RNA–Protein interactions for RNA: ENST00000392662.5

ACTL6A-201, Transcript of actin like 6A, humanhuman

TSL 2 BASIC

Gene ACTL6A, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTL6A-201ENST00000392662 NISCHQ9Y2I1 1504 aa44.12■■■■■ 4.65
ACTL6A-201ENST00000392662 CCDC180Q9P1Z9 1646 aa38.4■■■■□ 3.74
ACTL6A-201ENST00000392662 ZCCHC6Q5VYS8 1495 aaKnown RBP37.05■■■■□ 3.52
ACTL6A-201ENST00000392662 DCAF8L2P0C7V8 631 aa36.5■■■■□ 3.43
ACTL6A-201ENST00000392662 DCAF1Q9Y4B6 1507 aa36.48■■■■□ 3.43
ACTL6A-201ENST00000392662 ABCC9O60706 1549 aa36.42■■■■□ 3.42
ACTL6A-201ENST00000392662 MYO15BQ96JP2 1530 aa36.06■■■■□ 3.36
ACTL6A-201ENST00000392662 SHROOM4Q9ULL8 1493 aa36■■■■□ 3.35
ACTL6A-201ENST00000392662 NACADO15069 1562 aa35.83■■■■□ 3.33
ACTL6A-201ENST00000392662 RB1CC1Q8TDY2 1594 aa35.51■■■■□ 3.27
ACTL6A-201ENST00000392662 SCRIBQ14160 1630 aa35.35■■■■□ 3.25
ACTL6A-201ENST00000392662 UNC13AQ9UPW8 1703 aa34.74■■■■□ 3.15
ACTL6A-201ENST00000392662 SUPT5HO00267 1087 aaKnown RBP34.65■■■■□ 3.14
ACTL6A-201ENST00000392662 BICRAQ9NZM4 1560 aa34.47■■■■□ 3.11
ACTL6A-201ENST00000392662 PABPN1Q86U42 306 aaKnown RBP eCLIP34.39■■■■□ 3.1
ACTL6A-201ENST00000392662 CECR2Q9BXF3 1484 aa34.32■■■■□ 3.08
ACTL6A-201ENST00000392662 RSF1Q96T23 1441 aaPredicted RBP34.25■■■■□ 3.07
ACTL6A-201ENST00000392662 MROH2BQ7Z745 1585 aa34.1■■■■□ 3.05
ACTL6A-201ENST00000392662 BAZ1AQ9NRL2 1556 aaPredicted RBP34.05■■■■□ 3.04
ACTL6A-201ENST00000392662 SMARCA4P51532 1647 aa33.89■■■■□ 3.02
ACTL6A-201ENST00000392662 WIZO95785 1651 aa33.78■■■■□ 3
ACTL6A-201ENST00000392662 PEG3Q9GZU2 1588 aa33.5■■■□□ 2.95
ACTL6A-201ENST00000392662 TOP2AP11388 1531 aaKnown RBP33.43■■■□□ 2.94
ACTL6A-201ENST00000392662 EIF4G1Q04637 1599 aaKnown RBP33.42■■■□□ 2.94
ACTL6A-201ENST00000392662 ATAD2BQ9ULI0 1458 aa33.39■■■□□ 2.94
ACTL6A-201ENST00000392662 SMARCA2P51531 1590 aa33.33■■■□□ 2.93
ACTL6A-201ENST00000392662 BAZ1BQ9UIG0 1483 aaKnown RBP33.18■■■□□ 2.9
ACTL6A-201ENST00000392662 CHIC1Q5VXU3 224 aa33.17■■■□□ 2.9
ACTL6A-201ENST00000392662 CCDC88BA6NC98 1476 aa33.14■■■□□ 2.9
ACTL6A-201ENST00000392662 NCAPD3P42695 1498 aa33.12■■■□□ 2.89
ACTL6A-201ENST00000392662 HMGXB3Q12766 1538 aa33.01■■■□□ 2.88
ACTL6A-201ENST00000392662 CC2D2AQ9P2K1 1620 aa32.93■■■□□ 2.86
ACTL6A-201ENST00000392662 TRIM41Q8WV44 630 aa32.58■■■□□ 2.81
ACTL6A-201ENST00000392662 ABCC8Q09428 1581 aa32.4■■■□□ 2.78
ACTL6A-201ENST00000392662 CFTRP13569 1480 aa32.37■■■□□ 2.77
ACTL6A-201ENST00000392662 CADPSQ9ULU8 1353 aa32.27■■■□□ 2.76
ACTL6A-201ENST00000392662 WRNQ14191 1432 aaPredicted RBP eCLIP32.22■■■□□ 2.75
ACTL6A-201ENST00000392662 DNAJC5BQ9UF47 199 aa32.21■■■□□ 2.75
ACTL6A-201ENST00000392662 PRDM2Q13029 1718 aa32.06■■■□□ 2.72
ACTL6A-201ENST00000392662 SYNJ1O43426 1573 aa32.06■■■□□ 2.72
ACTL6A-201ENST00000392662 FAM9AQ8IZU1 332 aaPredicted RBP31.98■■■□□ 2.71
ACTL6A-201ENST00000392662 NESP48681 1621 aa31.98■■■□□ 2.71
ACTL6A-201ENST00000392662 LAMC3Q9Y6N6 1575 aa31.94■■■□□ 2.7
ACTL6A-201ENST00000392662 TOP2BQ02880 1626 aa31.93■■■□□ 2.7
ACTL6A-201ENST00000392662 LOC105371045A0A1W2PR82 267 aa31.91■■■□□ 2.7
ACTL6A-201ENST00000392662 FANCD2Q9BXW9 1451 aa31.89■■■□□ 2.7
ACTL6A-201ENST00000392662 CUX1P39880 1505 aa31.87■■■□□ 2.69
ACTL6A-201ENST00000392662 BIVM-ERCC5R4GMW8 1640 aa31.87■■■□□ 2.69
ACTL6A-201ENST00000392662 SOGA1O94964 1423 aa31.83■■■□□ 2.69
ACTL6A-201ENST00000392662 EEA1Q15075 1411 aa31.74■■■□□ 2.67
ACTL6A-201ENST00000392662 PDS5BQ9NTI5 1447 aa31.74■■■□□ 2.67
ACTL6A-201ENST00000392662 RUSC2Q8N2Y8 1516 aa31.71■■■□□ 2.67
ACTL6A-201ENST00000392662 CEP164Q9UPV0 1460 aa31.67■■■□□ 2.66
ACTL6A-201ENST00000392662 CSRNP3Q8WYN3 585 aa31.62■■■□□ 2.65
ACTL6A-201ENST00000392662 DNMBPQ6XZF7 1577 aa31.56■■■□□ 2.64
ACTL6A-201ENST00000392662 TOPBP1Q92547 1522 aa31.54■■■□□ 2.64
ACTL6A-201ENST00000392662 EHMT2Q96KQ7 1210 aa31.52■■■□□ 2.64
ACTL6A-201ENST00000392662 FGD5Q6ZNL6 1462 aa31.52■■■□□ 2.64
ACTL6A-201ENST00000392662 KIF21AQ7Z4S6 1674 aa31.51■■■□□ 2.63
ACTL6A-201ENST00000392662 URB2Q14146 1524 aaKnown RBP31.49■■■□□ 2.63
ACTL6A-201ENST00000392662 KIF27Q86VH2 1401 aa31.41■■■□□ 2.62
ACTL6A-201ENST00000392662 POLA1P09884 1462 aaPredicted RBP31.39■■■□□ 2.62
ACTL6A-201ENST00000392662 CUX2O14529 1486 aa31.32■■■□□ 2.6
ACTL6A-201ENST00000392662 MRC2Q9UBG0 1479 aa31.3■■■□□ 2.6
ACTL6A-201ENST00000392662 RAD54L2Q9Y4B4 1467 aa31.29■■■□□ 2.6
ACTL6A-201ENST00000392662 KIF21BO75037 1637 aa31.29■■■□□ 2.6
ACTL6A-201ENST00000392662 GOLGA3Q08378 1498 aa31.29■■■□□ 2.6
ACTL6A-201ENST00000392662 ABCA10Q8WWZ4 1543 aa31.26■■■□□ 2.59
ACTL6A-201ENST00000392662 TNIKQ9UKE5 1360 aa31.22■■■□□ 2.59
ACTL6A-201ENST00000392662 ERCC6Q03468 1493 aa31.21■■■□□ 2.59
ACTL6A-201ENST00000392662 PRXQ9BXM0 1461 aa31.21■■■□□ 2.59
ACTL6A-201ENST00000392662 UBTFP17480 764 aaKnown RBP31.19■■■□□ 2.58
ACTL6A-201ENST00000392662 RAPGEF2Q9Y4G8 1499 aa31.18■■■□□ 2.58
ACTL6A-201ENST00000392662 IGF1RP08069 1367 aa31.17■■■□□ 2.58
ACTL6A-201ENST00000392662 WDR62O43379 1518 aa31.13■■■□□ 2.57
ACTL6A-201ENST00000392662 ERICH3Q5RHP9 1530 aa31.1■■■□□ 2.57
ACTL6A-201ENST00000392662 WDR97A6NE52 1622 aa31.08■■■□□ 2.57
ACTL6A-201ENST00000392662 TARBP1Q13395 1621 aaKnown RBP31.05■■■□□ 2.56
ACTL6A-201ENST00000392662 CEP162Q5TB80 1403 aa31.04■■■□□ 2.56
ACTL6A-201ENST00000392662 THOC2Q8NI27 1593 aaKnown RBP31.02■■■□□ 2.56
ACTL6A-201ENST00000392662 TDRD9Q8NDG6 1382 aaKnown RBP31.02■■■□□ 2.56
ACTL6A-201ENST00000392662 CARMIL1Q5VZK9 1371 aa31■■■□□ 2.55
ACTL6A-201ENST00000392662 ABCA5Q8WWZ7 1642 aa30.97■■■□□ 2.55
ACTL6A-201ENST00000392662 GAPVD1Q14C86 1478 aa30.94■■■□□ 2.54
ACTL6A-201ENST00000392662 IFT140Q96RY7 1462 aa30.93■■■□□ 2.54
ACTL6A-201ENST00000392662 CUL7Q14999 1698 aa30.83■■■□□ 2.53
ACTL6A-201ENST00000392662 AQRO60306 1485 aaKnown RBP eCLIP30.82■■■□□ 2.522e-6■■■■■ 30.5
ACTL6A-201ENST00000392662 CLIP1P30622 1438 aa30.81■■■□□ 2.52
ACTL6A-201ENST00000392662 ZNF608Q9ULD9 1512 aaPredicted RBP30.78■■■□□ 2.52
ACTL6A-201ENST00000392662 GRIN2BQ13224 1484 aa30.7■■■□□ 2.51
ACTL6A-201ENST00000392662 RANGAP1P46060 587 aaPredicted RBP30.7■■■□□ 2.5
ACTL6A-201ENST00000392662 PBRM1Q86U86 1689 aa30.68■■■□□ 2.5
ACTL6A-201ENST00000392662 FHAD1B1AJZ9 1412 aa30.62■■■□□ 2.49
ACTL6A-201ENST00000392662 EIF4G3O43432 1585 aaKnown RBP30.61■■■□□ 2.49
ACTL6A-201ENST00000392662 ADAMTS12P58397 1594 aa30.56■■■□□ 2.48
ACTL6A-201ENST00000392662 VPS8Q8N3P4 1428 aa30.53■■■□□ 2.48
ACTL6A-201ENST00000392662 ARHGAP35Q9NRY4 1499 aa30.51■■■□□ 2.48
ACTL6A-201ENST00000392662 ARAP1Q96P48 1450 aa30.51■■■□□ 2.47
ACTL6A-201ENST00000392662 SNAPC4Q5SXM2 1469 aa30.49■■■□□ 2.47
ACTL6A-201ENST00000392662 CTTNBP2Q8WZ74 1663 aa30.45■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms