RNA–Protein interactions for RNA: ENST00000292614.9

POLR2J-201, Transcript of RNA polymerase II subunit J, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2J, Length 932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J-201ENST00000292614 NISCHQ9Y2I1 1504 aa37.31■■■■□ 3.56
POLR2J-201ENST00000292614 ABCC9O60706 1549 aa33.3■■■□□ 2.92
POLR2J-201ENST00000292614 CCDC180Q9P1Z9 1646 aa33.1■■■□□ 2.89
POLR2J-201ENST00000292614 DNAJC5BQ9UF47 199 aa31.92■■■□□ 2.7
POLR2J-201ENST00000292614 RB1CC1Q8TDY2 1594 aa31.29■■■□□ 2.6
POLR2J-201ENST00000292614 ZCCHC6Q5VYS8 1495 aaKnown RBP31.22■■■□□ 2.59
POLR2J-201ENST00000292614 PABPN1Q86U42 306 aaKnown RBP eCLIP30.98■■■□□ 2.55
POLR2J-201ENST00000292614 NACADO15069 1562 aa30.91■■■□□ 2.54
POLR2J-201ENST00000292614 DCAF8L2P0C7V8 631 aa30.89■■■□□ 2.54
POLR2J-201ENST00000292614 DCAF1Q9Y4B6 1507 aa30.88■■■□□ 2.53
POLR2J-201ENST00000292614 MYO15BQ96JP2 1530 aa30.83■■■□□ 2.53
POLR2J-201ENST00000292614 UNC13AQ9UPW8 1703 aa30.54■■■□□ 2.48
POLR2J-201ENST00000292614 BICRAQ9NZM4 1560 aa30.37■■■□□ 2.45
POLR2J-201ENST00000292614 SCRIBQ14160 1630 aa30.25■■■□□ 2.43
POLR2J-201ENST00000292614 CECR2Q9BXF3 1484 aa30.05■■■□□ 2.4
POLR2J-201ENST00000292614 CC2D2AQ9P2K1 1620 aa29.98■■■□□ 2.39
POLR2J-201ENST00000292614 DNAJC5Q9H3Z4 198 aa29.83■■■□□ 2.37
POLR2J-201ENST00000292614 SHROOM4Q9ULL8 1493 aa29.8■■■□□ 2.36
POLR2J-201ENST00000292614 EIF4G1Q04637 1599 aaKnown RBP29.71■■■□□ 2.35
POLR2J-201ENST00000292614 SMARCA4P51532 1647 aa28.95■■■□□ 2.23
POLR2J-201ENST00000292614 CUX2O14529 1486 aa28.91■■■□□ 2.22
POLR2J-201ENST00000292614 BAZ1AQ9NRL2 1556 aaPredicted RBP28.88■■■□□ 2.21
POLR2J-201ENST00000292614 ERCC6Q03468 1493 aa28.83■■■□□ 2.21
POLR2J-201ENST00000292614 MROH2BQ7Z745 1585 aa28.82■■■□□ 2.2
POLR2J-201ENST00000292614 PEG3Q9GZU2 1588 aa28.63■■■□□ 2.17
POLR2J-201ENST00000292614 ATAD2BQ9ULI0 1458 aa28.6■■■□□ 2.17
POLR2J-201ENST00000292614 WIZO95785 1651 aa28.58■■■□□ 2.17
POLR2J-201ENST00000292614 SMARCA2P51531 1590 aa28.57■■■□□ 2.16
POLR2J-201ENST00000292614 RSF1Q96T23 1441 aaPredicted RBP28.55■■■□□ 2.16
POLR2J-201ENST00000292614 NCAPD3P42695 1498 aa28.52■■■□□ 2.16
POLR2J-201ENST00000292614 HMGXB3Q12766 1538 aa28.47■■■□□ 2.15
POLR2J-201ENST00000292614 NESP48681 1621 aa28.39■■■□□ 2.13
POLR2J-201ENST00000292614 BAZ1BQ9UIG0 1483 aaKnown RBP28.37■■■□□ 2.13
POLR2J-201ENST00000292614 TRIM41Q8WV44 630 aa28.35■■■□□ 2.13
POLR2J-201ENST00000292614 TOP2AP11388 1531 aaKnown RBP28.24■■■□□ 2.11
POLR2J-201ENST00000292614 THOC2Q8NI27 1593 aaKnown RBP28.13■■■□□ 2.09
POLR2J-201ENST00000292614 LAMC3Q9Y6N6 1575 aa27.99■■■□□ 2.07
POLR2J-201ENST00000292614 SUPT5HO00267 1087 aaKnown RBP27.97■■■□□ 2.07
POLR2J-201ENST00000292614 KIF21AQ7Z4S6 1674 aa27.94■■■□□ 2.06
POLR2J-201ENST00000292614 PDS5BQ9NTI5 1447 aa27.92■■■□□ 2.06
POLR2J-201ENST00000292614 CCDC88BA6NC98 1476 aa27.84■■■□□ 2.05
POLR2J-201ENST00000292614 MRC2Q9UBG0 1479 aa27.69■■■□□ 2.02
POLR2J-201ENST00000292614 CADPSQ9ULU8 1353 aa27.68■■■□□ 2.02
POLR2J-201ENST00000292614 PRDM2Q13029 1718 aa27.66■■■□□ 2.02
POLR2J-201ENST00000292614 CFTRP13569 1480 aa27.62■■■□□ 2.01
POLR2J-201ENST00000292614 OSCARQ8IYS5 282 aa27.61■■■□□ 2.01
POLR2J-201ENST00000292614 WDR62O43379 1518 aa27.59■■■□□ 2.01
POLR2J-201ENST00000292614 CEP164Q9UPV0 1460 aa27.44■■□□□ 1.98
POLR2J-201ENST00000292614 FANCD2Q9BXW9 1451 aa27.38■■□□□ 1.97
POLR2J-201ENST00000292614 RIMBP3CA6NJZ7 1639 aa27.23■■□□□ 1.95
POLR2J-201ENST00000292614 RIMBP3BA6NNM3 1639 aa27.23■■□□□ 1.95
POLR2J-201ENST00000292614 RIMBP3Q9UFD9 1639 aa27.23■■□□□ 1.95
POLR2J-201ENST00000292614 URB2Q14146 1524 aaKnown RBP27.16■■□□□ 1.94
POLR2J-201ENST00000292614 ARHGEF11O15085 1522 aa27.06■■□□□ 1.92
POLR2J-201ENST00000292614 DNMBPQ6XZF7 1577 aa27.06■■□□□ 1.92
POLR2J-201ENST00000292614 TRHP20396 242 aaPredicted RBP27.06■■□□□ 1.92
POLR2J-201ENST00000292614 CYB5RLQ6IPT4 315 aa27.06■■□□□ 1.92
POLR2J-201ENST00000292614 ABCC8Q09428 1581 aa27.05■■□□□ 1.92
POLR2J-201ENST00000292614 TOPBP1Q92547 1522 aa27.03■■□□□ 1.92
POLR2J-201ENST00000292614 CUX1P39880 1505 aa27.02■■□□□ 1.92
POLR2J-201ENST00000292614 ZNF608Q9ULD9 1512 aaPredicted RBP26.98■■□□□ 1.91
POLR2J-201ENST00000292614 SYNJ1O43426 1573 aa26.96■■□□□ 1.91
POLR2J-201ENST00000292614 BIVM-ERCC5R4GMW8 1640 aa26.93■■□□□ 1.9
POLR2J-201ENST00000292614 IFT140Q96RY7 1462 aa26.91■■□□□ 1.9
POLR2J-201ENST00000292614 TOP2BQ02880 1626 aa26.87■■□□□ 1.89
POLR2J-201ENST00000292614 WRNQ14191 1432 aaPredicted RBP eCLIP26.87■■□□□ 1.89
POLR2J-201ENST00000292614 POLA1P09884 1462 aaPredicted RBP26.83■■□□□ 1.89
POLR2J-201ENST00000292614 FGD5Q6ZNL6 1462 aa26.83■■□□□ 1.89
POLR2J-201ENST00000292614 AEBP2Q6ZN18 517 aaPredicted RBP26.81■■□□□ 1.88
POLR2J-201ENST00000292614 FBLN2P98095 1184 aa26.79■■□□□ 1.88
POLR2J-201ENST00000292614 TARBP1Q13395 1621 aaKnown RBP26.79■■□□□ 1.88
POLR2J-201ENST00000292614 WDR97A6NE52 1622 aa26.76■■□□□ 1.87
POLR2J-201ENST00000292614 ARAP1Q96P48 1450 aa26.74■■□□□ 1.87
POLR2J-201ENST00000292614 EIF4G3O43432 1585 aaKnown RBP26.73■■□□□ 1.87
POLR2J-201ENST00000292614 RAD54L2Q9Y4B4 1467 aa26.7■■□□□ 1.87
POLR2J-201ENST00000292614 CHD1O14646 1710 aa26.69■■□□□ 1.86
POLR2J-201ENST00000292614 AQRO60306 1485 aaKnown RBP eCLIP26.68■■□□□ 1.862e-6■□□□□ 9
POLR2J-201ENST00000292614 SOGA1O94964 1423 aa26.6■■□□□ 1.85
POLR2J-201ENST00000292614 ABCA10Q8WWZ4 1543 aa26.55■■□□□ 1.84
POLR2J-201ENST00000292614 ABCA5Q8WWZ7 1642 aa26.54■■□□□ 1.84
POLR2J-201ENST00000292614 PBRM1Q86U86 1689 aa26.48■■□□□ 1.83
POLR2J-201ENST00000292614 TDRD9Q8NDG6 1382 aaKnown RBP26.44■■□□□ 1.82
POLR2J-201ENST00000292614 CHMP7Q8WUX9 453 aaPredicted RBP26.41■■□□□ 1.82
POLR2J-201ENST00000292614 CHIC1Q5VXU3 224 aa26.37■■□□□ 1.81
POLR2J-201ENST00000292614 GAPVD1Q14C86 1478 aa26.36■■□□□ 1.81
POLR2J-201ENST00000292614 SNAPC4Q5SXM2 1469 aa26.34■■□□□ 1.81
POLR2J-201ENST00000292614 CLASP1Q7Z460 1538 aa26.32■■□□□ 1.8
POLR2J-201ENST00000292614 GRIN2BQ13224 1484 aa26.3■■□□□ 1.8
POLR2J-201ENST00000292614 RUSC2Q8N2Y8 1516 aa26.27■■□□□ 1.8
POLR2J-201ENST00000292614 ADAMTS12P58397 1594 aa26.24■■□□□ 1.79
POLR2J-201ENST00000292614 ERICH3Q5RHP9 1530 aa26.24■■□□□ 1.79
POLR2J-201ENST00000292614 KIF27Q86VH2 1401 aa26.22■■□□□ 1.79
POLR2J-201ENST00000292614 MAGI1Q96QZ7 1491 aaPredicted RBP26.2■■□□□ 1.78
POLR2J-201ENST00000292614 SYNJ2O15056 1496 aa26.14■■□□□ 1.78
POLR2J-201ENST00000292614 CUL7Q14999 1698 aa26.13■■□□□ 1.77
POLR2J-201ENST00000292614 IGF1RP08069 1367 aa26.07■■□□□ 1.76
POLR2J-201ENST00000292614 FHAD1B1AJZ9 1412 aa26.04■■□□□ 1.76
POLR2J-201ENST00000292614 GRIN2AQ12879 1464 aa26.01■■□□□ 1.75
POLR2J-201ENST00000292614 EEA1Q15075 1411 aa25.97■■□□□ 1.75
POLR2J-201ENST00000292614 CEP170Q5SW79 1584 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms