Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.12■□□□□ 0.496e-8■■■■□ 19.7
RPS3P23396 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.046e-8■■■■□ 19.7
RPS3P23396 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.126e-8■■■■□ 19.7
RPS3P23396 ECE1-202ENST00000357071 3763 ntTSL 1 (best) BASIC10.41□□□□□ -0.746e-8■■■■□ 19.7
RPS3P23396 VCL-202ENST00000372755 6489 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.645e-7■■■■□ 19.7
RPS3P23396 VCL-201ENST00000211998 5490 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.755e-7■■■■□ 19.7
RPS3P23396 VCL-206ENST00000623461 7995 ntTSL 1 (best)8.79□□□□□ -15e-7■■■■□ 19.7
RPS3P23396 VCL-207ENST00000624354 3307 ntTSL 28.45□□□□□ -1.064e-7■■■■□ 19.7
RPS3P23396 HIST1H2BN-201ENST00000396980 432 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.483e-12■■■■□ 19.7
RPS3P23396 SUCLG1-203ENST00000442240 568 ntTSL 511.88□□□□□ -0.516e-12■■■■□ 19.7
RPS3P23396 SUCLG1-204ENST00000483605 655 ntTSL 311.58□□□□□ -0.566e-12■■■■□ 19.7
RPS3P23396 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.37e-7■■■■□ 19.7
RPS3P23396 DCAF7-203ENST00000580091 325 ntTSL 39.1□□□□□ -0.953e-11■■■■□ 19.7
RPS3P23396 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.461e-11■■■■□ 19.7
RPS3P23396 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.051e-11■■■■□ 19.7
RPS3P23396 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.161e-11■■■■□ 19.7
RPS3P23396 DDOST-204ENST00000475210 328 ntTSL 29.29□□□□□ -0.922e-12■■■■□ 19.6
RPS3P23396 CTSH-212ENST00000530929 479 ntTSL 34.77□□□□□ -1.657e-9■■■■□ 19.6
RPS3P23396 CTSB-211ENST00000526481 660 ntTSL 514.32□□□□□ -0.125e-22■■■■□ 19.6
RPS3P23396 ELP2-206ENST00000535093 582 ntTSL 44.09□□□□□ -1.754e-11■■■■□ 19.6
RPS3P23396 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.57□□□□□ -26e-21■■■■□ 19.6
RPS3P23396 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.935e-8■■■■□ 19.6
RPS3P23396 ATP6AP1-207ENST00000455205 4515 ntTSL 214.57□□□□□ -0.085e-8■■■■□ 19.6
RPS3P23396 P4HB-214ENST00000570907 353 ntTSL 36□□□□□ -1.458e-21■■■■□ 19.6
RPS3P23396 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.793e-7■■■■□ 19.6
RPS3P23396 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.54e-8■■■■□ 19.6
RPS3P23396 PRPF39-202ENST00000424478 3174 ntTSL 213.2□□□□□ -0.34e-8■■■■□ 19.6
RPS3P23396 PRPF39-203ENST00000477626 3507 ntTSL 212.12□□□□□ -0.474e-8■■■■□ 19.6
RPS3P23396 PRPF39-207ENST00000554439 2982 ntTSL 52.42□□□□□ -2.024e-8■■■■□ 19.6
RPS3P23396 PRPF39-206ENST00000554429 2977 ntTSL 52.35□□□□□ -2.034e-8■■■■□ 19.6
RPS3P23396 PRPF39-205ENST00000554081 3223 ntTSL 52.31□□□□□ -2.044e-8■■■■□ 19.6
RPS3P23396 PRPF39-208ENST00000554785 2121 ntTSL 20.92□□□□□ -2.264e-8■■■■□ 19.6
RPS3P23396 SNORD127-201ENST00000458892 86 ntBASIC-2.12□□□□□ -2.754e-8■■■■□ 19.6
RPS3P23396 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.151e-6■■■■□ 19.6
RPS3P23396 TUBB3-209ENST00000555609 1855 ntTSL 315.95■□□□□ 0.141e-6■■■■□ 19.6
RPS3P23396 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.7■□□□□ 0.11e-6■■■■□ 19.6
RPS3P23396 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.251e-6■■■■□ 19.6
RPS3P23396 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC12.64□□□□□ -0.391e-6■■■■□ 19.6
RPS3P23396 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 12e-6■■■■□ 19.6
RPS3P23396 SPN-205ENST00000563039 1853 ntTSL 519.13■□□□□ 0.652e-6■■■■□ 19.6
RPS3P23396 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.092e-6■■■■□ 19.6
RPS3P23396 SEMA4C-205ENST00000474420 2625 ntTSL 218.28■□□□□ 0.527e-8■■■■□ 19.6
RPS3P23396 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.065e-8■■■■□ 19.6
RPS3P23396 SEMA4C-204ENST00000467747 3371 ntTSL 213.99□□□□□ -0.177e-8■■■■□ 19.6
RPS3P23396 SEMA4C-206ENST00000482925 3776 ntTSL 213.05□□□□□ -0.327e-8■■■■□ 19.6
RPS3P23396 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.644e-7■■■■□ 19.6
RPS3P23396 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.044e-7■■■■□ 19.6
RPS3P23396 PTTG1-204ENST00000519287 670 ntTSL 57.23□□□□□ -1.254e-7■■■■□ 19.6
RPS3P23396 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.35e-7■■■■□ 19.6
RPS3P23396 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.15■■□□□ 1.629e-7■■■■□ 19.6
RPS3P23396 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.03■□□□□ 0.89e-7■■■■□ 19.6
RPS3P23396 SMG8-203ENST00000578922 2178 ntBASIC19.95■□□□□ 0.789e-7■■■■□ 19.6
RPS3P23396 SMG8-204ENST00000580498 785 ntTSL 519.5■□□□□ 0.719e-7■■■■□ 19.6
RPS3P23396 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.79e-7■■■■□ 19.6
RPS3P23396 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.25■□□□□ 0.679e-7■■■■□ 19.6
RPS3P23396 ENTPD2-204ENST00000469106 868 ntTSL 519.03■□□□□ 0.649e-7■■■■□ 19.6
RPS3P23396 SLC35B1-209ENST00000507773 1320 ntTSL 518.94■□□□□ 0.629e-7■■■■□ 19.6
RPS3P23396 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.73■□□□□ 0.592e-7■■■■□ 19.6
RPS3P23396 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.559e-7■■■■□ 19.6
RPS3P23396 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.469e-7■■■■□ 19.6
RPS3P23396 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.239e-7■■■■□ 19.6
RPS3P23396 GNB2-208ENST00000431068 910 ntTSL 516.37■□□□□ 0.219e-9■■■■□ 19.6
RPS3P23396 PELP1-204ENST00000570571 902 ntTSL 316.15■□□□□ 0.189e-7■■■■□ 19.6
RPS3P23396 SERPING1-208ENST00000528996 956 ntTSL 315.82■□□□□ 0.129e-7■■■■□ 19.6
RPS3P23396 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.119e-7■■■■□ 19.6
RPS3P23396 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.039e-7■■■■□ 19.6
RPS3P23396 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.032e-7■■■■□ 19.6
RPS3P23396 LRP5-202ENST00000528714 534 ntTSL 314.52□□□□□ -0.099e-7■■■■□ 19.6
RPS3P23396 SLC35B1-204ENST00000502406 1477 ntTSL 214.46□□□□□ -0.099e-7■■■■□ 19.6
RPS3P23396 ACADVL-207ENST00000577433 803 ntTSL 214.39□□□□□ -0.119e-7■■■■□ 19.6
RPS3P23396 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.129e-7■■■■□ 19.6
RPS3P23396 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.129e-7■■■■□ 19.6
RPS3P23396 GNB2-210ENST00000451587 887 ntTSL 514.18□□□□□ -0.149e-9■■■■□ 19.6
RPS3P23396 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.149e-7■■■■□ 19.6
RPS3P23396 MANBA-206ENST00000511813 628 ntTSL 413.89□□□□□ -0.199e-7■■■■□ 19.6
RPS3P23396 MANBA-204ENST00000507358 582 ntTSL 313.39□□□□□ -0.279e-7■■■■□ 19.6
RPS3P23396 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC13.36□□□□□ -0.279e-7■■■■□ 19.6
RPS3P23396 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.289e-7■■■■□ 19.6
RPS3P23396 SERPING1-213ENST00000619430 634 ntTSL 1 (best) BASIC12.67□□□□□ -0.389e-7■■■■□ 19.6
RPS3P23396 SLC35B1-205ENST00000503334 943 ntTSL 312.59□□□□□ -0.399e-7■■■■□ 19.6
RPS3P23396 SLC35B1-212ENST00000508749 464 ntTSL 212.51□□□□□ -0.419e-7■■■■□ 19.6
RPS3P23396 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.449e-7■■■■□ 19.6
RPS3P23396 SLC35B1-206ENST00000504260 2424 ntTSL 212.25□□□□□ -0.459e-7■■■■□ 19.6
RPS3P23396 F2R-201ENST00000319211 3821 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.489e-7■■■■□ 19.6
RPS3P23396 ABCB6-211ENST00000494639 552 ntTSL 211.94□□□□□ -0.59e-7■■■■□ 19.6
RPS3P23396 SERPING1-209ENST00000530113 908 ntTSL 211.57□□□□□ -0.569e-7■■■■□ 19.6
RPS3P23396 HPX-207ENST00000529775 803 ntTSL 211.41□□□□□ -0.589e-7■■■■□ 19.6
RPS3P23396 SLC35B1-208ENST00000507477 2487 ntTSL 210.72□□□□□ -0.699e-7■■■■□ 19.6
RPS3P23396 PELP1-210ENST00000573506 415 ntTSL 210.27□□□□□ -0.779e-7■■■■□ 19.6
RPS3P23396 SERPING1-212ENST00000531797 907 ntTSL 1 (best)9.32□□□□□ -0.929e-7■■■■□ 19.6
RPS3P23396 SLC13A5-209ENST00000574580 5398 nt9.28□□□□□ -0.929e-7■■■■□ 19.6
RPS3P23396 CEMIP-204ENST00000495041 385 ntTSL 59.04□□□□□ -0.969e-7■■■■□ 19.6
RPS3P23396 SERPING1-210ENST00000531133 1004 ntTSL 1 (best)8.67□□□□□ -1.029e-7■■■■□ 19.6
RPS3P23396 PIGU-203ENST00000438215 509 ntTSL 38.38□□□□□ -1.072e-12■■■■□ 19.6
RPS3P23396 SERINC5-205ENST00000513907 547 ntTSL 46.91□□□□□ -1.39e-7■■■■□ 19.6
RPS3P23396 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.499e-7■■■■□ 19.6
RPS3P23396 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.225e-7■■■■□ 19.6
RPS3P23396 LAMP2-201ENST00000200639 1867 ntAPPRIS P5 TSL 1 (best) BASIC13.13□□□□□ -0.315e-7■■■■□ 19.6
RPS3P23396 PPIB-202ENST00000558492 381 ntTSL 39.68□□□□□ -0.866e-14■■■■□ 19.6
RPS3P23396 SEC13-211ENST00000431352 832 ntTSL 513.27□□□□□ -0.293e-22■■■■□ 19.6
Retrieved 100 of 24,271 protein–RNA pairs in 251.3 ms