RNA–Protein interactions for RNA: ENST00000563039.2

SPN-205, Transcript of sialophorin, humanhuman

TSL 5

Gene SPN, Length 1,853 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPN-205ENST00000563039 NISCHQ9Y2I1 1504 aa45.02■■■■■ 4.8
SPN-205ENST00000563039 CCDC180Q9P1Z9 1646 aa39.39■■■■□ 3.9
SPN-205ENST00000563039 ABCC9O60706 1549 aa37.82■■■■□ 3.64
SPN-205ENST00000563039 ZCCHC6Q5VYS8 1495 aaKnown RBP37.71■■■■□ 3.63
SPN-205ENST00000563039 DCAF8L2P0C7V8 631 aa37.41■■■■□ 3.58
SPN-205ENST00000563039 DCAF1Q9Y4B6 1507 aa37.15■■■■□ 3.54
SPN-205ENST00000563039 MYO15BQ96JP2 1530 aa36.87■■■■□ 3.49
SPN-205ENST00000563039 NACADO15069 1562 aa36.82■■■■□ 3.48
SPN-205ENST00000563039 RB1CC1Q8TDY2 1594 aa36.61■■■■□ 3.45
SPN-205ENST00000563039 SHROOM4Q9ULL8 1493 aa36.48■■■■□ 3.43
SPN-205ENST00000563039 SCRIBQ14160 1630 aa36.26■■■■□ 3.4
SPN-205ENST00000563039 UNC13AQ9UPW8 1703 aa35.97■■■■□ 3.35
SPN-205ENST00000563039 BICRAQ9NZM4 1560 aa35.64■■■■□ 3.3
SPN-205ENST00000563039 PABPN1Q86U42 306 aaKnown RBP eCLIP35.63■■■■□ 3.29
SPN-205ENST00000563039 CECR2Q9BXF3 1484 aa35.11■■■■□ 3.21
SPN-205ENST00000563039 SUPT5HO00267 1087 aaKnown RBP34.84■■■■□ 3.17
SPN-205ENST00000563039 MROH2BQ7Z745 1585 aa34.82■■■■□ 3.16
SPN-205ENST00000563039 RSF1Q96T23 1441 aaPredicted RBP34.78■■■■□ 3.16
SPN-205ENST00000563039 BAZ1AQ9NRL2 1556 aaPredicted RBP34.74■■■■□ 3.15
SPN-205ENST00000563039 SMARCA4P51532 1647 aa34.7■■■■□ 3.14
SPN-205ENST00000563039 EIF4G1Q04637 1599 aaKnown RBP34.55■■■■□ 3.12
SPN-205ENST00000563039 WIZO95785 1651 aa34.5■■■■□ 3.11
SPN-205ENST00000563039 ATAD2BQ9ULI0 1458 aa34.27■■■■□ 3.08
SPN-205ENST00000563039 PEG3Q9GZU2 1588 aa34.27■■■■□ 3.08
SPN-205ENST00000563039 CC2D2AQ9P2K1 1620 aa34.18■■■■□ 3.06
SPN-205ENST00000563039 SMARCA2P51531 1590 aa34.16■■■■□ 3.06
SPN-205ENST00000563039 TOP2AP11388 1531 aaKnown RBP34.05■■■■□ 3.04
SPN-205ENST00000563039 NCAPD3P42695 1498 aa34.03■■■■□ 3.04
SPN-205ENST00000563039 BAZ1BQ9UIG0 1483 aaKnown RBP34■■■■□ 3.03
SPN-205ENST00000563039 DNAJC5BQ9UF47 199 aa33.93■■■■□ 3.02
SPN-205ENST00000563039 HMGXB3Q12766 1538 aa33.9■■■■□ 3.02
SPN-205ENST00000563039 CCDC88BA6NC98 1476 aa33.77■■■■□ 3
SPN-205ENST00000563039 CFTRP13569 1480 aa33.15■■■□□ 2.9
SPN-205ENST00000563039 CADPSQ9ULU8 1353 aa33.14■■■□□ 2.89
SPN-205ENST00000563039 CHIC1Q5VXU3 224 aa33.1■■■□□ 2.89
SPN-205ENST00000563039 NESP48681 1621 aa33.09■■■□□ 2.89
SPN-205ENST00000563039 ABCC8Q09428 1581 aa32.92■■■□□ 2.86
SPN-205ENST00000563039 LAMC3Q9Y6N6 1575 aa32.91■■■□□ 2.86
SPN-205ENST00000563039 PRDM2Q13029 1718 aa32.89■■■□□ 2.86
SPN-205ENST00000563039 FANCD2Q9BXW9 1451 aa32.77■■■□□ 2.84
SPN-205ENST00000563039 TRIM41Q8WV44 630 aa32.73■■■□□ 2.83
SPN-205ENST00000563039 WRNQ14191 1432 aaPredicted RBP eCLIP32.7■■■□□ 2.821e-6■□□□□ 9.9
SPN-205ENST00000563039 PDS5BQ9NTI5 1447 aa32.67■■■□□ 2.82
SPN-205ENST00000563039 SYNJ1O43426 1573 aa32.63■■■□□ 2.81
SPN-205ENST00000563039 KIF21AQ7Z4S6 1674 aa32.63■■■□□ 2.81
SPN-205ENST00000563039 CEP164Q9UPV0 1460 aa32.58■■■□□ 2.81
SPN-205ENST00000563039 CUX1P39880 1505 aa32.57■■■□□ 2.8
SPN-205ENST00000563039 TOP2BQ02880 1626 aa32.48■■■□□ 2.79
SPN-205ENST00000563039 BIVM-ERCC5R4GMW8 1640 aa32.44■■■□□ 2.78
SPN-205ENST00000563039 URB2Q14146 1524 aaKnown RBP32.43■■■□□ 2.78
SPN-205ENST00000563039 ERCC6Q03468 1493 aa32.39■■■□□ 2.78
SPN-205ENST00000563039 TOPBP1Q92547 1522 aa32.37■■■□□ 2.77
SPN-205ENST00000563039 DNMBPQ6XZF7 1577 aa32.35■■■□□ 2.77
SPN-205ENST00000563039 MRC2Q9UBG0 1479 aa32.3■■■□□ 2.76
SPN-205ENST00000563039 FGD5Q6ZNL6 1462 aa32.26■■■□□ 2.75
SPN-205ENST00000563039 SOGA1O94964 1423 aa32.22■■■□□ 2.75
SPN-205ENST00000563039 FAM9AQ8IZU1 332 aaPredicted RBP32.2■■■□□ 2.75
SPN-205ENST00000563039 THOC2Q8NI27 1593 aaKnown RBP32.2■■■□□ 2.74
SPN-205ENST00000563039 POLA1P09884 1462 aaPredicted RBP32.19■■■□□ 2.74
SPN-205ENST00000563039 RUSC2Q8N2Y8 1516 aa32.17■■■□□ 2.74
SPN-205ENST00000563039 WDR62O43379 1518 aa32.16■■■□□ 2.74
SPN-205ENST00000563039 RAD54L2Q9Y4B4 1467 aa32.13■■■□□ 2.73
SPN-205ENST00000563039 CUX2O14529 1486 aa32.02■■■□□ 2.72
SPN-205ENST00000563039 TARBP1Q13395 1621 aaKnown RBP31.94■■■□□ 2.7
SPN-205ENST00000563039 ABCA10Q8WWZ4 1543 aa31.93■■■□□ 2.7
SPN-205ENST00000563039 LOC105371045A0A1W2PR82 267 aa31.89■■■□□ 2.7
SPN-205ENST00000563039 WDR97A6NE52 1622 aa31.88■■■□□ 2.69
SPN-205ENST00000563039 KIF27Q86VH2 1401 aa31.88■■■□□ 2.69
SPN-205ENST00000563039 EEA1Q15075 1411 aa31.88■■■□□ 2.69
SPN-205ENST00000563039 CSRNP3Q8WYN3 585 aa31.87■■■□□ 2.69
SPN-205ENST00000563039 TDRD9Q8NDG6 1382 aaKnown RBP31.86■■■□□ 2.69
SPN-205ENST00000563039 EHMT2Q96KQ7 1210 aa31.82■■■□□ 2.69
SPN-205ENST00000563039 IFT140Q96RY7 1462 aa31.82■■■□□ 2.68
SPN-205ENST00000563039 ZNF608Q9ULD9 1512 aaPredicted RBP31.78■■■□□ 2.68
SPN-205ENST00000563039 IGF1RP08069 1367 aa31.74■■■□□ 2.67
SPN-205ENST00000563039 AQRO60306 1485 aaKnown RBP eCLIP31.74■■■□□ 2.673e-7■■■■■ 36.6
SPN-205ENST00000563039 ABCA5Q8WWZ7 1642 aa31.72■■■□□ 2.67
SPN-205ENST00000563039 GAPVD1Q14C86 1478 aa31.69■■■□□ 2.66
SPN-205ENST00000563039 PRXQ9BXM0 1461 aa31.6■■■□□ 2.65
SPN-205ENST00000563039 EIF4G3O43432 1585 aaKnown RBP31.58■■■□□ 2.65
SPN-205ENST00000563039 RAPGEF2Q9Y4G8 1499 aa31.56■■■□□ 2.64
SPN-205ENST00000563039 KIF21BO75037 1637 aa31.55■■■□□ 2.64
SPN-205ENST00000563039 PBRM1Q86U86 1689 aa31.53■■■□□ 2.64
SPN-205ENST00000563039 CARMIL1Q5VZK9 1371 aa31.53■■■□□ 2.64
SPN-205ENST00000563039 ERICH3Q5RHP9 1530 aa31.52■■■□□ 2.64
SPN-205ENST00000563039 GRIN2BQ13224 1484 aa31.49■■■□□ 2.63
SPN-205ENST00000563039 GOLGA3Q08378 1498 aa31.47■■■□□ 2.63
SPN-205ENST00000563039 UBTFP17480 764 aaKnown RBP31.42■■■□□ 2.62
SPN-205ENST00000563039 CUL7Q14999 1698 aa31.41■■■□□ 2.62
SPN-205ENST00000563039 SNAPC4Q5SXM2 1469 aa31.38■■■□□ 2.61
SPN-205ENST00000563039 ADAMTS12P58397 1594 aa31.34■■■□□ 2.61
SPN-205ENST00000563039 FHAD1B1AJZ9 1412 aa31.32■■■□□ 2.6
SPN-205ENST00000563039 TNIKQ9UKE5 1360 aa31.31■■■□□ 2.6
SPN-205ENST00000563039 MAGI1Q96QZ7 1491 aaPredicted RBP31.25■■■□□ 2.59
SPN-205ENST00000563039 SYNJ2O15056 1496 aa31.17■■■□□ 2.58
SPN-205ENST00000563039 FBLN2P98095 1184 aa31.16■■■□□ 2.58
SPN-205ENST00000563039 RANGAP1P46060 587 aaPredicted RBP31.14■■■□□ 2.58
SPN-205ENST00000563039 CHMP7Q8WUX9 453 aaPredicted RBP31.14■■■□□ 2.58
SPN-205ENST00000563039 CEP162Q5TB80 1403 aa31.13■■■□□ 2.57
SPN-205ENST00000563039 GRIN2AQ12879 1464 aa31.13■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms