 2.73
CPEB2-202ENST00000345451 TOP2AP11388 1531 aaKnown RBP32.04■■■□□ 2.72
CPEB2-202ENST00000345451 PEG3Q9GZU2 1588 aa31.95■■■□□ 2.71
CPEB2-202ENST00000345451 SMARCA2P51531 1590 aa31.73■■■□□ 2.67
CPEB2-202ENST00000345451 EIF4G1Q04637 1599 aaKnown RBP31.72■■■□□ 2.67
CPEB2-202ENST00000345451 CCDC88BA6NC98 1476 aa31.64■■■□□ 2.66
CPEB2-202ENST00000345451 ATAD2BQ9ULI0 1458 aa31.63■■■□□ 2.65
CPEB2-202ENST00000345451 BAZ1BQ9UIG0 1483 aaKnown RBP31.49■■■□□ 2.63
CPEB2-202ENST00000345451 TRIM41Q8WV44 630 aa31.46■■■□□ 2.63
CPEB2-202ENST00000345451 HMGXB3Q12766 1538 aa31.36■■■□□ 2.61
CPEB2-202ENST00000345451 NCAPD3P42695 1498 aa31.29■■■□□ 2.6
CPEB2-202ENST00000345451 ABCC8Q09428 1581 aa31.12■■■□□ 2.57
CPEB2-202ENST00000345451 LOC105371045A0A1W2PR82 267 aa31■■■□□ 2.55
CPEB2-202ENST00000345451 WRNQ14191 1432 aaPredicted RBP eCLIP30.9■■■□□ 2.54
CPEB2-202ENST00000345451 CC2D2AQ9P2K1 1620 aa30.88■■■□□ 2.53
CPEB2-202ENST00000345451 FAM9AQ8IZU1 332 aaPredicted RBP30.81■■■□□ 2.52
CPEB2-202ENST00000345451 SYNJ1O43426 1573 aa30.77■■■□□ 2.52
CPEB2-202ENST00000345451 EEA1Q15075 1411 aa30.77■■■□□ 2.52
CPEB2-202ENST00000345451 CFTRP13569 1480 aa30.73■■■□□ 2.51
CPEB2-202ENST00000345451 PRDM2Q13029 1718 aa30.72■■■□□ 2.51
CPEB2-202ENST00000345451 TOP2BQ02880 1626 aa30.65■■■□□ 2.5
CPEB2-202ENST00000345451 BIVM-ERCC5R4GMW8 1640 aa30.64■■■□□ 2.5
CPEB2-202ENST00000345451 SOGA1O94964 1423 aa30.6■■■□□ 2.49
CPEB2-202ENST00000345451 CADPSQ9ULU8 1353 aa30.49■■■□□ 2.47
CPEB2-202ENST00000345451 RUSC2Q8N2Y8 1516 aa30.45■■■□□ 2.46
CPEB2-202ENST00000345451 CSRNP3Q8WYN3 585 aa30.42■■■□□ 2.46
CPEB2-202ENST00000345451 CUX1P39880 1505 aa30.41■■■□□ 2.46
CPEB2-202ENST00000345451 KIF21BO75037 1637 aa30.36■■■□□ 2.45
CPEB2-202ENST00000345451 DNAJC5BQ9UF47 199 aa30.35■■■□□ 2.45
CPEB2-202ENST00000345451 GOLGA3Q08378 1498 aa30.33■■■□□ 2.45
CPEB2-202ENST00000345451 TNIKQ9UKE5 1360 aa30.3■■■□□ 2.44
CPEB2-202ENST00000345451 CEP164Q9UPV0 1460 aa30.29■■■□□ 2.44
CPEB2-202ENST00000345451 EHMT2Q96KQ7 1210 aa30.29■■■□□ 2.44
CPEB2-202ENST00000345451 LAMC3Q9Y6N6 1575 aa30.2■■■□□ 2.43
CPEB2-202ENST00000345451 FANCD2Q9BXW9 1451 aa30.17■■■□□ 2.42
CPEB2-202ENST00000345451 CEP162Q5TB80 1403 aa30.16■■■□□ 2.42
CPEB2-202ENST00000345451 PCGF6Q9BYE7 350 aa30.1■■■□□ 2.41
CPEB2-202ENST00000345451 KIF27Q86VH2 1401 aa30.08■■■□□ 2.41
CPEB2-202ENST00000345451 ERICH3Q5RHP9 1530 aa30.07■■■□□ 2.4
CPEB2-202ENST00000345451 TRIM26Q12899 539 aaPredicted RBP30.07■■■□□ 2.4
CPEB2-202ENST00000345451 DNMBPQ6XZF7 1577 aa30.04■■■□□ 2.4
CPEB2-202ENST00000345451 NESP48681 1621 aa30.03■■■□□ 2.4
CPEB2-202ENST00000345451 UBTFP17480 764 aaKnown RBP30.03■■■□□ 2.4
CPEB2-202ENST00000345451 PRXQ9BXM0 1461 aa30.01■■■□□ 2.39
CPEB2-202ENST00000345451 FGD5Q6ZNL6 1462 aa29.99■■■□□ 2.39
CPEB2-202ENST00000345451 RAPGEF2Q9Y4G8 1499 aa29.99■■■□□ 2.39
CPEB2-202ENST00000345451 TOPBP1Q92547 1522 aa29.91■■■□□ 2.38
CPEB2-202ENST00000345451 PDS5BQ9NTI5 1447 aa29.89■■■□□ 2.38
CPEB2-202ENST00000345451 CUX2O14529 1486 aa29.87■■■□□ 2.37
CPEB2-202ENST00000345451 CLIP1P30622 1438 aa29.81■■■□□ 2.36
CPEB2-202ENST00000345451 POLA1P09884 1462 aaPredicted RBP29.79■■■□□ 2.36
CPEB2-202ENST00000345451 ABCA10Q8WWZ4 1543 aa29.78■■■□□ 2.36
CPEB2-202ENST00000345451 URB2Q14146 1524 aaKnown RBP29.76■■■□□ 2.36
CPEB2-202ENST00000345451 KIF21AQ7Z4S6 1674 aa29.76■■■□□ 2.36
CPEB2-202ENST00000345451 IGF1RP08069 1367 aa29.71■■■□□ 2.35
CPEB2-202ENST00000345451 WDR97A6NE52 1622 aa29.71■■■□□ 2.35
CPEB2-202ENST00000345451 HRCP23327 699 aa29.69■■■□□ 2.34
CPEB2-202ENST00000345451 VPS8Q8N3P4 1428 aa29.65■■■□□ 2.34
CPEB2-202ENST00000345451 RAD54L2Q9Y4B4 1467 aa29.64■■■□□ 2.34
CPEB2-202ENST00000345451 CUL7Q14999 1698 aa29.59■■■□□ 2.33
CPEB2-202ENST00000345451 CARMIL1Q5VZK9 1371 aa29.58■■■□□ 2.33
CPEB2-202ENST00000345451 ABCA5Q8WWZ7 1642 aa29.53■■■□□ 2.32
CPEB2-202ENST00000345451 MRC2Q9UBG0 1479 aa29.5■■■□□ 2.31
CPEB2-202ENST00000345451 ARAP1Q96P48 1450 aa29.49■■■□□ 2.31
CPEB2-202ENST00000345451 PPARGC1BQ86YN6 1023 aaKnown RBP29.46■■■□□ 2.31
CPEB2-202ENST00000345451 TARBP1Q13395 1621 aaKnown RBP29.46■■■□□ 2.31
CPEB2-202ENST00000345451 ARHGAP35Q9NRY4 1499 aa29.39■■■□□ 2.3
CPEB2-202ENST00000345451 GAPVD1Q14C86 1478 aa29.37■■■□□ 2.29
CPEB2-202ENST00000345451 WDR62O43379 1518 aa29.36■■■□□ 2.29
CPEB2-202ENST00000345451 CTTNBP2Q8WZ74 1663 aa29.32■■■□□ 2.28
CPEB2-202ENST00000345451 RANGAP1P46060 587 aaPredicted RBP29.3■■■□□ 2.28
CPEB2-202ENST00000345451 TDRD9Q8NDG6 1382 aaKnown RBP29.28■■■□□ 2.28
CPEB2-202ENST00000345451 APLP2Q06481 763 aa29.28■■■□□ 2.28
CPEB2-202ENST00000345451 PBRM1Q86U86 1689 aa29.25■■■□□ 2.27
CPEB2-202ENST00000345451 EFCAB5A4FU69 1503 aa29.23■■■□□ 2.27
CPEB2-202ENST00000345451 IFT140Q96RY7 1462 aa29.22■■■□□ 2.27
CPEB2-202ENST00000345451 THOC2Q8NI27 1593 aaKnown RBP29.17■■■□□ 2.26
CPEB2-202ENST00000345451 ZEB1P37275 1124 aaPredicted RBP29.16■■■□□ 2.26
CPEB2-202ENST00000345451 ERCC6Q03468 1493 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms