RNA–Protein interactions for RNA: ENST00000393794.4

POLR2J-202, Transcript of RNA polymerase II subunit J, humanhuman

TSL 1 (best) BASIC

Gene POLR2J, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J-202ENST00000393794 NISCHQ9Y2I1 1504 aa50.75■■■■■ 5.71
POLR2J-202ENST00000393794 ABCC9O60706 1549 aa46.08■■■■■ 4.97
POLR2J-202ENST00000393794 CCDC180Q9P1Z9 1646 aa45.71■■■■■ 4.91
POLR2J-202ENST00000393794 DNAJC5BQ9UF47 199 aa43.81■■■■■ 4.6
POLR2J-202ENST00000393794 RB1CC1Q8TDY2 1594 aa43.7■■■■■ 4.59
POLR2J-202ENST00000393794 NACADO15069 1562 aa43.35■■■■■ 4.53
POLR2J-202ENST00000393794 PABPN1Q86U42 306 aaKnown RBP eCLIP42.84■■■■■ 4.45
POLR2J-202ENST00000393794 DCAF8L2P0C7V8 631 aa42.79■■■■■ 4.44
POLR2J-202ENST00000393794 UNC13AQ9UPW8 1703 aa42.75■■■■■ 4.43
POLR2J-202ENST00000393794 MYO15BQ96JP2 1530 aa42.71■■■■■ 4.43
POLR2J-202ENST00000393794 BICRAQ9NZM4 1560 aa42.56■■■■■ 4.4
POLR2J-202ENST00000393794 DCAF1Q9Y4B6 1507 aa41.97■■■■■ 4.31
POLR2J-202ENST00000393794 ZCCHC6Q5VYS8 1495 aaKnown RBP41.97■■■■■ 4.31
POLR2J-202ENST00000393794 SHROOM4Q9ULL8 1493 aa41.93■■■■■ 4.3
POLR2J-202ENST00000393794 CC2D2AQ9P2K1 1620 aa41.66■■■■■ 4.26
POLR2J-202ENST00000393794 CECR2Q9BXF3 1484 aa41.6■■■■■ 4.25
POLR2J-202ENST00000393794 SCRIBQ14160 1630 aa41.51■■■■■ 4.23
POLR2J-202ENST00000393794 EIF4G1Q04637 1599 aaKnown RBP41.48■■■■■ 4.23
POLR2J-202ENST00000393794 DNAJC5Q9H3Z4 198 aa40.55■■■■■ 4.08
POLR2J-202ENST00000393794 NCAPD3P42695 1498 aa40.09■■■■■ 4.01
POLR2J-202ENST00000393794 CUX2O14529 1486 aa39.98■■■■□ 3.99
POLR2J-202ENST00000393794 ATAD2BQ9ULI0 1458 aa39.85■■■■□ 3.97
POLR2J-202ENST00000393794 ERCC6Q03468 1493 aa39.75■■■■□ 3.95
POLR2J-202ENST00000393794 HMGXB3Q12766 1538 aa39.69■■■■□ 3.94
POLR2J-202ENST00000393794 SMARCA2P51531 1590 aa39.66■■■■□ 3.94
POLR2J-202ENST00000393794 SMARCA4P51532 1647 aa39.65■■■■□ 3.94
POLR2J-202ENST00000393794 NESP48681 1621 aa39.51■■■■□ 3.91
POLR2J-202ENST00000393794 PEG3Q9GZU2 1588 aa39.38■■■■□ 3.89
POLR2J-202ENST00000393794 BAZ1AQ9NRL2 1556 aaPredicted RBP39.38■■■■□ 3.89
POLR2J-202ENST00000393794 BAZ1BQ9UIG0 1483 aaKnown RBP39.34■■■■□ 3.89
POLR2J-202ENST00000393794 THOC2Q8NI27 1593 aaKnown RBP39.22■■■■□ 3.87
POLR2J-202ENST00000393794 LAMC3Q9Y6N6 1575 aa39.16■■■■□ 3.86
POLR2J-202ENST00000393794 MROH2BQ7Z745 1585 aa39.08■■■■□ 3.85
POLR2J-202ENST00000393794 KIF21AQ7Z4S6 1674 aa38.94■■■■□ 3.82
POLR2J-202ENST00000393794 PDS5BQ9NTI5 1447 aa38.94■■■■□ 3.82
POLR2J-202ENST00000393794 CADPSQ9ULU8 1353 aa38.8■■■■□ 3.8
POLR2J-202ENST00000393794 MRC2Q9UBG0 1479 aa38.62■■■■□ 3.77
POLR2J-202ENST00000393794 WDR62O43379 1518 aa38.59■■■■□ 3.77
POLR2J-202ENST00000393794 WIZO95785 1651 aa38.54■■■■□ 3.76
POLR2J-202ENST00000393794 CEP164Q9UPV0 1460 aa38.35■■■■□ 3.73
POLR2J-202ENST00000393794 TRIM41Q8WV44 630 aa38.34■■■■□ 3.73
POLR2J-202ENST00000393794 FANCD2Q9BXW9 1451 aa38.29■■■■□ 3.72
POLR2J-202ENST00000393794 CFTRP13569 1480 aa38.28■■■■□ 3.72
POLR2J-202ENST00000393794 RSF1Q96T23 1441 aaPredicted RBP38.13■■■■□ 3.7
POLR2J-202ENST00000393794 URB2Q14146 1524 aaKnown RBP38.06■■■■□ 3.68
POLR2J-202ENST00000393794 OSCARQ8IYS5 282 aa38.05■■■■□ 3.68
POLR2J-202ENST00000393794 TOP2AP11388 1531 aaKnown RBP38.04■■■■□ 3.68
POLR2J-202ENST00000393794 PRDM2Q13029 1718 aa37.76■■■■□ 3.64
POLR2J-202ENST00000393794 ZNF608Q9ULD9 1512 aaPredicted RBP37.65■■■■□ 3.62
POLR2J-202ENST00000393794 CCDC88BA6NC98 1476 aa37.64■■■■□ 3.62
POLR2J-202ENST00000393794 IFT140Q96RY7 1462 aa37.64■■■■□ 3.62
POLR2J-202ENST00000393794 RIMBP3CA6NJZ7 1639 aa37.6■■■■□ 3.61
POLR2J-202ENST00000393794 RIMBP3BA6NNM3 1639 aa37.6■■■■□ 3.61
POLR2J-202ENST00000393794 RIMBP3Q9UFD9 1639 aa37.6■■■■□ 3.61
POLR2J-202ENST00000393794 TOPBP1Q92547 1522 aa37.54■■■■□ 3.6
POLR2J-202ENST00000393794 ARHGEF11O15085 1522 aa37.45■■■■□ 3.59
POLR2J-202ENST00000393794 ABCC8Q09428 1581 aa37.43■■■■□ 3.58
POLR2J-202ENST00000393794 EIF4G3O43432 1585 aaKnown RBP37.36■■■■□ 3.57
POLR2J-202ENST00000393794 DNMBPQ6XZF7 1577 aa37.34■■■■□ 3.57
POLR2J-202ENST00000393794 TARBP1Q13395 1621 aaKnown RBP37.28■■■■□ 3.56
POLR2J-202ENST00000393794 AQRO60306 1485 aaKnown RBP eCLIP37.22■■■■□ 3.55
POLR2J-202ENST00000393794 CHD1O14646 1710 aa37.16■■■■□ 3.54
POLR2J-202ENST00000393794 CYB5RLQ6IPT4 315 aa37.14■■■■□ 3.54
POLR2J-202ENST00000393794 POLA1P09884 1462 aaPredicted RBP37.13■■■■□ 3.54
POLR2J-202ENST00000393794 ARAP1Q96P48 1450 aa37.07■■■■□ 3.52
POLR2J-202ENST00000393794 RAD54L2Q9Y4B4 1467 aa36.98■■■■□ 3.51
POLR2J-202ENST00000393794 SOGA1O94964 1423 aa36.93■■■■□ 3.5
POLR2J-202ENST00000393794 FBLN2P98095 1184 aa36.92■■■■□ 3.5
POLR2J-202ENST00000393794 TDRD9Q8NDG6 1382 aaKnown RBP36.91■■■■□ 3.5
POLR2J-202ENST00000393794 WDR97A6NE52 1622 aa36.86■■■■□ 3.49
POLR2J-202ENST00000393794 CLASP1Q7Z460 1538 aa36.82■■■■□ 3.48
POLR2J-202ENST00000393794 SNAPC4Q5SXM2 1469 aa36.8■■■■□ 3.48
POLR2J-202ENST00000393794 FGD5Q6ZNL6 1462 aa36.8■■■■□ 3.48
POLR2J-202ENST00000393794 TRHP20396 242 aaPredicted RBP36.77■■■■□ 3.48
POLR2J-202ENST00000393794 CUX1P39880 1505 aa36.74■■■■□ 3.47
POLR2J-202ENST00000393794 MAGI1Q96QZ7 1491 aaPredicted RBP36.73■■■■□ 3.47
POLR2J-202ENST00000393794 GRIN2BQ13224 1484 aa36.67■■■■□ 3.46
POLR2J-202ENST00000393794 CHMP7Q8WUX9 453 aaPredicted RBP36.66■■■■□ 3.46
POLR2J-202ENST00000393794 SYNJ1O43426 1573 aa36.66■■■■□ 3.46
POLR2J-202ENST00000393794 SYNJ2O15056 1496 aa36.61■■■■□ 3.45
POLR2J-202ENST00000393794 GAPVD1Q14C86 1478 aa36.47■■■■□ 3.43
POLR2J-202ENST00000393794 PBRM1Q86U86 1689 aa36.44■■■■□ 3.42
POLR2J-202ENST00000393794 ABCA10Q8WWZ4 1543 aa36.42■■■■□ 3.42
POLR2J-202ENST00000393794 ABCA5Q8WWZ7 1642 aa36.38■■■■□ 3.41
POLR2J-202ENST00000393794 GRIN2AQ12879 1464 aa36.2■■■■□ 3.39
POLR2J-202ENST00000393794 ERCC6L2Q5T890 1561 aa36.18■■■■□ 3.38
POLR2J-202ENST00000393794 NUP160Q12769 1436 aa36.17■■■■□ 3.38
POLR2J-202ENST00000393794 WRNQ14191 1432 aaPredicted RBP eCLIP36.11■■■■□ 3.37
POLR2J-202ENST00000393794 ADAMTS12P58397 1594 aa36.1■■■■□ 3.37
POLR2J-202ENST00000393794 CEP170Q5SW79 1584 aa36.1■■■■□ 3.37
POLR2J-202ENST00000393794 SHROOM2Q13796 1616 aa36.05■■■■□ 3.36
POLR2J-202ENST00000393794 BIVM-ERCC5R4GMW8 1640 aa36.02■■■■□ 3.36
POLR2J-202ENST00000393794 TOP2BQ02880 1626 aa36.01■■■■□ 3.36
POLR2J-202ENST00000393794 FHAD1B1AJZ9 1412 aa36.01■■■■□ 3.36
POLR2J-202ENST00000393794 AEBP2Q6ZN18 517 aaPredicted RBP36■■■■□ 3.35
POLR2J-202ENST00000393794 ERICH3Q5RHP9 1530 aa35.93■■■■□ 3.34
POLR2J-202ENST00000393794 SUPT5HO00267 1087 aaKnown RBP35.89■■■■□ 3.34
POLR2J-202ENST00000393794 KIF13AQ9H1H9 1805 aa35.78■■■■□ 3.32
POLR2J-202ENST00000393794 PRG4Q92954 1404 aaPredicted RBP35.76■■■■□ 3.32
POLR2J-202ENST00000393794 JPH4Q96JJ6 628 aa35.74■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms