RNA–Protein interactions for RNA: ENST00000393600.7

FAM50A-202, Transcript of family with sequence similarity 50 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM50A, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM50A-202ENST00000393600 NISCHQ9Y2I1 1504 aa45.06■■■■■ 4.8
FAM50A-202ENST00000393600 CCDC180Q9P1Z9 1646 aa39.9■■■■□ 3.98
FAM50A-202ENST00000393600 ABCC9O60706 1549 aa39.15■■■■□ 3.86
FAM50A-202ENST00000393600 ZCCHC6Q5VYS8 1495 aaKnown RBP37.58■■■■□ 3.61
FAM50A-202ENST00000393600 RB1CC1Q8TDY2 1594 aa37.52■■■■□ 3.6
FAM50A-202ENST00000393600 DCAF8L2P0C7V8 631 aa37.51■■■■□ 3.59
FAM50A-202ENST00000393600 NACADO15069 1562 aa37.5■■■■□ 3.59
FAM50A-202ENST00000393600 MYO15BQ96JP2 1530 aa37.31■■■■□ 3.56
FAM50A-202ENST00000393600 DCAF1Q9Y4B6 1507 aa37.2■■■■□ 3.55
FAM50A-202ENST00000393600 UNC13AQ9UPW8 1703 aa36.8■■■■□ 3.48
FAM50A-202ENST00000393600 PABPN1Q86U42 306 aaKnown RBP eCLIP36.64■■■■□ 3.461e-6■■■□□ 17.1
FAM50A-202ENST00000393600 BICRAQ9NZM4 1560 aa36.62■■■■□ 3.45
FAM50A-202ENST00000393600 SCRIBQ14160 1630 aa36.56■■■■□ 3.44
FAM50A-202ENST00000393600 DNAJC5BQ9UF47 199 aa36.05■■■■□ 3.36
FAM50A-202ENST00000393600 SHROOM4Q9ULL8 1493 aa35.96■■■■□ 3.35
FAM50A-202ENST00000393600 EIF4G1Q04637 1599 aaKnown RBP35.54■■■■□ 3.28
FAM50A-202ENST00000393600 CC2D2AQ9P2K1 1620 aa35.37■■■■□ 3.25
FAM50A-202ENST00000393600 CECR2Q9BXF3 1484 aa35.24■■■■□ 3.23
FAM50A-202ENST00000393600 SMARCA4P51532 1647 aa34.94■■■■□ 3.18
FAM50A-202ENST00000393600 MROH2BQ7Z745 1585 aa34.82■■■■□ 3.17
FAM50A-202ENST00000393600 BAZ1AQ9NRL2 1556 aaPredicted RBP34.82■■■■□ 3.17
FAM50A-202ENST00000393600 ATAD2BQ9ULI0 1458 aa34.77■■■■□ 3.16
FAM50A-202ENST00000393600 NCAPD3P42695 1498 aa34.69■■■■□ 3.14
FAM50A-202ENST00000393600 SMARCA2P51531 1590 aa34.58■■■■□ 3.13
FAM50A-202ENST00000393600 PEG3Q9GZU2 1588 aa34.58■■■■□ 3.13
FAM50A-202ENST00000393600 HMGXB3Q12766 1538 aa34.49■■■■□ 3.11
FAM50A-202ENST00000393600 RSF1Q96T23 1441 aaPredicted RBP34.41■■■■□ 3.1
FAM50A-202ENST00000393600 WIZO95785 1651 aa34.4■■■■□ 3.1
FAM50A-202ENST00000393600 BAZ1BQ9UIG0 1483 aaKnown RBP34.39■■■■□ 3.1
FAM50A-202ENST00000393600 TOP2AP11388 1531 aaKnown RBP33.98■■■■□ 3.03
FAM50A-202ENST00000393600 NESP48681 1621 aa33.98■■■■□ 3.03
FAM50A-202ENST00000393600 LAMC3Q9Y6N6 1575 aa33.67■■■□□ 2.98
FAM50A-202ENST00000393600 CADPSQ9ULU8 1353 aa33.66■■■□□ 2.98
FAM50A-202ENST00000393600 CCDC88BA6NC98 1476 aa33.63■■■□□ 2.97
FAM50A-202ENST00000393600 ERCC6Q03468 1493 aa33.58■■■□□ 2.97
FAM50A-202ENST00000393600 CFTRP13569 1480 aa33.51■■■□□ 2.96
FAM50A-202ENST00000393600 SUPT5HO00267 1087 aaKnown RBP33.5■■■□□ 2.95
FAM50A-202ENST00000393600 KIF21AQ7Z4S6 1674 aa33.46■■■□□ 2.95
FAM50A-202ENST00000393600 PDS5BQ9NTI5 1447 aa33.42■■■□□ 2.94
FAM50A-202ENST00000393600 THOC2Q8NI27 1593 aaKnown RBP33.38■■■□□ 2.93
FAM50A-202ENST00000393600 FANCD2Q9BXW9 1451 aa33.3■■■□□ 2.92
FAM50A-202ENST00000393600 CUX2O14529 1486 aa33.22■■■□□ 2.91
FAM50A-202ENST00000393600 CEP164Q9UPV0 1460 aa33.19■■■□□ 2.9
FAM50A-202ENST00000393600 MRC2Q9UBG0 1479 aa33.17■■■□□ 2.9
FAM50A-202ENST00000393600 PRDM2Q13029 1718 aa33.12■■■□□ 2.89
FAM50A-202ENST00000393600 WDR62O43379 1518 aa33.1■■■□□ 2.89
FAM50A-202ENST00000393600 URB2Q14146 1524 aaKnown RBP33.06■■■□□ 2.88
FAM50A-202ENST00000393600 TOPBP1Q92547 1522 aa32.8■■■□□ 2.84
FAM50A-202ENST00000393600 DNMBPQ6XZF7 1577 aa32.71■■■□□ 2.83
FAM50A-202ENST00000393600 CUX1P39880 1505 aa32.65■■■□□ 2.82
FAM50A-202ENST00000393600 ABCC8Q09428 1581 aa32.59■■■□□ 2.81
FAM50A-202ENST00000393600 POLA1P09884 1462 aaPredicted RBP32.55■■■□□ 2.8
FAM50A-202ENST00000393600 ZNF608Q9ULD9 1512 aaPredicted RBP32.52■■■□□ 2.8
FAM50A-202ENST00000393600 IFT140Q96RY7 1462 aa32.49■■■□□ 2.79
FAM50A-202ENST00000393600 TARBP1Q13395 1621 aaKnown RBP32.46■■■□□ 2.79
FAM50A-202ENST00000393600 FGD5Q6ZNL6 1462 aa32.46■■■□□ 2.79
FAM50A-202ENST00000393600 RAD54L2Q9Y4B4 1467 aa32.46■■■□□ 2.79
FAM50A-202ENST00000393600 SYNJ1O43426 1573 aa32.38■■■□□ 2.77
FAM50A-202ENST00000393600 WRNQ14191 1432 aaPredicted RBP eCLIP32.34■■■□□ 2.77
FAM50A-202ENST00000393600 SOGA1O94964 1423 aa32.33■■■□□ 2.77
FAM50A-202ENST00000393600 AQRO60306 1485 aaKnown RBP eCLIP32.29■■■□□ 2.762e-12■■■■■ 73.6
FAM50A-202ENST00000393600 EIF4G3O43432 1585 aaKnown RBP32.29■■■□□ 2.76
FAM50A-202ENST00000393600 TOP2BQ02880 1626 aa32.27■■■□□ 2.76
FAM50A-202ENST00000393600 BIVM-ERCC5R4GMW8 1640 aa32.27■■■□□ 2.76
FAM50A-202ENST00000393600 TDRD9Q8NDG6 1382 aaKnown RBP32.23■■■□□ 2.75
FAM50A-202ENST00000393600 WDR97A6NE52 1622 aa32.2■■■□□ 2.75
FAM50A-202ENST00000393600 DNAJC5Q9H3Z4 198 aa32.19■■■□□ 2.74
FAM50A-202ENST00000393600 ABCA10Q8WWZ4 1543 aa32.12■■■□□ 2.73
FAM50A-202ENST00000393600 ABCA5Q8WWZ7 1642 aa32.02■■■□□ 2.72
FAM50A-202ENST00000393600 GAPVD1Q14C86 1478 aa31.97■■■□□ 2.71
FAM50A-202ENST00000393600 SNAPC4Q5SXM2 1469 aa31.97■■■□□ 2.71
FAM50A-202ENST00000393600 GRIN2BQ13224 1484 aa31.93■■■□□ 2.7
FAM50A-202ENST00000393600 PBRM1Q86U86 1689 aa31.88■■■□□ 2.69
FAM50A-202ENST00000393600 CHD1O14646 1710 aa31.84■■■□□ 2.69
FAM50A-202ENST00000393600 MAGI1Q96QZ7 1491 aaPredicted RBP31.82■■■□□ 2.68
FAM50A-202ENST00000393600 OSCARQ8IYS5 282 aa31.81■■■□□ 2.68
FAM50A-202ENST00000393600 FBLN2P98095 1184 aa31.74■■■□□ 2.67
FAM50A-202ENST00000393600 SYNJ2O15056 1496 aa31.73■■■□□ 2.67
FAM50A-202ENST00000393600 ADAMTS12P58397 1594 aa31.71■■■□□ 2.67
FAM50A-202ENST00000393600 ERICH3Q5RHP9 1530 aa31.68■■■□□ 2.66
FAM50A-202ENST00000393600 CHMP7Q8WUX9 453 aaPredicted RBP31.63■■■□□ 2.65
FAM50A-202ENST00000393600 RUSC2Q8N2Y8 1516 aa31.6■■■□□ 2.65
FAM50A-202ENST00000393600 IGF1RP08069 1367 aa31.6■■■□□ 2.65
FAM50A-202ENST00000393600 KIF27Q86VH2 1401 aa31.59■■■□□ 2.65
FAM50A-202ENST00000393600 FHAD1B1AJZ9 1412 aa31.59■■■□□ 2.65
FAM50A-202ENST00000393600 GRIN2AQ12879 1464 aa31.57■■■□□ 2.64
FAM50A-202ENST00000393600 CLASP1Q7Z460 1538 aa31.57■■■□□ 2.64
FAM50A-202ENST00000393600 TRIM41Q8WV44 630 aa31.53■■■□□ 2.64
FAM50A-202ENST00000393600 CEP170Q5SW79 1584 aa31.49■■■□□ 2.63
FAM50A-202ENST00000393600 NUP160Q12769 1436 aa31.46■■■□□ 2.63
FAM50A-202ENST00000393600 ARHGEF11O15085 1522 aa31.44■■■□□ 2.62
FAM50A-202ENST00000393600 RIMBP3CA6NJZ7 1639 aa31.44■■■□□ 2.62
FAM50A-202ENST00000393600 RIMBP3BA6NNM3 1639 aa31.44■■■□□ 2.62
FAM50A-202ENST00000393600 RIMBP3Q9UFD9 1639 aa31.44■■■□□ 2.62
FAM50A-202ENST00000393600 CHIC1Q5VXU3 224 aa31.36■■■□□ 2.61
FAM50A-202ENST00000393600 CUL7Q14999 1698 aa31.35■■■□□ 2.61
FAM50A-202ENST00000393600 CARMIL1Q5VZK9 1371 aa31.33■■■□□ 2.61
FAM50A-202ENST00000393600 ERCC6L2Q5T890 1561 aa31.26■■■□□ 2.6
FAM50A-202ENST00000393600 ARAP1Q96P48 1450 aa31.26■■■□□ 2.59
FAM50A-202ENST00000393600 SHROOM2Q13796 1616 aa31.2■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms