Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.043e-7■■■□□ 18.8
XRN2Q9H0D6 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC8.33□□□□□ -1.083e-7■■■□□ 18.8
XRN2Q9H0D6 SETD5-228ENST00000493918 4861 ntTSL 1 (best)7.03□□□□□ -1.283e-7■■■□□ 18.8
XRN2Q9H0D6 SMAD4-213ENST00000591914 992 ntTSL 332.2■■■□□ 2.751e-6■■■□□ 18.8
XRN2Q9H0D6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.321e-6■■■□□ 18.8
XRN2Q9H0D6 AC091551.1-202ENST00000588256 526 ntTSL 422.39■■□□□ 1.171e-6■■■□□ 18.8
XRN2Q9H0D6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.361e-6■■■□□ 18.8
XRN2Q9H0D6 SMAD4-206ENST00000588860 779 ntTSL 49.19□□□□□ -0.941e-6■■■□□ 18.8
XRN2Q9H0D6 SMAD4-210ENST00000590061 544 ntTSL 48.03□□□□□ -1.121e-6■■■□□ 18.8
XRN2Q9H0D6 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.631e-6■■■□□ 18.8
XRN2Q9H0D6 SMAD4-207ENST00000589076 576 ntTSL 53.74□□□□□ -1.811e-6■■■□□ 18.8
XRN2Q9H0D6 ZYX-207ENST00000457235 703 ntTSL 430.23■■■□□ 2.432e-8■■■□□ 18.8
XRN2Q9H0D6 TCEA1-202ENST00000517351 539 ntTSL 430.2■■■□□ 2.432e-8■■■□□ 18.8
XRN2Q9H0D6 LBR-203ENST00000421383 736 ntTSL 329.69■■■□□ 2.342e-8■■■□□ 18.8
XRN2Q9H0D6 TCEA1-209ENST00000521836 625 ntTSL 429.25■■■□□ 2.272e-8■■■□□ 18.8
XRN2Q9H0D6 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC28.29■■■□□ 2.122e-8■■■□□ 18.8
XRN2Q9H0D6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC28.08■■■□□ 2.092e-8■■■□□ 18.8
XRN2Q9H0D6 FAM50A-203ENST00000464419 1470 ntTSL 526.58■■□□□ 1.854e-12■■■□□ 18.8
XRN2Q9H0D6 BLCAP-207ENST00000414080 581 ntTSL 326.43■■□□□ 1.822e-8■■■□□ 18.8
XRN2Q9H0D6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.22■■□□□ 1.792e-8■■■□□ 18.8
XRN2Q9H0D6 ZYX-208ENST00000468083 1146 ntTSL 525.36■■□□□ 1.652e-8■■■□□ 18.8
XRN2Q9H0D6 TCEA1-203ENST00000518310 569 ntTSL 425.33■■□□□ 1.652e-8■■■□□ 18.8
XRN2Q9H0D6 TCEA1-205ENST00000519704 563 ntTSL 424.44■■□□□ 1.52e-8■■■□□ 18.8
XRN2Q9H0D6 TCEA1-210ENST00000522397 852 ntTSL 322.64■■□□□ 1.212e-8■■■□□ 18.8
XRN2Q9H0D6 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC22.51■■□□□ 1.192e-8■■■□□ 18.8
XRN2Q9H0D6 ZYX-206ENST00000449630 533 ntTSL 422■■□□□ 1.112e-8■■■□□ 18.8
XRN2Q9H0D6 BLCAP-210ENST00000445723 588 ntTSL 421.97■■□□□ 1.112e-8■■■□□ 18.8
XRN2Q9H0D6 FAM50A-201ENST00000158526 1240 ntTSL 521.93■■□□□ 1.14e-12■■■□□ 18.8
XRN2Q9H0D6 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.034e-12■■■□□ 18.8
XRN2Q9H0D6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.6■□□□□ 0.892e-8■■■□□ 18.8
XRN2Q9H0D6 ANKMY2-202ENST00000421746 591 ntTSL 420.34■□□□□ 0.852e-8■■■□□ 18.8
XRN2Q9H0D6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.842e-8■■■□□ 18.8
XRN2Q9H0D6 RABGEF1-204ENST00000442563 553 ntTSL 419.62■□□□□ 0.731e-17■■■□□ 18.8
XRN2Q9H0D6 BLCAP-213ENST00000467603 439 ntTSL 319.13■□□□□ 0.652e-8■■■□□ 18.8
XRN2Q9H0D6 NAT9-225ENST00000583834 1993 ntTSL 318.68■□□□□ 0.582e-8■■■□□ 18.8
XRN2Q9H0D6 HM13-220ENST00000492709 1248 ntTSL 518.51■□□□□ 0.553e-7■■■□□ 18.8
XRN2Q9H0D6 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.553e-7■■■□□ 18.8
XRN2Q9H0D6 HM13-213ENST00000469126 756 ntTSL 518.06■□□□□ 0.483e-7■■■□□ 18.8
XRN2Q9H0D6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.02■□□□□ 0.482e-8■■■□□ 18.8
XRN2Q9H0D6 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.452e-8■■■□□ 18.8
XRN2Q9H0D6 NAT9-224ENST00000583757 583 ntTSL 3 BASIC17.73■□□□□ 0.432e-8■■■□□ 18.8
XRN2Q9H0D6 HM13-218ENST00000487281 757 ntTSL 317.7■□□□□ 0.428e-9■■■□□ 18.8
XRN2Q9H0D6 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.69■□□□□ 0.422e-8■■■□□ 18.8
XRN2Q9H0D6 PPFIA1-216ENST00000530746 575 ntTSL 317.56■□□□□ 0.44e-12■■■□□ 18.8
XRN2Q9H0D6 HM13-222ENST00000494153 757 ntTSL 517.55■□□□□ 0.43e-7■■■□□ 18.8
XRN2Q9H0D6 HM13-206ENST00000460389 1075 ntTSL 517.5■□□□□ 0.393e-7■■■□□ 18.8
XRN2Q9H0D6 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.382e-8■■■□□ 18.8
XRN2Q9H0D6 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.342e-8■■■□□ 18.8
XRN2Q9H0D6 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.17■□□□□ 0.342e-8■■■□□ 18.8
XRN2Q9H0D6 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.07■□□□□ 0.322e-8■■■□□ 18.8
XRN2Q9H0D6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.322e-8■■■□□ 18.8
XRN2Q9H0D6 NAT9-215ENST00000581762 744 ntTSL 217■□□□□ 0.312e-8■■■□□ 18.8
XRN2Q9H0D6 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.98■□□□□ 0.312e-8■■■□□ 18.8
XRN2Q9H0D6 NAT9-227ENST00000584022 1103 ntTSL 216.98■□□□□ 0.312e-8■■■□□ 18.8
XRN2Q9H0D6 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.86■□□□□ 0.292e-8■■■□□ 18.8
XRN2Q9H0D6 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.81■□□□□ 0.282e-8■■■□□ 18.8
XRN2Q9H0D6 NAT9-203ENST00000578798 695 ntTSL 316.62■□□□□ 0.252e-8■■■□□ 18.8
XRN2Q9H0D6 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.192e-8■■■□□ 18.8
XRN2Q9H0D6 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.112e-8■■■□□ 18.8
XRN2Q9H0D6 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.12e-8■■■□□ 18.8
XRN2Q9H0D6 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.12e-8■■■□□ 18.8
XRN2Q9H0D6 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.47■□□□□ 0.073e-7■■■□□ 18.8
XRN2Q9H0D6 HM13-211ENST00000468559 675 ntTSL 515.45■□□□□ 0.063e-7■■■□□ 18.8
XRN2Q9H0D6 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.042e-8■■■□□ 18.8
XRN2Q9H0D6 NAT9-204ENST00000578822 839 ntTSL 3 BASIC15.31■□□□□ 0.042e-8■■■□□ 18.8
XRN2Q9H0D6 NAT9-219ENST00000582524 573 ntTSL 4 BASIC15.26■□□□□ 0.032e-8■■■□□ 18.8
XRN2Q9H0D6 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.012e-8■■■□□ 18.8
XRN2Q9H0D6 SEC62-203ENST00000461933 363 ntTSL 215.07■□□□□ 02e-8■■■□□ 18.8
XRN2Q9H0D6 RABGEF1-209ENST00000607882 2654 ntTSL 214.5□□□□□ -0.092e-8■■■□□ 18.8
XRN2Q9H0D6 TCEA1-207ENST00000521086 2966 ntTSL 1 (best)14.49□□□□□ -0.092e-8■■■□□ 18.8
XRN2Q9H0D6 HM13-212ENST00000469097 801 ntTSL 514.24□□□□□ -0.133e-7■■■□□ 18.8
XRN2Q9H0D6 NAT9-207ENST00000579218 583 ntTSL 513.64□□□□□ -0.232e-8■■■□□ 18.8
XRN2Q9H0D6 INSIG1-206ENST00000476756 1320 ntTSL 213.63□□□□□ -0.232e-8■■■□□ 18.8
XRN2Q9H0D6 FAM50A-207ENST00000494278 294 ntTSL 213.6□□□□□ -0.234e-12■■■□□ 18.8
XRN2Q9H0D6 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.241e-17■■■□□ 18.8
XRN2Q9H0D6 RABGEF1-205ENST00000450873 2281 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.451e-17■■■□□ 18.8
XRN2Q9H0D6 HM13-221ENST00000493364 372 ntTSL 212□□□□□ -0.498e-9■■■□□ 18.8
XRN2Q9H0D6 HM13-214ENST00000472128 865 ntTSL 512□□□□□ -0.493e-7■■■□□ 18.8
XRN2Q9H0D6 ANKMY2-204ENST00000453623 587 ntTSL 411.85□□□□□ -0.512e-8■■■□□ 18.8
XRN2Q9H0D6 RABGEF1-208ENST00000510829 3553 ntTSL 5 BASIC11.2□□□□□ -0.621e-17■■■□□ 18.8
XRN2Q9H0D6 MIB1-204ENST00000578646 3306 ntTSL 211.07□□□□□ -0.648e-7■■■□□ 18.8
XRN2Q9H0D6 TCEA1-206ENST00000520534 635 ntTSL 2 BASIC10.87□□□□□ -0.672e-8■■■□□ 18.8
XRN2Q9H0D6 ANKMY2-203ENST00000447802 2599 ntTSL 210.46□□□□□ -0.742e-8■■■□□ 18.8
XRN2Q9H0D6 TCEA1-204ENST00000518784 586 ntTSL 2 BASIC10.41□□□□□ -0.742e-8■■■□□ 18.8
XRN2Q9H0D6 LBR-205ENST00000425080 874 ntTSL 310.39□□□□□ -0.752e-8■■■□□ 18.8
XRN2Q9H0D6 ANKMY2-205ENST00000627859 210 ntTSL 5 BASIC10.36□□□□□ -0.752e-8■■■□□ 18.8
XRN2Q9H0D6 HM13-204ENST00000398174 3792 ntTSL 1 (best) BASIC10.27□□□□□ -0.763e-7■■■□□ 18.8
XRN2Q9H0D6 RABGEF1-201ENST00000284957 3733 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.811e-17■■■□□ 18.8
XRN2Q9H0D6 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.872e-8■■■□□ 18.8
XRN2Q9H0D6 SEC62-207ENST00000480708 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.892e-8■■■□□ 18.8
XRN2Q9H0D6 HM13-225ENST00000619859 455 ntTSL 38.14□□□□□ -1.114e-8■■■□□ 18.8
XRN2Q9H0D6 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.152e-8■■■□□ 18.8
XRN2Q9H0D6 SEC62-204ENST00000469515 785 ntTSL 37.15□□□□□ -1.262e-8■■■□□ 18.8
XRN2Q9H0D6 SEC62-208ENST00000481435 627 ntTSL 26.12□□□□□ -1.432e-8■■■□□ 18.8
XRN2Q9H0D6 SEC62-202ENST00000460513 641 ntTSL 54.3□□□□□ -1.722e-8■■■□□ 18.8
XRN2Q9H0D6 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.842e-8■■■□□ 18.8
XRN2Q9H0D6 SEC62-209ENST00000487736 508 ntTSL 52.8□□□□□ -1.962e-8■■■□□ 18.8
XRN2Q9H0D6 BCAR1-215ENST00000564028 558 ntTSL 419.44■□□□□ 0.76e-7■■■□□ 18.8
XRN2Q9H0D6 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.096e-14■■■□□ 18.8
XRN2Q9H0D6 SLC6A8-207ENST00000466243 544 ntTSL 216.19■□□□□ 0.182e-8■■■□□ 18.8
Retrieved 100 of 21,068 protein–RNA pairs in 106.1 ms