RNA–Protein interactions for RNA: ENST00000272163.8

LBR-201, Transcript of lamin B receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LBR, Length 3,745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-201ENST00000272163 NISCHQ9Y2I1 1504 aa18.49■□□□□ 0.55
LBR-201ENST00000272163 DCAF8L2P0C7V8 631 aa16.78■□□□□ 0.28
LBR-201ENST00000272163 ABCC9O60706 1549 aa16.65■□□□□ 0.26
LBR-201ENST00000272163 CCDC180Q9P1Z9 1646 aa16.18■□□□□ 0.18
LBR-201ENST00000272163 PABPN1Q86U42 306 aaKnown RBP eCLIP15.8■□□□□ 0.12
LBR-201ENST00000272163 RB1CC1Q8TDY2 1594 aa15.69■□□□□ 0.1
LBR-201ENST00000272163 NACADO15069 1562 aa15.54■□□□□ 0.08
LBR-201ENST00000272163 SHROOM4Q9ULL8 1493 aa15.29■□□□□ 0.04
LBR-201ENST00000272163 ZCCHC6Q5VYS8 1495 aaKnown RBP15.26■□□□□ 0.03
LBR-201ENST00000272163 DNAJC5BQ9UF47 199 aa15.19■□□□□ 0.02
LBR-201ENST00000272163 SCRIBQ14160 1630 aa15.17■□□□□ 0.02
LBR-201ENST00000272163 MYO15BQ96JP2 1530 aa15.15■□□□□ 0.02
LBR-201ENST00000272163 DCAF1Q9Y4B6 1507 aa15.06■□□□□ 0
LBR-201ENST00000272163 CECR2Q9BXF3 1484 aa14.91□□□□□ -0.02
LBR-201ENST00000272163 BICRAQ9NZM4 1560 aa14.77□□□□□ -0.04
LBR-201ENST00000272163 EIF4G1Q04637 1599 aaKnown RBP14.7□□□□□ -0.06
LBR-201ENST00000272163 CC2D2AQ9P2K1 1620 aa14.66□□□□□ -0.06
LBR-201ENST00000272163 UNC13AQ9UPW8 1703 aa14.65□□□□□ -0.06
LBR-201ENST00000272163 ERCC6Q03468 1493 aa14.61□□□□□ -0.07
LBR-201ENST00000272163 SUPT5HO00267 1087 aaKnown RBP14.6□□□□□ -0.07
LBR-201ENST00000272163 BAZ1BQ9UIG0 1483 aaKnown RBP14.51□□□□□ -0.09
LBR-201ENST00000272163 BAZ1AQ9NRL2 1556 aaPredicted RBP14.44□□□□□ -0.1
LBR-201ENST00000272163 SMARCA2P51531 1590 aa14.44□□□□□ -0.1
LBR-201ENST00000272163 ATAD2BQ9ULI0 1458 aa14.41□□□□□ -0.1
LBR-201ENST00000272163 NCAPD3P42695 1498 aa14.38□□□□□ -0.11
LBR-201ENST00000272163 PDS5BQ9NTI5 1447 aa14.31□□□□□ -0.12
LBR-201ENST00000272163 SMARCA4P51532 1647 aa14.28□□□□□ -0.12
LBR-201ENST00000272163 MROH2BQ7Z745 1585 aa14.25□□□□□ -0.13
LBR-201ENST00000272163 CADPSQ9ULU8 1353 aa14.2□□□□□ -0.14
LBR-201ENST00000272163 FBLN2P98095 1184 aa14.19□□□□□ -0.14
LBR-201ENST00000272163 RSF1Q96T23 1441 aaPredicted RBP14.16□□□□□ -0.14
LBR-201ENST00000272163 HMGXB3Q12766 1538 aa14.15□□□□□ -0.14
LBR-201ENST00000272163 NESP48681 1621 aa14.14□□□□□ -0.15
LBR-201ENST00000272163 TRIM41Q8WV44 630 aa14.06□□□□□ -0.16
LBR-201ENST00000272163 CEP164Q9UPV0 1460 aa14.04□□□□□ -0.16
LBR-201ENST00000272163 CUX2O14529 1486 aa14.02□□□□□ -0.16
LBR-201ENST00000272163 DNAJC5Q9H3Z4 198 aa14.02□□□□□ -0.17
LBR-201ENST00000272163 WIZO95785 1651 aa14.01□□□□□ -0.17
LBR-201ENST00000272163 FANCD2Q9BXW9 1451 aa13.99□□□□□ -0.17
LBR-201ENST00000272163 OSCARQ8IYS5 282 aa13.98□□□□□ -0.17
LBR-201ENST00000272163 LAMC3Q9Y6N6 1575 aa13.97□□□□□ -0.17
LBR-201ENST00000272163 MRC2Q9UBG0 1479 aa13.94□□□□□ -0.18
LBR-201ENST00000272163 CHMP7Q8WUX9 453 aaPredicted RBP13.93□□□□□ -0.18
LBR-201ENST00000272163 TOP2AP11388 1531 aaKnown RBP13.92□□□□□ -0.18
LBR-201ENST00000272163 PEG3Q9GZU2 1588 aa13.9□□□□□ -0.18
LBR-201ENST00000272163 FAM9AQ8IZU1 332 aaPredicted RBP13.89□□□□□ -0.19
LBR-201ENST00000272163 CCDC88BA6NC98 1476 aa13.88□□□□□ -0.19
LBR-201ENST00000272163 CFTRP13569 1480 aa13.84□□□□□ -0.19
LBR-201ENST00000272163 TRHP20396 242 aaPredicted RBP13.81□□□□□ -0.2
LBR-201ENST00000272163 TTBK1Q5TCY1 1321 aaPredicted RBP13.79□□□□□ -0.2
LBR-201ENST00000272163 ABCC8Q09428 1581 aa13.78□□□□□ -0.2
LBR-201ENST00000272163 TDRD9Q8NDG6 1382 aaKnown RBP13.75□□□□□ -0.21
LBR-201ENST00000272163 SOGA1O94964 1423 aa13.74□□□□□ -0.21
LBR-201ENST00000272163 CYB5RLQ6IPT4 315 aa13.74□□□□□ -0.21
LBR-201ENST00000272163 NPM1P06748 294 aaKnown RBP eCLIP13.69□□□□□ -0.22
LBR-201ENST00000272163 IFT140Q96RY7 1462 aa13.69□□□□□ -0.22
LBR-201ENST00000272163 KIF21AQ7Z4S6 1674 aa13.65□□□□□ -0.22
LBR-201ENST00000272163 AQRO60306 1485 aaKnown RBP eCLIP13.62□□□□□ -0.233e-7■■■■□ 23.2
LBR-201ENST00000272163 TOPBP1Q92547 1522 aa13.62□□□□□ -0.23
LBR-201ENST00000272163 WRNQ14191 1432 aaPredicted RBP eCLIP13.62□□□□□ -0.23
LBR-201ENST00000272163 URB2Q14146 1524 aaKnown RBP13.62□□□□□ -0.23
LBR-201ENST00000272163 EHMT2Q96KQ7 1210 aa13.61□□□□□ -0.23
LBR-201ENST00000272163 WDR62O43379 1518 aa13.59□□□□□ -0.23
LBR-201ENST00000272163 RANGAP1P46060 587 aaPredicted RBP13.59□□□□□ -0.23
LBR-201ENST00000272163 RAD54L2Q9Y4B4 1467 aa13.57□□□□□ -0.24
LBR-201ENST00000272163 THOC2Q8NI27 1593 aaKnown RBP13.56□□□□□ -0.24
LBR-201ENST00000272163 FGD5Q6ZNL6 1462 aa13.54□□□□□ -0.24
LBR-201ENST00000272163 DNMBPQ6XZF7 1577 aa13.52□□□□□ -0.24
LBR-201ENST00000272163 ZNF608Q9ULD9 1512 aaPredicted RBP13.52□□□□□ -0.24
LBR-201ENST00000272163 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.51□□□□□ -0.25
LBR-201ENST00000272163 HNRNPUL2Q1KMD3 747 aaKnown RBP13.51□□□□□ -0.25
LBR-201ENST00000272163 POLA1P09884 1462 aaPredicted RBP13.51□□□□□ -0.25
LBR-201ENST00000272163 GRIN2BQ13224 1484 aa13.48□□□□□ -0.25
LBR-201ENST00000272163 GAPVD1Q14C86 1478 aa13.48□□□□□ -0.25
LBR-201ENST00000272163 ATP1B4Q9UN42 357 aaPredicted RBP13.47□□□□□ -0.25
LBR-201ENST00000272163 UBTFP17480 764 aaKnown RBP13.44□□□□□ -0.26
LBR-201ENST00000272163 KIF27Q86VH2 1401 aa13.44□□□□□ -0.26
LBR-201ENST00000272163 SNAPC4Q5SXM2 1469 aa13.42□□□□□ -0.26
LBR-201ENST00000272163 JPH4Q96JJ6 628 aa13.41□□□□□ -0.26
LBR-201ENST00000272163 AEBP2Q6ZN18 517 aaPredicted RBP13.39□□□□□ -0.27
LBR-201ENST00000272163 CUX1P39880 1505 aa13.35□□□□□ -0.27
LBR-201ENST00000272163 MAGI1Q96QZ7 1491 aaPredicted RBP13.34□□□□□ -0.27
LBR-201ENST00000272163 CARMIL1Q5VZK9 1371 aa13.32□□□□□ -0.28
LBR-201ENST00000272163 SYNJ2O15056 1496 aa13.32□□□□□ -0.28
LBR-201ENST00000272163 FHAD1B1AJZ9 1412 aa13.31□□□□□ -0.28
LBR-201ENST00000272163 P3H3Q8IVL6 736 aa13.31□□□□□ -0.28
LBR-201ENST00000272163 ARID3CA6NKF2 412 aa13.29□□□□□ -0.28
LBR-201ENST00000272163 SYNJ1O43426 1573 aa13.29□□□□□ -0.28
LBR-201ENST00000272163 EIF4G3O43432 1585 aaKnown RBP13.29□□□□□ -0.28
LBR-201ENST00000272163 CSRNP3Q8WYN3 585 aa13.28□□□□□ -0.28
LBR-201ENST00000272163 CARMIL2Q6F5E8 1435 aa13.28□□□□□ -0.28
LBR-201ENST00000272163 MYT1LQ9UL68 1186 aa13.28□□□□□ -0.28
LBR-201ENST00000272163 ABCA10Q8WWZ4 1543 aa13.26□□□□□ -0.29
LBR-201ENST00000272163 FAM69CQ0P6D2 419 aa13.25□□□□□ -0.29
LBR-201ENST00000272163 KCNH8Q96L42 1107 aa13.23□□□□□ -0.29
LBR-201ENST00000272163 PRDM2Q13029 1718 aa13.23□□□□□ -0.29
LBR-201ENST00000272163 ARHGEF11O15085 1522 aa13.23□□□□□ -0.29
LBR-201ENST00000272163 PRG4Q92954 1404 aaPredicted RBP13.22□□□□□ -0.29
LBR-201ENST00000272163 PTPRGP23470 1445 aa13.2□□□□□ -0.3
LBR-201ENST00000272163 GRIN2AQ12879 1464 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms